All Stories

  1. X-chromosome upregulation operates on a gene-by-gene basis at RNA and protein levels
  2. HCFC1 and YY1 mediate recruitment of COMPASS and Integrator to initiate X chromosome inactivation
  3. The impact of hyperoxia and antibiotics on lung mesenchymal cells in experimental bronchopulmonary dysplasia
  4. Loss of endothelial ZEB2 in mice attenuates steatosis early during metabolic dysfunction-associated steatotic liver disease
  5. X-chromosome upregulation operates on a gene-by-gene basis at RNA and protein levels
  6. Butyrate Selectively Targets Super‐Enhancers and Transcriptional Networks Associated with Human Mast Cell Function
  7. Unprecedented male relative differentiation with Y-SNVs from whole genome sequencing
  8. KIF2A stabilizes intercellular bridge microtubules to maintain mouse embryonic stem cell cytokinesis
  9. Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  10. Reagents and resources from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  11. Supplementary Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  12. Supplementary Data from CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  13. A non-syndromic orofacial cleft risk locus links tRNA splicing defects to neural crest cell pathologies
  14. CXCL10 Secreted by Pericytes Mediates TNFα-Induced Vascular Leakage in Tumors and Enhances Extravasation of Nanoparticle-Based Chemotherapeutics
  15. Analysis of comprehensive genomic profiling of solid tumors with a novel assay for broad analysis in clinical diagnostics
  16. Non-Invasive Determination of the Paternal Inheritance in Pregnancies at Risk for β-Thalassaemia by Analyzing Cell-Free Fetal DNA Using Targeted Next-Generation Sequencing
  17. A Novel XACT lncRNA Transcript with Functions Transcending X-Chromosome Inactivation
  18. Genome-wide cell-free DNA methylation profiling in advanced stage ovarian cancer. Are we looking at the tumor or the patient's immune response to the tumor?
  19. Bulk and single-cell transcriptomics identify gene signatures of stem cell-derived NK cell donors with superior cytolytic activity
  20. The molecular consequences of FOXF1 missense mutations associated with alveolar capillary dysplasia with misalignment of pulmonary veins
  21. BMP4 and Temozolomide Synergize in the Majority of Patient-Derived Glioblastoma Cultures
  22. Butyrate selectively targets super-enhancers and transcriptional networks associated with human mast cell function
  23. Human Pluripotent Stem Cell-Derived Astrocyte Functionality Compares Favorably with Primary Rat Astrocytes
  24. Genome-wide methylation analysis in patients with proximal hypospadias – a pilot study and review of the literature
  25. A cellular reporter system to evaluate endogenous fetal hemoglobin induction and screen for therapeutic compounds
  26. The Cellular Origin of the Pulmonary Pericyte
  27. LSD1/KDM1A and GFI1B repress endothelial fate and induce hematopoietic fate in induced pluripotent stem cell-derived hemogenic endotheliums
  28. DNA methylation database for gynecological cancer detection, classification and assay development
  29. Epigenomic partitioning of a polygenic risk score for asthma reveals distinct genetically driven disease pathways
  30. Unraveling the impact of AXIN1 mutations on HCC development: Insights from CRISPR/Cas9 repaired AXIN1-mutant liver cancer cell lines
  31. Epigenetic and Genomic Hallmarks of PARP-Inhibitor Resistance in Ovarian Cancer Patients
  32. Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison
  33. Species-specific responses during Seoul orthohantavirus infection in human and rat lung microvascular endothelial cells
  34. Distinctive cell‐free DNA methylation characterizes presymptomatic genetic frontotemporal dementia
  35. Runx1+ vascular smooth muscle cells are essential for hematopoietic stem and progenitor cell development in vivo
  36. A three-dimensional vessel-on-chip model to study Puumala orthohantavirus pathogenesis
  37. Comparison of Single Cell Transcriptome Sequencing Methods: Of Mice and Men
  38. Single-Cell RNA Sequencing of Donor-Reactive T Cells Reveals Role of Apoptosis in Donor-Specific Hyporesponsiveness of Kidney Transplant Recipients
