All Stories

  1. Crisis as Catalyst: The future of the NIH driving scientific discovery

    Article • The Journal of Infectious Diseases, July 2026, Oxford University Press (OUP)

    Javeed Shah

  2. Understanding the cervicovaginal immune response to Lactobacillus crispatus CTV-05

    Article • The Lancet Microbe, June 2026, Elsevier

    Javeed Shah

  3. Veteran Mental Health Emergency Care Utilization Following SARS‐CoV‐2 Infection

    Article • Health Services Research, June 2025, Wiley

    Javeed Shah

  4. Epidemiology, Immunology and Clinical Characteristics of COVID-19 (EPIC3)—Database of a prospective longitudinal observational study within the Veterans Health Administration

    Article • Frontiers in Public Health, June 2025, Frontiers

    Javeed Shah

  5. Reply to Yu et al

    Article • The Journal of Infectious Diseases, May 2025, Oxford University Press (OUP)

    Javeed Shah

  6. Peripheral blood cytokine profiles predict the severity of SARS-CoV-2 infection: an EPIC3 study analysis

    Article • BMC Infectious Diseases, May 2025, Springer Science + Business Media

    Javeed Shah

  7. Performance of Xpert MTB/RIF ultra for the diagnosis of tuberculous meningitis in children using cerebrospinal fluid

    Article • Scientific Reports, April 2025, Springer Science + Business Media

    Javeed Shah

  8. BCG induced innate immune response heterogeneity and susceptibility to pediatric tuberculosis

    Article • The Journal of Immunology, April 2025, Oxford University Press (OUP)

    Javeed Shah

  9. Diminished Mycobacterium tuberculosis–specific T-cell Responses During Pregnancy in Women With HIV and Receiving Isoniazid Preventive Therapy

    Article • Open Forum Infectious Diseases, January 2025, Oxford University Press (OUP)

    Javeed Shah

  10. Bacterial Vaginosis Is Associated With Transcriptomic Changes but Not Higher Concentrations of Cervical Leukocytes in a Study of Women at High Risk for Human Immunodeficiency Virus Acquisition

    Article • The Journal of Infectious Diseases, January 2025, Oxford University Press (OUP)

    Javeed Shah

  11. 1990-LB: Associations of SARS-CoV-2 Infection with Incident Diabetes among U.S. Veterans in a Longitudinal Observational Cohort

    Article • Diabetes, June 2024, American Diabetes Association

    Javeed Shah

  12. Regional variation in financial hardship among US veterans during the COVID-19 pandemic

    Article • Health Affairs Scholar, May 2024, Oxford University Press (OUP)

    Javeed Shah

  13. Risk of Potentially Preventable Hospitalizations After SARS-CoV-2 Infection

    Article • JAMA Network Open, April 2024, American Medical Association (AMA)

    Javeed Shah

  14. TOLLIP inhibits lipid accumulation and the integrated stress response in alveolar macrophages to control Mycobacterium tuberculosis infection

    Article • Nature Microbiology, March 2024, Springer Science + Business Media

    Javeed Shah

  15. Self-Reported Everyday Functioning After COVID-19 Infection

    Article • JAMA Network Open, March 2024, American Medical Association (AMA)

    Javeed Shah

  16. Changes in Outpatient Health Care Use After COVID-19 Infection Among Veterans

    Article • JAMA Network Open, February 2024, American Medical Association (AMA)

    Javeed Shah

  17. Vaginal Microbiota Linked to HIV Acquisition Risk Are Not Associated with Changes in Concentrations of Cervical Dendritic Cells and CD4+ T Cells

    Article • American Journal of Obstetrics and Gynecology, February 2024, Elsevier

    Javeed Shah

  18. Molecular detection of pre-ribosomal RNAs of Mycobacterium bovis bacille Calmette-Guérin and Mycobacterium tuberculosis to enhance pre-clinical tuberculosis drug and vaccine development

    Article • Diagnostic Microbiology and Infectious Disease, January 2024, Elsevier

    Javeed Shah

  19. Late Mortality After COVID-19 Infection Among US Veterans vs Risk-Matched Comparators

    Article • JAMA Internal Medicine, October 2023, American Medical Association (AMA)

    Javeed Shah

  20. Early Outcomes of SARS-CoV-2 Infection in a Multisite Prospective Cohort of Inpatient Veterans

    Article • Open Forum Infectious Diseases, June 2023, Oxford University Press (OUP)

    Javeed Shah

  21. MUC5AC Genetic Variation Is Associated With Tuberculous Meningitis Cerebral Spinal Fluid Cytokine Responses and Mortality

    Article • The Journal of Infectious Diseases, February 2023, Oxford University Press (OUP)

    Javeed Shah

  22. Complexity and Challenges of the Clinical Diagnosis and Management of Long COVID

    Article • JAMA Network Open, November 2022, American Medical Association (AMA)

