All Stories

  1. Functional analysis of two uncharacterized genes, C130074G19Rik and I830077J02Rik , during early haematopoietic development
  2. Metabolic alterations driven by PFKFB3 upregulation confer resistance to trastuzumab in HER2-positive breast cancer
  3. X-chromosome upregulation operates on a gene-by-gene basis at RNA and protein levels
  4. HCFC1 and YY1 mediate recruitment of COMPASS and Integrator to initiate X chromosome inactivation
  5. The impact of hyperoxia and antibiotics on lung mesenchymal cells in experimental bronchopulmonary dysplasia
  6. Loss of endothelial ZEB2 in mice attenuates steatosis early during metabolic dysfunction-associated steatotic liver disease
  7. X-chromosome upregulation operates on a gene-by-gene basis at RNA and protein levels
  8. Butyrate Selectively Targets Super‐Enhancers and Transcriptional Networks Associated with Human Mast Cell Function
  9. Unprecedented male relative differentiation with Y-SNVs from whole genome sequencing
  10. KIF2A stabilizes intercellular bridge microtubules to maintain mouse embryonic stem cell cytokinesis
  11. Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  12. Reagents and resources from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  13. Supplementary Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  14. Supplementary Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  15. A non-syndromic orofacial cleft risk locus links tRNA splicing defects to neural crest cell pathologies
  16. CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  17. Analysis of comprehensive genomic profiling of solid tumors with a novel assay for broad analysis in clinical diagnostics
  18. Non-Invasive Determination of the Paternal Inheritance in Pregnancies at Risk for β-Thalassaemia by Analyzing Cell-Free Fetal DNA Using Targeted Next-Generation Sequencing
  19. A Novel XACT lncRNA Transcript with Functions Transcending X-Chromosome Inactivation
  20. Genome-wide cell-free DNA methylation profiling in advanced stage ovarian cancer. Are we looking at the tumor or the patient's immune response to the tumor?
  21. Bulk and single-cell transcriptomics identify gene signatures of stem cell-derived NK cell donors with superior cytolytic activity
  22. The molecular consequences of FOXF1 missense mutations associated with alveolar capillary dysplasia with misalignment of pulmonary veins
  23. BMP4 and Temozolomide Synergize in the Majority of Patient-Derived Glioblastoma Cultures
  24. Butyrate selectively targets super-enhancers and transcriptional networks associated with human mast cell function
  25. Human Pluripotent Stem Cell-Derived Astrocyte Functionality Compares Favorably with Primary Rat Astrocytes
  26. Genome-wide methylation analysis in patients with proximal hypospadias – a pilot study and review of the literature
  27. A cellular reporter system to evaluate endogenous fetal hemoglobin induction and screen for therapeutic compounds
  28. The Cellular Origin of the Pulmonary Pericyte
  29. LSD1/KDM1A and GFI1B repress endothelial fate and induce hematopoietic fate in induced pluripotent stem cell-derived hemogenic endotheliums
  30. DNA methylation database for gynecological cancer detection, classification and assay development
  31. Epigenomic partitioning of a polygenic risk score for asthma reveals distinct genetically driven disease pathways
  32. Unraveling the impact of AXIN1 mutations on HCC development: Insights from CRISPR/Cas9 repaired AXIN1-mutant liver cancer cell lines
  33. Epigenetic and Genomic Hallmarks of PARP-Inhibitor Resistance in Ovarian Cancer Patients
  34. Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison
  35. Species-specific responses during Seoul orthohantavirus infection in human and rat lung microvascular endothelial cells
  36. Distinctive cell‐free DNA methylation characterizes presymptomatic genetic frontotemporal dementia
  37. Runx1+ vascular smooth muscle cells are essential for hematopoietic stem and progenitor cell development in vivo
  38. A three-dimensional vessel-on-chip model to study Puumala orthohantavirus pathogenesis
  39. Comparison of Single Cell Transcriptome Sequencing Methods: Of Mice and Men
  40. Single-Cell RNA Sequencing of Donor-Reactive T Cells Reveals Role of Apoptosis in Donor-Specific Hyporesponsiveness of Kidney Transplant Recipients