  39. Liquid Biopsies for Colorectal Cancer and Advanced Adenoma Screening and Surveillance: What to Measure?
  40. Phenotypic differences in resistance to thyroid hormone alpha: differential recruitment of cofactors by thyroid hormone receptor alpha 1 mutants
  41. Mutation Analysis of Pancreatic Juice and Plasma for the Detection of Pancreatic Cancer
  42. 3D chromatin reprogramming primes human memory T H 2 cells for rapid recall and pathogenic dysfunction
  43. Targeted Genomic Sequencing of TSC1 and TSC2 Reveals Causal Variants in Individuals for Whom Previous Genetic Testing for Tuberous Sclerosis Complex Was Normal
  44. Machine learning-based somatic variant calling in cell-free DNA of metastatic breast cancer patients using large NGS panels
  45. PD-L1 checkpoint blockade promotes regulatory T cell activity that underlies therapy resistance
  46. Genome-wide analysis toward the epigenetic aetiology of myelodysplastic syndrome disease progression and pharmacoepigenomic basis of hypomethylating agents drug treatment response
  47. Zeb2 DNA-Binding Sites in Neuroprogenitor Cells Reveal Autoregulation and Affirm Neurodevelopmental Defects, Including in Mowat-Wilson Syndrome
  48. Retrospective analysis of enhancer activity and transcriptome history
  49. Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis
  50. Rabies virus uniquely reprograms the transcriptome of human monocyte-derived macrophages
  51. CABA-V7: a prospective biomarker selected trial of cabazitaxel treatment in AR-V7 positive prostate cancer patients
  52. USP7 regulates the ncPRC1 Polycomb axis to stimulate genomic H2AK119ub1 deposition uncoupled from H3K27me3
  53. A kinase inhibitor screen reveals MEK1/2 as a novel therapeutic target to antagonize IGF1R-mediated antiestrogen resistance in ERα-positive luminal breast cancer
  54. Bio-distribution and longevity of mesenchymal stromal cell derived membrane particles
  55. Molecular and behavioral consequences of Ube3a gene overdosage in mice
  56. Effect of bovine milk fat-based infant formulae on microbiota, metabolites and stool parameters in healthy term infants in a randomized, crossover, placebo-controlled trial
  57. Rapid specification of human pluripotent stem cells to functional astrocytes
  58. Identification of candidate enhancers controlling the transcriptome during the formation of interphalangeal joints
  59. A multiplex pedigree with pathologically confirmed multiple system atrophy and Parkinson’s disease with dementia
  60. PDGFRβ+ cells play a dual role as hematopoietic precursors and niche cells during mouse ontogeny
  61. Dominant-acting CSF1R variants cause microglial depletion and altered astrocytic phenotype in zebrafish and adult-onset leukodystrophy
  62. JMJD3 intrinsically disordered region links the 3D-genome structure to TGFβ-dependent transcription activation
  63. Comparative single-cell RNA-sequencing profiling of BMP4-treated primary glioma cultures reveals therapeutic markers
  64. CRISPRs in the human genome are differentially expressed between malignant and normal adjacent to tumor tissue
  65. Temozolomide and Radiotherapy versus Radiotherapy Alone in Patients with Glioblastoma, IDH-wildtype: Post Hoc Analysis of the EORTC Randomized Phase III CATNON Trial
  66. Genetic and epigenetic determinants of reactivation of Mecp2 and the inactive X chromosome in neural stem cells
  67. Kidney Organoids Are Capable of Forming Tumors, but Not Teratomas
  68. NOXA expression drives synthetic lethality to RUNX1 inhibition in pancreatic cancer
  69. Unraveling the Genetics of Congenital Diaphragmatic Hernia: An Ongoing Challenge
  70. Epigenomic analysis of KLF1 haploinsufficiency in primary human erythroblasts
  71. Genome-wide aberrant methylation in primary metastatic UM and their matched metastases
  72. Combined Analysis of Transcriptome and T-Cell Receptor Alpha and Beta (TRA/TRB) Repertoire in Paucicellular Samples at the Single-Cell Level
  73. Multi-Omics Profiling in Marfan Syndrome: Further Insights into the Molecular Mechanisms Involved in Aortic Disease
  74. SPEN is required for Xist upregulation during initiation of X chromosome inactivation
  75. The Somatic Mutation Paradigm in Congenital Malformations: Hirschsprung Disease as a Model
  76. The tumor suppressor MIR139 is silenced by POLR2M to promote AML oncogenesis
  77. RMplex: An efficient method for analyzing 30 Y-STRs with high mutation rates