    Javeed Shah

  23. T-cell deficiency and hyperinflammatory monocyte responses associate with Mycobacterium avium complex lung disease

    Article • Frontiers in Immunology, October 2022, Frontiers

    Javeed Shah

  24. TOLLIP Optimizes Dendritic Cell Maturation to Lipopolysaccharide and Mycobacterium tuberculosis

    Article • The Journal of Immunology, August 2022, The American Association of Immunologists

    Javeed Shah

  25. A CD4+ TNF+ monofunctional memory T-cell response to BCG vaccination is associated with Mycobacterium tuberculosis infection in infants exposed to HIV

    Article • EBioMedicine, June 2022, Elsevier

    Javeed Shah

  26. Mycobacterium tuberculosis infection, immune activation, and risk of HIV acquisition

    Article • PLOS One, May 2022, PLOS

    Javeed Shah

  27. Peripheral blood T-cell deficiency and hyperinflammatory monocyte responses associate with MAC lung disease

    Article • March 2022, Cold Spring Harbor Laboratory Press

    Javeed Shah

  28. REL and BHLHE40 Variants Are Associated with IL-12 and IL-10 Responses and Tuberculosis Risk

    Article • The Journal of Immunology, March 2022, The American Association of Immunologists

    Javeed Shah

  29. Mycobacterium tuberculosis-Specific T-Cell Responses Are Impaired During Late Pregnancy With Elevated Biomarkers of Tuberculosis Risk Postpartum

    Article • The Journal of Infectious Diseases, December 2021, Oxford University Press (OUP)

    Javeed Shah

  30. Age differences in the association of comorbid burden with adverse outcomes in SARS-CoV-2

    Article • BMC Geriatrics, July 2021, Springer Science + Business Media

    Javeed Shah

  31. Mycobacterium tuberculosis-specific T cell responses are impaired during late pregnancy with elevated biomarkers of tuberculosis risk postpartum

    Article • June 2021, Cold Spring Harbor Laboratory Press

    Javeed Shah

  32. Cirrhosis and Severe Acute Respiratory Syndrome Coronavirus 2 Infection in US Veterans: Risk of Infection, Hospitalization, Ventilation, and Mortality

    Article • Hepatology, June 2021, Wolters Kluwer Health

    Javeed Shah

  33. Trends Over Time in the Risk of Adverse Outcomes Among Patients With Severe Acute Respiratory Syndrome Coronavirus 2 Infection

    Article • Clinical Infectious Diseases, May 2021, Oxford University Press (OUP)

    Javeed Shah

  34. BMI and Outcomes of SARS‐CoV‐2 Among US Veterans

    Article • Obesity, March 2021, Wiley

    Javeed Shah

  35. Trends over time in the risk of adverse outcomes among patients with SARS-CoV-2 infection

    Article • March 2021, Cold Spring Harbor Laboratory Press

    Javeed Shah

  36. CNBP, REL, and BHLHE40 variants are associated with IL-12 and IL-10 responses and tuberculosis risk

    Article • March 2021, Cold Spring Harbor Laboratory Press

    Javeed Shah

  37. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1

    Article • Autophagy, January 2021, Taylor & Francis

    MD, PhD Pierre-Louis Tharaux, Joilson O. Martins, Dr. rer. nat. Marc Herb, Dr Marcia R Cominetti, Alessio Di Fonzo, Christoph Gerhardt, Dr Mustafa Sahin, Dr Cinzia Volonté, Dr Marc Etienne Poirot, Professor Paula I. Moreira, Executive Director, The Hormel Institute Robert Clarke, Prof Robert Bryson-Richardson, Professor Hyun Kyu Song, Prof Claudia Cavadas, Professor Po Sing Leung, Paula Ludovico, Javeed Shah, Prof. Dr. Giovanni Di Guardo, Dr Takeshi Noda, Professor Tullio Florio, Professor Kevin Coombs, Ning Chen, Maria Vaccaro, Dr Jorge F Quarleri, Professor hengyi xiao, Dr. Yanzhuang Wang, Prof Giacinto Bagetta, Dr. Ann M Wehman, Dr Pawan Sharma, Dr Anna Krasnodembskaya, Dr Francesca Finetti, Nicoletta Filigheddu, Professor Javier González-Gallego, Professor Günther Weindl, Professor Nektarios Tavernarakis, Jie Chao

  38. Risk Factors for Testing Positive for Severe Acute Respiratory Syndrome Coronavirus 2 in a National United States Healthcare System

    Article • Clinical Infectious Diseases, October 2020, Oxford University Press (OUP)

    Javeed Shah

  39. Risk Factors for Hospitalization, Mechanical Ventilation, or Death Among 10 131 US Veterans With SARS-CoV-2 Infection

    Article • JAMA Network Open, September 2020, American Medical Association (AMA)

    Javeed Shah

  40. TOLLIP resolves lipid-induced EIF2 signaling in alveolar macrophages for durable Mycobacterium tuberculosis protection