  41. Liquid Biopsies for Colorectal Cancer and Advanced Adenoma Screening and Surveillance: What to Measure?
  42. Phenotypic differences in resistance to thyroid hormone alpha: differential recruitment of cofactors by thyroid hormone receptor alpha 1 mutants
  43. Mutation Analysis of Pancreatic Juice and Plasma for the Detection of Pancreatic Cancer
  44. 3D chromatin reprogramming primes human memory T H 2 cells for rapid recall and pathogenic dysfunction
  45. Targeted Genomic Sequencing of TSC1 and TSC2 Reveals Causal Variants in Individuals for Whom Previous Genetic Testing for Tuberous Sclerosis Complex Was Normal
  46. Machine learning-based somatic variant calling in cell-free DNA of metastatic breast cancer patients using large NGS panels
  47. PD-L1 checkpoint blockade promotes regulatory T cell activity that underlies therapy resistance
  48. Genome-wide analysis toward the epigenetic aetiology of myelodysplastic syndrome disease progression and pharmacoepigenomic basis of hypomethylating agents drug treatment response
  49. Zeb2 DNA-Binding Sites in Neuroprogenitor Cells Reveal Autoregulation and Affirm Neurodevelopmental Defects, Including in Mowat-Wilson Syndrome
  50. Retrospective analysis of enhancer activity and transcriptome history
  51. Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis
  52. Rabies virus uniquely reprograms the transcriptome of human monocyte-derived macrophages
  53. CABA-V7: a prospective biomarker selected trial of cabazitaxel treatment in AR-V7 positive prostate cancer patients
  54. USP7 regulates the ncPRC1 Polycomb axis to stimulate genomic H2AK119ub1 deposition uncoupled from H3K27me3
  55. A kinase inhibitor screen reveals MEK1/2 as a novel therapeutic target to antagonize IGF1R-mediated antiestrogen resistance in ERα-positive luminal breast cancer
  56. Bio-distribution and longevity of mesenchymal stromal cell derived membrane particles
  57. Molecular and behavioral consequences of Ube3a gene overdosage in mice
  58. Effect of bovine milk fat-based infant formulae on microbiota, metabolites and stool parameters in healthy term infants in a randomized, crossover, placebo-controlled trial
  59. Rapid specification of human pluripotent stem cells to functional astrocytes
  60. Identification of candidate enhancers controlling the transcriptome during the formation of interphalangeal joints
  61. A multiplex pedigree with pathologically confirmed multiple system atrophy and Parkinson’s disease with dementia
  62. PDGFRβ+ cells play a dual role as hematopoietic precursors and niche cells during mouse ontogeny
  63. Dominant-acting CSF1R variants cause microglial depletion and altered astrocytic phenotype in zebrafish and adult-onset leukodystrophy
  64. JMJD3 intrinsically disordered region links the 3D-genome structure to TGFβ-dependent transcription activation
  65. Comparative single-cell RNA-sequencing profiling of BMP4-treated primary glioma cultures reveals therapeutic markers
  66. CRISPRs in the human genome are differentially expressed between malignant and normal adjacent to tumor tissue
  67. Temozolomide and Radiotherapy versus Radiotherapy Alone in Patients with Glioblastoma, IDH-wildtype: Post Hoc Analysis of the EORTC Randomized Phase III CATNON Trial
  68. Genetic and epigenetic determinants of reactivation of Mecp2 and the inactive X chromosome in neural stem cells
  69. Kidney Organoids Are Capable of Forming Tumors, but Not Teratomas
  70. NOXA expression drives synthetic lethality to RUNX1 inhibition in pancreatic cancer
  71. Unraveling the Genetics of Congenital Diaphragmatic Hernia: An Ongoing Challenge
  72. Epigenomic analysis of KLF1 haploinsufficiency in primary human erythroblasts
  73. Genome-wide aberrant methylation in primary metastatic UM and their matched metastases
  74. Combined Analysis of Transcriptome and T-Cell Receptor Alpha and Beta (TRA/TRB) Repertoire in Paucicellular Samples at the Single-Cell Level
  75. Multi-Omics Profiling in Marfan Syndrome: Further Insights into the Molecular Mechanisms Involved in Aortic Disease
  76. SPEN is required for Xist upregulation during initiation of X chromosome inactivation
  77. The Somatic Mutation Paradigm in Congenital Malformations: Hirschsprung Disease as a Model
  78. The tumor suppressor MIR139 is silenced by POLR2M to promote AML oncogenesis
  79. RMplex: An efficient method for analyzing 30 Y-STRs with high mutation rates
  80. High-throughput and affordable genome-wide methylation profiling of circulating cell-free DNA by methylated DNA sequencing (MeD-seq) of LpnPI digested fragments
  81. Heritability and De Novo Mutations in Oesophageal Atresia and Tracheoesophageal Fistula Aetiology