  78. High-throughput and affordable genome-wide methylation profiling of circulating cell-free DNA by methylated DNA sequencing (MeD-seq) of LpnPI digested fragments
  79. Heritability and De Novo Mutations in Oesophageal Atresia and Tracheoesophageal Fistula Aetiology
  80. Enhancer-associated H3K4 methylation safeguards in vitro germline competence
  81. Identification of SPRY4 as a Novel Candidate Susceptibility Gene for Familial Nonmedullary Thyroid Cancer
  82. CTCF chromatin residence time controls three-dimensional genome organization, gene expression and DNA methylation in pluripotent cells
  83. Genome wide DNA methylation analysis of alveolar capillary dysplasia lung tissue reveals aberrant methylation of genes involved in development including the FOXF1 locus
  84. High throughput and affordable genome-wide methylation profiling of circulating cell-free DNA by Methylated DNA sequencing (MeD-seq) of LpnPI digested fragments
  85. Zeb2 DNA-binding sites in neuroprogenitor cells reveal autoregulation and affirm neurodevelopmental defects, including in Mowat-Wilson Syndrome
  86. Orphan CpG islands amplify poised enhancer regulatory activity and determine target gene responsiveness
  87. Molecular analysis of the erythroid phenotype of a patient with BCL11A haploinsufficiency
  88. Selective cell death in HIV-1-infected cells by DDX3 inhibitors leads to depletion of the inducible reservoir
  89. Prognostic significance of genome-wide DNA methylation profiles within the randomized, phase 3, EORTC CATNON trial on non-1p/19q deleted anaplastic glioma
  90. Endothelial Zeb2 preserves the hepatic angioarchitecture and protects against liver fibrosis
  91. Forkhead Box F1 as a mediator of Wnt signaling in human lung endothelial cells
  92. Interplay between FLI-1 and the LDB1 complex in murine erythroleukemia cells and during megakaryopoiesis
  93. Genetic and epigenetic determinants of reactivation of Mecp2 and the inactive X chromosome in neural stem cells
  94. Exploring the interspecific interactions and the metabolome of the soil isolateHylemonella gracilis
  95. Steroid-resistant human inflammatory ILC2s are marked by CD45RO and elevated in type 2 respiratory diseases
  96. CirculatingTP53mutations are associated with early tumor progression and poor survival in pancreatic cancer patients treated with FOLFIRINOX
  97. Low Input Targeted Chromatin Capture (Low-T2C)
  98. SPEN is Required forXistUpregulation during Initiation of X Chromosome Inactivation
  99. Comparison of the PU.1 transcriptional regulome and interactome in human and mouse inflammatory dendritic cells
  100. The Bone-Forming Properties of Periosteum-Derived Cells Differ Between Harvest Sites
  101. Histological, immunohistochemical and transcriptomic characterization of human tracheoesophageal fistulas
  102. Alveolar barrier disruption in varicella pneumonia is associated with neutrophil extracellular trap formation
  103. Differentially Methylated Regions in Desmoid-Type Fibromatosis: A Comparison Between CTNNB1 S45F and T41A Tumors
  104. Validation of a Combined Transcriptome and T Cell Receptor Alpha/Beta (TRA/TRB) Repertoire Assay at the Single Cell Level for Paucicellular Samples
  105. Induction of selective cell death in HIV-1-infected cells by DDX3 inhibitors leads to depletion of the inducible reservoir
  106. Gliotoxin, identified from a screen of fungal metabolites, disrupts 7SK snRNP, releases P-TEFb, and reverses HIV-1 latency
  107. Hemolysis in the spleen drives erythrocyte turnover
  108. Orphan CpG islands boost the regulatory activity of poised enhancers and dictate the responsiveness of their target genes
  109. Targeted chromatin conformation analysis identifies novel distal neural enhancers of ZEB2 in pluripotent stem cell differentiation
  110. p53 drives premature neuronal differentiation in response to radiation-induced DNA damage during early neurogenesis
  111. Rapid in vitro generation of bona fide exhausted CD8+ T cells is accompanied by Tcf7 promotor methylation
  112. In vitro capture and characterization of embryonic rosette-stage pluripotency between naive and primed states
  113. MAU2 and NIPBL Variants Impair the Heterodimerization of the Cohesin Loader Subunits and Cause Cornelia de Lange Syndrome
  114. Exome Sequencing Analysis Identifies Rare Variants in ATM and RPL8 That Are Associated With Shorter Telomere Length