    Article • August 2020, Cold Spring Harbor Laboratory Press

    Javeed Shah

  41. Correction: Toll-like receptor chaperone HSP90B1 and the immune response to Mycobacteria

    Article • PLOS One, July 2020, PLOS

    Javeed Shah

  42. Bovine Tuberculosis: A Re-emerging Zoonotic Infection

    Article • Journal of Agromedicine, June 2020, Taylor & Francis

    Javeed Shah

  43. TOLLIP deficiency is associated with increased resistance to Legionella pneumophila pneumonia

    Article • Mucosal Immunology, November 2019, Elsevier

    Javeed Shah

  44. Nontuberculous Mycobacteria and Heterologous Immunity to Tuberculosis

    Article • The Journal of Infectious Diseases, June 2019, Oxford University Press (OUP)

    Javeed Shah

  45. Toll-like receptor chaperone HSP90B1 and the immune response to Mycobacteria

    Article • PLOS One, December 2018, PLOS

    Javeed Shah

  46. Evaluation of Xpert MTB/RIF assay for detection of Mycobacterium tuberculosis in stool samples of adults with pulmonary tuberculosis

    Article • PLOS One, September 2018, PLOS

    Javeed Shah

  47. Washington state satellite HIV clinic program: a model for delivering highly effective decentralized care in under-resourced communities

    Article • AIDS Care, May 2018, Taylor & Francis

    Javeed Shah

  48. The common HAQ STING variant impairs cGAS-dependent antibacterial responses and is associated with susceptibility to Legionnaires’ disease in humans

    Article • PLoS Pathogens, January 2018, PLOS

    Javeed Shah

  49. Tuberculous meningitis

    Article • Nature Reviews Neurology, September 2017, Springer Science + Business Media

    Javeed Shah

  50. A common genetic variant in the TOLLIP gene is associated with BCG vaccine responses in infants.

    Article • American Review of Respiratory Disease, August 2017, American Thoracic Society

    Javeed Shah

  51. Species-Specific Risk Factors, Treatment Decisions and Clinical Outcomes for Laboratory Isolates of Less Common Nontuberculous Mycobacteria in Washington State

    Article • Annals of the American Thoracic Society, April 2017, American Thoracic Society

    Javeed Shah

  52. Human ULK1 Variation and Susceptibility toMycobacterium tuberculosisInfection

    Article • The Journal of Infectious Diseases, August 2016, Oxford University Press (OUP)

    Javeed Shah

  53. GeneXpert MTB/Rif to Diagnose Tuberculous Meningitis: Perhaps the First Test but not the Last

    Article • Clinical Infectious Diseases, March 2016, Oxford University Press (OUP)

    Javeed Shah

  54. Genetic Variation in Toll-Interacting Protein Is Associated With Leprosy Susceptibility and Cutaneous Expression of Interleukin 1 Receptor Antagonist

    Article • The Journal of Infectious Diseases, November 2015, Oxford University Press (OUP)

    Javeed Shah

  55. New tricks for old dogs: countering antibiotic resistance in tuberculosis with host-directed therapeutics

    Article • Immunological Reviews, February 2015, Wiley

    Javeed Shah

  56. Human TOLLIP Regulates TLR2 and TLR4 Signaling and Its Polymorphisms Are Associated with Susceptibility to Tuberculosis

    Article • The Journal of Immunology, August 2012, The American Association of Immunologists

    Javeed Shah

  57. Changes in the amplitude and timing of the hemodynamic response associated with prepulse inhibition of acoustic startle

    Article • NeuroImage, September 2006, Elsevier

    Javeed Shah

  58. Prime-Boost Vaccination with HIV-1 Gag Protein and Cytosine Phosphate Guanosine Oligodeoxynucleotide, Followed by Adenovirus, Induces Sustained and Robust Humoral and Cellular Immune Responses

    Article • The Journal of Immunology, September 2003, The American Association of Immunologists

    Javeed Shah

  59. Dendritic Cells Are Responsible for the Capacity of CpG Oligodeoxynucleotides to Act as an Adjuvant for Protective Vaccine Immunity Against Leishmania major in Mice

    Article • Journal of Experimental Medicine, July 2003, Rockefeller University Press

    Javeed Shah

  60. Vaccination with Heat-killed Leishmania Antigen or Recombinant Leishmanial Protein and CpG Oligodeoxynucleotides Induces Long-Term Memory CD4+and CD8+T Cell Responses and Protection Against Leishmania major Infection

    Article • Journal of Experimental Medicine, June 2002, Rockefeller University Press

    Javeed Shah

  61. Apolipoprotein E and apolipoprotein E receptors modulate Aβ-induced glial neuroinflammatory responses

    Article • Neurochemistry International, November 2001, Elsevier

    Javeed Shah

  62. Apolipoprotein E Receptors Mediate the Effects of β-Amyloid on Astrocyte Cultures

    Article • Journal of Biological Chemistry, October 2000, Elsevier

    Javeed Shah

  63. Unique Lipoproteins Secreted by Primary Astrocytes From Wild Type, apoE (−/−), and Human apoE Transgenic Mice

    Article • Journal of Biological Chemistry, October 1999, Elsevier

    Javeed Shah