  82. Enhancer-associated H3K4 methylation safeguards in vitro germline competence
  83. Identification of SPRY4 as a Novel Candidate Susceptibility Gene for Familial Nonmedullary Thyroid Cancer
  84. CTCF chromatin residence time controls three-dimensional genome organization, gene expression and DNA methylation in pluripotent cells
  85. Genome wide DNA methylation analysis of alveolar capillary dysplasia lung tissue reveals aberrant methylation of genes involved in development including the FOXF1 locus
  86. High throughput and affordable genome-wide methylation profiling of circulating cell-free DNA by Methylated DNA sequencing (MeD-seq) of LpnPI digested fragments
  87. Zeb2 DNA-binding sites in neuroprogenitor cells reveal autoregulation and affirm neurodevelopmental defects, including in Mowat-Wilson Syndrome
  88. Orphan CpG islands amplify poised enhancer regulatory activity and determine target gene responsiveness
  89. Molecular analysis of the erythroid phenotype of a patient with BCL11A haploinsufficiency
  90. Selective cell death in HIV-1-infected cells by DDX3 inhibitors leads to depletion of the inducible reservoir
  91. Prognostic significance of genome-wide DNA methylation profiles within the randomized, phase 3, EORTC CATNON trial on non-1p/19q deleted anaplastic glioma
  92. Endothelial Zeb2 preserves the hepatic angioarchitecture and protects against liver fibrosis
  93. Forkhead Box F1 as a mediator of Wnt signaling in human lung endothelial cells
  94. Interplay between FLI-1 and the LDB1 complex in murine erythroleukemia cells and during megakaryopoiesis
  95. Genetic and epigenetic determinants of reactivation of Mecp2 and the inactive X chromosome in neural stem cells
  96. Exploring the interspecific interactions and the metabolome of the soil isolateHylemonella gracilis
  97. Steroid-resistant human inflammatory ILC2s are marked by CD45RO and elevated in type 2 respiratory diseases
  98. CirculatingTP53mutations are associated with early tumor progression and poor survival in pancreatic cancer patients treated with FOLFIRINOX
  99. Low Input Targeted Chromatin Capture (Low-T2C)
  100. SPEN is Required forXistUpregulation during Initiation of X Chromosome Inactivation
  101. Comparison of the PU.1 transcriptional regulome and interactome in human and mouse inflammatory dendritic cells
  102. The Bone-Forming Properties of Periosteum-Derived Cells Differ Between Harvest Sites
  103. Histological, immunohistochemical and transcriptomic characterization of human tracheoesophageal fistulas
  104. Alveolar barrier disruption in varicella pneumonia is associated with neutrophil extracellular trap formation
  105. Differentially Methylated Regions in Desmoid-Type Fibromatosis: A Comparison Between CTNNB1 S45F and T41A Tumors
  106. Validation of a Combined Transcriptome and T Cell Receptor Alpha/Beta (TRA/TRB) Repertoire Assay at the Single Cell Level for Paucicellular Samples
  107. Induction of selective cell death in HIV-1-infected cells by DDX3 inhibitors leads to depletion of the inducible reservoir
  108. Gliotoxin, identified from a screen of fungal metabolites, disrupts 7SK snRNP, releases P-TEFb, and reverses HIV-1 latency
  109. Hemolysis in the spleen drives erythrocyte turnover
  110. Orphan CpG islands boost the regulatory activity of poised enhancers and dictate the responsiveness of their target genes
  111. Targeted chromatin conformation analysis identifies novel distal neural enhancers of ZEB2 in pluripotent stem cell differentiation
  112. p53 drives premature neuronal differentiation in response to radiation-induced DNA damage during early neurogenesis
  113. Rapid in vitro generation of bona fide exhausted CD8+ T cells is accompanied by Tcf7 promotor methylation
  114. In vitro capture and characterization of embryonic rosette-stage pluripotency between naive and primed states
  115. MAU2 and NIPBL Variants Impair the Heterodimerization of the Cohesin Loader Subunits and Cause Cornelia de Lange Syndrome
  116. Exome Sequencing Analysis Identifies Rare Variants in ATM and RPL8 That Are Associated With Shorter Telomere Length
  117. Butyrate inhibits human mast cell activation via epigenetic regulation of FcεRI‐mediated signaling
  118. Infantile hypertrophic pyloric stenosis in patients with esophageal atresia
  119. Notch signaling licenses allergic airway inflammation by promoting Th2 cell lymph node egress
  120. Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcriptional control
  121. Cystic renal-epithelial derived induced pluripotent stem cells from polycystic kidney disease patients
  122. MicroRNA expression and DNA methylation profiles do not distinguish between primary and recurrent well-differentiated liposarcoma