  115. Butyrate inhibits human mast cell activation via epigenetic regulation of FcεRI‐mediated signaling
  116. Infantile hypertrophic pyloric stenosis in patients with esophageal atresia
  117. Notch signaling licenses allergic airway inflammation by promoting Th2 cell lymph node egress
  118. Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcriptional control
  119. Cystic renal-epithelial derived induced pluripotent stem cells from polycystic kidney disease patients
  120. MicroRNA expression and DNA methylation profiles do not distinguish between primary and recurrent well-differentiated liposarcoma
  121. Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb
  122. CREPT Promotes Melanoma Progression Through Accelerated Proliferation and Enhanced Migration by RhoA-Mediated Actin Filaments and Focal Adhesion Formation
  123. Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform-specific start-loss mutations of essential genes can cause genetic diseases
  124. Characterization of the ferret TRB locus guided by V, D, J, and C gene expression analysis
  125. G6PD genetic variations in neonatal Hyperbilirubinemia in Indonesian Deutromalay population
  126. Gliotoxin, identified from a screen of fungal metabolites, disrupts 7SK snRNP, releases P-TEFb and reverses HIV-1 latency
  127. Hemolysis in the Spleen Drives Erythrocyte Turnover
  128. Distinct IL‐1α‐responsive enhancers promote acute and coordinated changes in chromatin topology in a hierarchical manner
  129. Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome
  130. Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform specific start-loss mutations of essential genes can cause genetic diseases
  131. Late-onset phenotype associated with a homozygous GJC2 missense mutation in a Turkish family
  132. The presence of CLL-associated stereotypic B cell receptors in the normal BCR repertoire from healthy individuals increases with age
  133. A functional variant in the miR‐142 promoter modulating its expression and conferring risk of Alzheimer disease
  134. PDGFRB SIGNALING IS REQUIRED TO GENERATE AORTIC HAEMATOPOIETIC CELLS IN VIVO
  135. Publisher Correction: Mediator complex interaction partners organize the transcriptional network that defines neural stem cells
  136. Lewy pathology in Parkinson’s disease consists of crowded organelles and lipid membranes
  137. Mediator complex interaction partners organize the transcriptional network that defines neural stem cells
  138. Engram-specific transcriptome profiling of contextual memory consolidation
  139. Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcription control
  140. Models for infantile hypertrophic pyloric stenosis development in patients with esophageal atresia
  141. Modeling the Pathological Long-Range Regulatory Effects of Human Structural Variation with Patient-Specific hiPSCs
  142. The mouse KLF1 Nan variant impairs nuclear condensation and erythroid maturation
  143. Distinct Functions for Mammalian CLASP1 and -2 During Neurite and Axon Elongation
  144. MAU2 and NIPBL variants in Cornelia de Lange syndrome reveal MAU2-independent loading of cohesin and uncover a protective mechanism against early truncating mutations in NIPBL
  145. Epigenome analysis links gene regulatory elements in group 2 innate lymphocytes to asthma susceptibility
  146. The mouse Klf1 Nan variant impairs nuclear condensation and erythroid maturation
  147. PTRHD1 Loss-of-function mutation in an african family with juvenile-onset Parkinsonism and intellectual disability
  148. Whole-Genome Linkage Scan Combined With Exome Sequencing Identifies Novel Candidate Genes for Carotid Intima-Media Thickness
  149. Progression of ductal carcinoma in situ to invasive breast cancer: comparative genomic sequencing
  150. Mitotic progression, arrest, exit or death relies on centromere structural integrity, rather than de novo transcription
  151. LRP10 genetic variants in familial Parkinson's disease and dementia with Lewy bodies: a genome-wide linkage and sequencing study
  152. Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia Differentiation In Vivo
  153. Identification of Variants in RET and IHH Pathway Members in a Large Family With History of Hirschsprung Disease
  154. Large-Scale Expansion of Human iPSC-Derived Skeletal Muscle Cells for Disease Modeling and Cell-Based Therapeutic Strategies