  123. Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb
  124. CREPT Promotes Melanoma Progression Through Accelerated Proliferation and Enhanced Migration by RhoA-Mediated Actin Filaments and Focal Adhesion Formation
  125. Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform-specific start-loss mutations of essential genes can cause genetic diseases
  126. Characterization of the ferret TRB locus guided by V, D, J, and C gene expression analysis
  127. G6PD genetic variations in neonatal Hyperbilirubinemia in Indonesian Deutromalay population
  128. Gliotoxin, identified from a screen of fungal metabolites, disrupts 7SK snRNP, releases P-TEFb and reverses HIV-1 latency
  129. Hemolysis in the Spleen Drives Erythrocyte Turnover
  130. Distinct IL‐1α‐responsive enhancers promote acute and coordinated changes in chromatin topology in a hierarchical manner
  131. Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome
  132. Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform specific start-loss mutations of essential genes can cause genetic diseases
  133. Late-onset phenotype associated with a homozygous GJC2 missense mutation in a Turkish family
  134. The presence of CLL-associated stereotypic B cell receptors in the normal BCR repertoire from healthy individuals increases with age
  135. A functional variant in the miR‐142 promoter modulating its expression and conferring risk of Alzheimer disease
  136. PDGFRB SIGNALING IS REQUIRED TO GENERATE AORTIC HAEMATOPOIETIC CELLS IN VIVO
  137. Publisher Correction: Mediator complex interaction partners organize the transcriptional network that defines neural stem cells
  138. Lewy pathology in Parkinson’s disease consists of crowded organelles and lipid membranes
  139. Mediator complex interaction partners organize the transcriptional network that defines neural stem cells
  140. Engram-specific transcriptome profiling of contextual memory consolidation
  141. Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcription control
  142. Models for infantile hypertrophic pyloric stenosis development in patients with esophageal atresia
  143. Modeling the Pathological Long-Range Regulatory Effects of Human Structural Variation with Patient-Specific hiPSCs
  144. The mouse KLF1 Nan variant impairs nuclear condensation and erythroid maturation
  145. Distinct Functions for Mammalian CLASP1 and -2 During Neurite and Axon Elongation
  146. MAU2 and NIPBL variants in Cornelia de Lange syndrome reveal MAU2-independent loading of cohesin and uncover a protective mechanism against early truncating mutations in NIPBL
  147. Epigenome analysis links gene regulatory elements in group 2 innate lymphocytes to asthma susceptibility
  148. The mouse Klf1 Nan variant impairs nuclear condensation and erythroid maturation
  149. PTRHD1 Loss-of-function mutation in an african family with juvenile-onset Parkinsonism and intellectual disability
  150. Whole-Genome Linkage Scan Combined With Exome Sequencing Identifies Novel Candidate Genes for Carotid Intima-Media Thickness
  151. Progression of ductal carcinoma in situ to invasive breast cancer: comparative genomic sequencing
  152. Mitotic progression, arrest, exit or death relies on centromere structural integrity, rather than de novo transcription
  153. LRP10 genetic variants in familial Parkinson's disease and dementia with Lewy bodies: a genome-wide linkage and sequencing study
  154. Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia Differentiation In Vivo
  155. Identification of Variants in RET and IHH Pathway Members in a Large Family With History of Hirschsprung Disease
  156. Large-Scale Expansion of Human iPSC-Derived Skeletal Muscle Cells for Disease Modeling and Cell-Based Therapeutic Strategies
  157. Employed family-based genetic discovery combining linkage analysis and exome sequencing to identify RCL1 as a novel candidate gene for depression, with independent replication in a population-based cohort
  158. Mitotic progression, arrest, exit or death is determined by centromere integrity and independent of de novo transcription
  159. ACO2 homozygous missense mutation associated with complicated hereditary spastic paraplegia
  160. Analysis of Mouse Brain Transcriptome After Experimental Duvenhage Virus Infection Shows Activation of Innate Immune Response and Pyroptotic Cell Death Pathway
  161. Nimbus: a design-driven analyses suite for amplicon-based NGS data
  162. SNPitty
  163. Investigation of the spatial structure and interactions of the genome at sub-kilobase-pair resolution using T2C
  164. Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
  165. Allele-specific long-distance regulation dictates IL-32 isoform switching and mediates susceptibility to HIV-1
  166. Variants in members of the cadherin–catenin complex, CDH1 and CTNND1, cause blepharocheilodontic syndrome
  167. UGT1A1 Genetic Variations and a Haplotype Associated with Neonatal Hyperbilirubinemia
  168. Regulation of the cohesin-loading factor NIPBL: Role of the lncRNA NIPBL-AS1 and identification of a distal enhancer element
  169. Genome-wide DNA methylation profiling using the methylation-dependent restriction enzyme LpnPI
  170. Group 2 Innate Lymphoid Cells Exhibit a Dynamic Phenotype in Allergic Airway Inflammation
  171. Germline variant in MSX1 identified in a Dutch family with clustering of Barrett’s esophagus and esophageal adenocarcinoma
  172. Thyroid State Regulates Gene Expression in Human Whole Blood
  173. Exome-Wide Meta-Analysis Identifies Rare 3′-UTR Variant in ERCC1/CD3EAP Associated with Symptoms of Sleep Apnea
  174. Immune Repertoire after Immunization As Seen by Next-Generation Sequencing and Proteomics
  175. Transcriptomic Analyses Reveal Differential Gene Expression of Immune and Cell Death Pathways in the Brains of Mice Infected with West Nile Virus and Chikungunya Virus
  176. DOC1-Dependent Recruitment of NURD Reveals Antagonism with SWI/SNF during Epithelial-Mesenchymal Transition in Oral Cancer Cells
  177. Loss-of-Function Variants in MYLK Cause Recessive Megacystis Microcolon Intestinal Hypoperistalsis Syndrome
  178. The influence of SNP-based chromosomal microarray and NIPT on the diagnostic yield in 10,000 fetuses with and without fetal ultrasound anomalies
  179. Cell lines generated from a chronic lymphocytic leukemia mouse model exhibit constitutive Btk and Akt signaling
  180. Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
  181. PRC2 Facilitates the Regulatory Topology Required for Poised Enhancer Function during Pluripotent Stem Cell Differentiation
  182. Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C
  183. An interaction network of mental disorder proteins in neural stem cells
  184. Nonsynonymous Variation in NKPD1 Increases Depressive Symptoms in European Populations
  185. A rare missense variant in RCL1 segregates with depression in extended families
  186. Loss of LMOD1 impairs smooth muscle cytocontractility and causes megacystis microcolon intestinal hypoperistalsis syndrome in humans and mice
  187. Whole exome sequencing coupled with unbiased functional analysis reveals new Hirschsprung disease genes
  188. Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging
  189. Exploiting native forces to capture chromosome conformation in mammalian cell nuclei
  190. The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes
  191. Unbiased Interrogation of 3D Genome Topology Using Chromosome Conformation Capture Coupled to High-Throughput Sequencing (4C-Seq)
  192. Transcriptome assists prognosis of disease severity in respiratory syncytial virus infected infants
  193. Zeb2 Regulates Cell Fate at the Exit from Epiblast State in Mouse Embryonic Stem Cells
  194. GATA1-Deficient Dendritic Cells Display Impaired CCL21-Dependent Migration toward Lymph Nodes Due to Reduced Levels of Polysialic Acid
  195. Comparison of Mycoplasma pneumoniae Genome Sequences from Strains Isolated from Symptomatic and Asymptomatic Patients
  196. Decreased IL7Rα and TdT expression underlie the skewed immunoglobulin repertoire of human B-cell precursors from fetal origin
  197. Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response
  198. Human age estimation from blood using mRNA, DNA methylation, DNA rearrangement, and telomere length
  199. Overexpression of LMO2 causes aberrant human T-Cell development in vivo by three potentially distinct cellular mechanisms
  200. Genomes of Ellobius species provide insight into the evolutionary dynamics of mammalian sex chromosomes
  201. Exome-sequencing in a large population-based study reveals a rare Asn396Ser variant in the LIPG gene associated with depressive symptoms
  202. Human USP18 deficiency underlies type 1 interferonopathy leading to severe pseudo-TORCH syndrome
  203. Genetic variants in RBFOX3 are associated with sleep latency
  204. Inefficient DNA Repair Is an Aging-Related Modifier of Parkinson’s Disease
  205. Paroxysmal exercise-induced dystonia within the phenotypic spectrum ofECHS1deficiency
  206. Effects of Freeze–Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression
  207. BMP and Hedgehog Regulate Distinct AGM Hematopoietic Stem Cells Ex Vivo
  208. Complex MAX Rearrangement in a Family With Malignant Pheochromocytoma, Renal Oncocytoma, and Erythrocytosis
  209. Biallelic Truncating Mutations in ALPK3 Cause Severe Pediatric Cardiomyopathy
  210. ACTG2variants impair actin polymerization in sporadic Megacystis Microcolon Intestinal Hypoperistalsis Syndrome