  155. Employed family-based genetic discovery combining linkage analysis and exome sequencing to identify RCL1 as a novel candidate gene for depression, with independent replication in a population-based cohort
  156. Mitotic progression, arrest, exit or death is determined by centromere integrity and independent of de novo transcription
  157. ACO2 homozygous missense mutation associated with complicated hereditary spastic paraplegia
  158. Analysis of Mouse Brain Transcriptome After Experimental Duvenhage Virus Infection Shows Activation of Innate Immune Response and Pyroptotic Cell Death Pathway
  159. Nimbus: a design-driven analyses suite for amplicon-based NGS data
  160. SNPitty
  161. Investigation of the spatial structure and interactions of the genome at sub-kilobase-pair resolution using T2C
  162. Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
  163. Allele-specific long-distance regulation dictates IL-32 isoform switching and mediates susceptibility to HIV-1
  164. Variants in members of the cadherin–catenin complex, CDH1 and CTNND1, cause blepharocheilodontic syndrome
  165. UGT1A1 Genetic Variations and a Haplotype Associated with Neonatal Hyperbilirubinemia
  166. Regulation of the cohesin-loading factor NIPBL: Role of the lncRNA NIPBL-AS1 and identification of a distal enhancer element
  167. Genome-wide DNA methylation profiling using the methylation-dependent restriction enzyme LpnPI
  168. Group 2 Innate Lymphoid Cells Exhibit a Dynamic Phenotype in Allergic Airway Inflammation
  169. Germline variant in MSX1 identified in a Dutch family with clustering of Barrett’s esophagus and esophageal adenocarcinoma
  170. Thyroid State Regulates Gene Expression in Human Whole Blood
  171. Exome-Wide Meta-Analysis Identifies Rare 3′-UTR Variant in ERCC1/CD3EAP Associated with Symptoms of Sleep Apnea
  172. Immune Repertoire after Immunization As Seen by Next-Generation Sequencing and Proteomics
  173. Transcriptomic Analyses Reveal Differential Gene Expression of Immune and Cell Death Pathways in the Brains of Mice Infected with West Nile Virus and Chikungunya Virus
  174. DOC1-Dependent Recruitment of NURD Reveals Antagonism with SWI/SNF during Epithelial-Mesenchymal Transition in Oral Cancer Cells
  175. Loss-of-Function Variants in MYLK Cause Recessive Megacystis Microcolon Intestinal Hypoperistalsis Syndrome
  176. The influence of SNP-based chromosomal microarray and NIPT on the diagnostic yield in 10,000 fetuses with and without fetal ultrasound anomalies
  177. Cell lines generated from a chronic lymphocytic leukemia mouse model exhibit constitutive Btk and Akt signaling
  178. Lewy pathology in Parkinson’s disease consists of a crowded organellar, membranous medley
  179. PRC2 Facilitates the Regulatory Topology Required for Poised Enhancer Function during Pluripotent Stem Cell Differentiation
  180. Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C
  181. An interaction network of mental disorder proteins in neural stem cells
  182. Nonsynonymous Variation in NKPD1 Increases Depressive Symptoms in European Populations
  183. A rare missense variant in RCL1 segregates with depression in extended families
  184. Loss of LMOD1 impairs smooth muscle cytocontractility and causes megacystis microcolon intestinal hypoperistalsis syndrome in humans and mice
  185. Whole exome sequencing coupled with unbiased functional analysis reveals new Hirschsprung disease genes
  186. Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging
  187. Exploiting native forces to capture chromosome conformation in mammalian cell nuclei
  188. The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes
  189. Unbiased Interrogation of 3D Genome Topology Using Chromosome Conformation Capture Coupled to High-Throughput Sequencing (4C-Seq)
  190. Transcriptome assists prognosis of disease severity in respiratory syncytial virus infected infants
  191. Zeb2 Regulates Cell Fate at the Exit from Epiblast State in Mouse Embryonic Stem Cells
  192. GATA1-Deficient Dendritic Cells Display Impaired CCL21-Dependent Migration toward Lymph Nodes Due to Reduced Levels of Polysialic Acid
  193. Comparison of Mycoplasma pneumoniae Genome Sequences from Strains Isolated from Symptomatic and Asymptomatic Patients
  194. Decreased IL7Rα and TdT expression underlie the skewed immunoglobulin repertoire of human B-cell precursors from fetal origin