  211. Control of developmentally primed erythroid genes by combinatorial co-repressor actions
  212. miR-634 restores drug sensitivity in resistant ovarian cancer cells by targeting the Ras-MAPK pathway
  213. Erratum: Corrigendum: BMP signalling differentially regulates distinct haematopoietic stem cell types
  214. Nuclear positioning rather than contraction controls ordered rearrangements of immunoglobulin loci
  215. Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects
  216. The Isl1/Ldb1 Complex Orchestrates Genome-wide Chromatin Organization to Instruct Differentiation of Multipotent Cardiac Progenitors
  217. BMP signalling differentially regulates distinct haematopoietic stem cell types
  218. The core spliceosome as target and effector of non-canonical ATM signalling
  219. DC immunotherapy in HIV-1 infection induces a major blood transcriptome shift
  220. Proteins that bind regulatory regions identified by histone modification chromatin immunoprecipitations and mass spectrometry
  221. Genetics of skin color variation in Europeans: genome-wide association studies with functional follow-up
  222. Allogeneic Mature Human Dendritic Cells Generate Superior Alloreactive Regulatory T Cells in the Presence of IL-15
  223. A New CRB1 Rat Mutation Links Müller Glial Cells to Retinal Telangiectasia
  224. Incomplete meiotic sex chromosome inactivation in the domestic dog
  225. PLD3 variants in population studies
  226. Correction: Hypoxia Inducible Factor 3α Plays a Critical Role in Alveolarization and Distal Epithelial Cell Differentiation during Mouse Lung Development
  227. Time since Onset of Disease and Individual Clinical Markers Associate with Transcriptional Changes in Uncomplicated Dengue
  228. Targeted Next Generation Sequencing reveals previously unidentified TSC1 and TSC2 mutations
  229. Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects
  230. Global quantitative proteomics reveals novel factors in the ecdysone signaling pathway inDrosophila melanogaster
  231. Deciphering the RNA landscape by RNAome sequencing
  232. Endogenous WNT Signals Mediate BMP-Induced and Spontaneous Differentiation of Epiblast Stem Cells and Human Embryonic Stem Cells
  233. Whole-transcriptome analysis of endothelial to hematopoietic stem cell transition reveals a requirement for Gpr56 in HSC generation
  234. Sp1/Sp3 transcription factors regulate hallmarks of megakaryocyte maturation and platelet formation and function
  235. Gene reprogramming in exercise-induced cardiac hypertrophy in swine: A transcriptional genomics approach
  236. Regulated genes in psoriatic skin during treatment with fumaric acid esters
  237. The dystrophin gene and cognitive function in the general population
  238. Identification of microRNAs in Human Plasma
  239. Ovarian Cancer Cell Line Panel (OCCP): Clinical Importance of In Vitro Morphological Subtypes
  240. Analysis of the transcriptome and immune function of monocytes during IFNα-based therapy in chronic HCV revealed induction of TLR7 responsiveness
  241. SF3B1 and EIF1AX mutations in uveal melanoma: a protective factor, or not?
  242. Gene Expression Profiling To Predict and Assess the Consequences of Therapy-Induced Virus Eradication in Chronic Hepatitis C Virus Infection
  243. MicroRNA response to hypoxic stress in soft tissue sarcoma cells: microRNA mediated regulation of HIF3α
  244. Clinical significance of immunohistochemistry for detection of BAP1 mutations in uveal melanoma
  245. HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers
  246. Pre-B Cell Receptor Signaling Induces Immunoglobulin κ Locus Accessibility by Functional Redistribution of Enhancer-Mediated Chromatin Interactions
  247. Two independent transcription initiation codes overlap on vertebrate core promoters
  248. A Cohesin-Independent Role for NIPBL at Promoters Provides Insights in CdLS
  249. MicroRNA expression profiles distinguish liposarcoma subtypes and implicate miR-145 and miR-451 as tumor suppressors
  250. In vivo murine hepatic microRNA and mRNA expression signatures predicting the (non-)genotoxic carcinogenic potential of chemicals
  251. Gene Expression Analysis Reveals Inhibition of Radiation-Induced TGFβ-Signaling by Hyperbaric Oxygen Therapy in Mouse Salivary Glands
  252. Targeted Chromatin Capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements
  253. DNA damage responsive microRNAs misexpressed in human cancer modulate therapy sensitivity
  254. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
  255. Gene Expression Analysis of Peripheral Cells for Subclassification of Pediatric Inflammatory Bowel Disease in Remission
  256. BACH2: A marker of DNA damage and ageing
  257. Exome sequencing and functional analyses suggest that SIX6 is a gene involved in an altered proliferation–differentiation balance early in life and optic nerve degeneration at old age
  258. Developmental and Activity-Dependent miRNA Expression Profiling in Primary Hippocampal Neuron Cultures
  259. Contribution of rare and common variants determine complex diseases—Hirschsprung disease as a model
  260. Histone Chaperone NAP1 Mediates Sister Chromatid Resolution by Counteracting Protein Phosphatase 2A
  261. Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
  262. MiR-17-92 and miR-221/222 cluster members target KIT and ETV1 in human gastrointestinal stromal tumours
  263. Genome-wide, whole mount in situ analysis of transcriptional regulators in zebrafish embryos
  264. Next generation sequencing of SNPs for non-invasive prenatal diagnosis: challenges and feasibility as illustrated by an application to β-thalassaemia
  265. Balancing of Histone H3K4 Methylation States by the Kdm5c/SMCX Histone Demethylase Modulates Promoter and Enhancer Function
  266. In vivo live imaging of RNA polymerase II transcription factories in primary cells
  267. Canonical Wnt Signaling Induces a Primitive Endoderm Metastable State in Mouse Embryonic Stem Cells
  268. Small Hydrophobic Protein of Human Metapneumovirus Does Not Affect Virus Replication and Host Gene Expression In Vitro
  269. Early divergence of Th1 and Th2 transcriptomes involves a small core response and sets of transiently expressed genes
  270. Hypoxia Inducible Factor 3α Plays a Critical Role in Alveolarization and Distal Epithelial Cell Differentiation during Mouse Lung Development
  271. Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions
  272. Genome-wide analysis shows that Ldb1 controls essential hematopoietic genes/pathways in mouse early development and reveals novel players in hematopoiesis
  273. MicroRNA-133 Controls Brown Adipose Determination in Skeletal Muscle Satellite Cells by Targeting Prdm16
  274. Genome Instability in Lactobacillus rhamnosus GG
  275. Directed Migration of Cortical Interneurons Depends on the Cell-Autonomous Action of Sip1
  276. MicroRNA-Mediated Down-Regulation of M-CSF Receptor Contributes to Maturation of Mouse Monocyte-Derived Dendritic Cells
  277. Hydroxyurea responsiveness in  -thalassemic patients is determined by the stress response adaptation of erythroid progenitors and their differentiation propensity
  278. miR-141 regulates KEAP1 and modulates cisplatin sensitivity in ovarian cancer cells
  279. KLF10gene expression is associated with high fetal hemoglobin levels and with response to hydroxyurea treatment in β-hemoglobinopathy patients
  280. The Microtubule Plus-End Tracking Protein CLASP2 Is Required for Hematopoiesis and Hematopoietic Stem Cell Maintenance
  281. Snail Regulates MyoD Binding-Site Occupancy to Direct Enhancer Switching and Differentiation-Specific Transcription in Myogenesis
  282. A Novel Complex, RUNX1-MYEF2, Represses Hematopoietic Genes in Erythroid Cells
  283. Metabolic Enzyme IMPDH Is Also a Transcription Factor Regulated by Cellular State
  284. The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
  285. Transcriptional Dominance of Pax7 in Adult Myogenesis Is Due to High-Affinity Recognition of Homeodomain Motifs
  286. RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation
  287. A new function of ROD1 in nonsense-mediated mRNA decay
  288. Hypoxia-Inducible Factor 2α Plays a Critical Role in the Formation of Alveoli and Surfactant
  289. Progesterone Inhibits Epithelial-to-Mesenchymal Transition in Endometrial Cancer
  290. Genome-wide DNA methylation profiling of non-small cell lung carcinomas
  291. Dynamic long-range chromatin interactions controlMybproto-oncogene transcription during erythroid development
  292. Remodelers Organize Cellular Chromatin by Counteracting Intrinsic Histone-DNA Sequence Preferences in a Class-Specific Manner
  293. NARWHAL, a primary analysis pipeline for NGS data
  294. Left ventricular remodeling in swine after myocardial infarction: a transcriptional genomics approach
  295. The DNA-Binding Protein CTCF Limits Proximal Vκ Recombination and Restricts κ Enhancer Interactions to the Immunoglobulin κ Light Chain Locus
  296. Modulation of Androgen Receptor Signaling in Hormonal Therapy-Resistant Prostate Cancer Cell Lines
  297. Absence of Common Somatic Alterations in Genes on 1p and 19q in Oligodendrogliomas
  298. Chronic IFN-  production in mice induces anemia by reducing erythrocyte life span and inhibiting erythropoiesis through an IRF-1/PU.1 axis
  299. Effective Treatment of Psoriasis with Narrow-Band UVB Phototherapy Is Linked to Suppression of the IFN and Th17 Pathways