  195. Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response
  196. Human age estimation from blood using mRNA, DNA methylation, DNA rearrangement, and telomere length
  197. Overexpression of LMO2 causes aberrant human T-Cell development in vivo by three potentially distinct cellular mechanisms
  198. Genomes of Ellobius species provide insight into the evolutionary dynamics of mammalian sex chromosomes
  199. Exome-sequencing in a large population-based study reveals a rare Asn396Ser variant in the LIPG gene associated with depressive symptoms
  200. Human USP18 deficiency underlies type 1 interferonopathy leading to severe pseudo-TORCH syndrome
  201. Genetic variants in RBFOX3 are associated with sleep latency
  202. Inefficient DNA Repair Is an Aging-Related Modifier of Parkinson’s Disease
  203. Paroxysmal exercise-induced dystonia within the phenotypic spectrum ofECHS1deficiency
  204. Effects of Freeze–Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression
  205. BMP and Hedgehog Regulate Distinct AGM Hematopoietic Stem Cells Ex Vivo
  206. Complex MAX Rearrangement in a Family With Malignant Pheochromocytoma, Renal Oncocytoma, and Erythrocytosis
  207. Biallelic Truncating Mutations in ALPK3 Cause Severe Pediatric Cardiomyopathy
  208. ACTG2variants impair actin polymerization in sporadic Megacystis Microcolon Intestinal Hypoperistalsis Syndrome
  209. Control of developmentally primed erythroid genes by combinatorial co-repressor actions
  210. miR-634 restores drug sensitivity in resistant ovarian cancer cells by targeting the Ras-MAPK pathway
  211. Erratum: Corrigendum: BMP signalling differentially regulates distinct haematopoietic stem cell types
  212. Nuclear positioning rather than contraction controls ordered rearrangements of immunoglobulin loci
  213. Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects
  214. The Isl1/Ldb1 Complex Orchestrates Genome-wide Chromatin Organization to Instruct Differentiation of Multipotent Cardiac Progenitors
  215. BMP signalling differentially regulates distinct haematopoietic stem cell types
  216. The core spliceosome as target and effector of non-canonical ATM signalling
  217. DC immunotherapy in HIV-1 infection induces a major blood transcriptome shift
  218. Proteins that bind regulatory regions identified by histone modification chromatin immunoprecipitations and mass spectrometry
  219. Genetics of skin color variation in Europeans: genome-wide association studies with functional follow-up
  220. Allogeneic Mature Human Dendritic Cells Generate Superior Alloreactive Regulatory T Cells in the Presence of IL-15
  221. A New CRB1 Rat Mutation Links Müller Glial Cells to Retinal Telangiectasia
  222. Incomplete meiotic sex chromosome inactivation in the domestic dog
  223. PLD3 variants in population studies
  224. Correction: Hypoxia Inducible Factor 3α Plays a Critical Role in Alveolarization and Distal Epithelial Cell Differentiation during Mouse Lung Development
  225. Time since Onset of Disease and Individual Clinical Markers Associate with Transcriptional Changes in Uncomplicated Dengue
  226. Targeted Next Generation Sequencing reveals previously unidentified TSC1 and TSC2 mutations
  227. Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects
  228. Global quantitative proteomics reveals novel factors in the ecdysone signaling pathway inDrosophila melanogaster
  229. Deciphering the RNA landscape by RNAome sequencing
  230. Endogenous WNT Signals Mediate BMP-Induced and Spontaneous Differentiation of Epiblast Stem Cells and Human Embryonic Stem Cells
  231. Whole-transcriptome analysis of endothelial to hematopoietic stem cell transition reveals a requirement for Gpr56 in HSC generation
  232. Sp1/Sp3 transcription factors regulate hallmarks of megakaryocyte maturation and platelet formation and function
  233. Gene reprogramming in exercise-induced cardiac hypertrophy in swine: A transcriptional genomics approach
  234. Regulated genes in psoriatic skin during treatment with fumaric acid esters
  235. The dystrophin gene and cognitive function in the general population
  236. Identification of microRNAs in Human Plasma
  237. Ovarian Cancer Cell Line Panel (OCCP): Clinical Importance of In Vitro Morphological Subtypes
  238. Analysis of the transcriptome and immune function of monocytes during IFNα-based therapy in chronic HCV revealed induction of TLR7 responsiveness