  300. The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA
  301. Gene expression profiling assigns CHEK2 1100delC breast cancers to the luminal intrinsic subtypes
  302. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
  303. The DNA binding factor Hmg20b is a repressor of erythroid differentiation
  304. Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes
  305. Mobilization of hepatic mesenchymal stem cells from human liver grafts
  306. Distinct Severe Acute Respiratory Syndrome Coronavirus-Induced Acute Lung Injury Pathways in Two Different Nonhuman Primate Species
  307. A systems approach to analyze transcription factors in mammalian cells
  308. Inflammatory conditions affect gene expression and function of human adipose tissue-derived mesenchymal stem cells
  309. Transcriptional profiling of fibroblasts from patients with mutations in MCT8 and comparative analysis with the human brain transcriptome
  310. Haploinsufficiency for the erythroid transcription factor KLF1 causes hereditary persistence of fetal hemoglobin
  311. Unacylated Ghrelin Rapidly Modulates Lipogenic and Insulin Signaling Pathway Gene Expression in Metabolically Active Tissues of GHSR Deleted Mice
  312. Pandemic 2009 H1N1 Influenza Virus Causes Diffuse Alveolar Damage in Cynomolgus Macaques
  313. FUNCTION OF HUMAN MESENCHYMAL STEM CELLS UNDER INFLAMMATORY CONDITIONS
  314. Gene Expression-Based Classification of Non-Small Cell Lung Carcinomas and Survival Prediction
  315. Exacerbated Innate Host Response to SARS-CoV in Aged Non-Human Primates
  316. Short-term dietary restriction and fasting precondition against ischemia reperfusion injury in mice
  317. The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
  318. Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells
  319. The ubiquitin-conjugating enzyme HR6B is required for maintenance of X chromosome silencing in mouse spermatocytes and spermatids
  320. CITED2 and NCOR2 in anti-oestrogen resistance and progression of breast cancer
  321. Monitoring of the Immunomodulatory Effect of CP-690,550 by Analysis of the JAK/STAT Pathway in Kidney Transplant Patients
  322. The FOXF2 pathway in the human prostate stroma
  323. Physiological Thyroid Hormone Levels Regulate Numerous Skeletal Muscle Transcripts
  324. MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response
  325. Persistent transcription-blocking DNA lesions trigger somatic growth attenuation associated with longevity
  326. Gene Expression Profiling in Uveal Melanoma: Two Regions on 3p Related to Prognosis
  327. Delayed and Accelerated Aging Share Common Longevity Assurance Mechanisms
  328. MN1 affects expression of genes involved in hematopoiesis and can enhance as well as inhibit RAR/RXR-induced gene expression
  329. Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated β-Globin Locus Control Region
  330. Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene
  331. Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene
  332. Difference in signalling between various hormone therapies in endometrium, myometrium and upper part of the vagina
  333. Genomic and Nongenomic Effects of Estrogen Signaling in Human Endometrial Cells: Involvement of the Growth Factor Receptor Signaling Downstream AKT Pathway
  334. Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples
  335. HPV related VIN: Highly proliferative and diminished responsiveness to extracellular signals
  336. The hormone replacement therapy drug tibolone acts very similar to medroxyprogesterone acetate in an estrogen-and progesterone-responsive endometrial cancer cell line
  337. Functional Differentiation of SWI/SNF Remodelers in Transcription and Cell Cycle Control
  338. Characterization of Spodoptera exigua multicapsid nucleopolyhedrovirus ORF17/18, a homologue of Xestia c-nigrum granulovirus ORF129
  339. Furin Is Involved in Baculovirus Envelope Fusion Protein Activation
  340. Identification of a Novel Occlusion Derived Virus-Specific Protein in Spodoptera exigua Multicapsid Nucleopolyhedrovirus
  341. The sequence of the Helicoverpa armigera single nucleocapsid nucleopolyhedrovirus genome
  342. Characteristics of the transactivator gene ie1 of Spodoptera exigua multiple nucleopolyhedrovirus
  343. Isolation of a Spodoptera exigua baculovirus recombinant with a 10·6 kbp genome deletion that retains biological activity
  344. A Novel Baculovirus Envelope Fusion Protein with a Proprotein Convertase Cleavage Site
  345. Identification, sequence analysis and phylogeny of the lef-2 gene of Helicoverpa armigera single-nucleocapsid baculovirus
  346. Sequence and organization of the Spodoptera exigua multicapsid nucleopolyhedrovirus genome