  239. SF3B1 and EIF1AX mutations in uveal melanoma: a protective factor, or not?
  240. Gene Expression Profiling To Predict and Assess the Consequences of Therapy-Induced Virus Eradication in Chronic Hepatitis C Virus Infection
  241. MicroRNA response to hypoxic stress in soft tissue sarcoma cells: microRNA mediated regulation of HIF3α
  242. Clinical significance of immunohistochemistry for detection of BAP1 mutations in uveal melanoma
  243. HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers
  244. Pre-B Cell Receptor Signaling Induces Immunoglobulin κ Locus Accessibility by Functional Redistribution of Enhancer-Mediated Chromatin Interactions
  245. Two independent transcription initiation codes overlap on vertebrate core promoters
  246. A Cohesin-Independent Role for NIPBL at Promoters Provides Insights in CdLS
  247. MicroRNA expression profiles distinguish liposarcoma subtypes and implicate miR-145 and miR-451 as tumor suppressors
  248. In vivo murine hepatic microRNA and mRNA expression signatures predicting the (non-)genotoxic carcinogenic potential of chemicals
  249. Gene Expression Analysis Reveals Inhibition of Radiation-Induced TGFβ-Signaling by Hyperbaric Oxygen Therapy in Mouse Salivary Glands
  250. Targeted Chromatin Capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements
  251. DNA damage responsive microRNAs misexpressed in human cancer modulate therapy sensitivity
  252. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
  253. Gene Expression Analysis of Peripheral Cells for Subclassification of Pediatric Inflammatory Bowel Disease in Remission
  254. BACH2: A marker of DNA damage and ageing
  255. Exome sequencing and functional analyses suggest that SIX6 is a gene involved in an altered proliferation–differentiation balance early in life and optic nerve degeneration at old age
  256. Developmental and Activity-Dependent miRNA Expression Profiling in Primary Hippocampal Neuron Cultures
  257. Contribution of rare and common variants determine complex diseases—Hirschsprung disease as a model
  258. Histone Chaperone NAP1 Mediates Sister Chromatid Resolution by Counteracting Protein Phosphatase 2A
  259. Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
  260. MiR-17-92 and miR-221/222 cluster members target KIT and ETV1 in human gastrointestinal stromal tumours
  261. Genome-wide, whole mount in situ analysis of transcriptional regulators in zebrafish embryos
  262. Next generation sequencing of SNPs for non-invasive prenatal diagnosis: challenges and feasibility as illustrated by an application to β-thalassaemia
  263. Balancing of Histone H3K4 Methylation States by the Kdm5c/SMCX Histone Demethylase Modulates Promoter and Enhancer Function
  264. In vivo live imaging of RNA polymerase II transcription factories in primary cells
  265. Canonical Wnt Signaling Induces a Primitive Endoderm Metastable State in Mouse Embryonic Stem Cells
  266. Small Hydrophobic Protein of Human Metapneumovirus Does Not Affect Virus Replication and Host Gene Expression In Vitro
  267. Early divergence of Th1 and Th2 transcriptomes involves a small core response and sets of transiently expressed genes
  268. Hypoxia Inducible Factor 3α Plays a Critical Role in Alveolarization and Distal Epithelial Cell Differentiation during Mouse Lung Development
  269. Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions
  270. Genome-wide analysis shows that Ldb1 controls essential hematopoietic genes/pathways in mouse early development and reveals novel players in hematopoiesis
  271. MicroRNA-133 Controls Brown Adipose Determination in Skeletal Muscle Satellite Cells by Targeting Prdm16
  272. Genome Instability in Lactobacillus rhamnosus GG
  273. Directed Migration of Cortical Interneurons Depends on the Cell-Autonomous Action of Sip1
  274. MicroRNA-Mediated Down-Regulation of M-CSF Receptor Contributes to Maturation of Mouse Monocyte-Derived Dendritic Cells
  275. Hydroxyurea responsiveness in  -thalassemic patients is determined by the stress response adaptation of erythroid progenitors and their differentiation propensity
  276. miR-141 regulates KEAP1 and modulates cisplatin sensitivity in ovarian cancer cells
  277. KLF10gene expression is associated with high fetal hemoglobin levels and with response to hydroxyurea treatment in β-hemoglobinopathy patients
  278. The Microtubule Plus-End Tracking Protein CLASP2 Is Required for Hematopoiesis and Hematopoietic Stem Cell Maintenance
  279. Snail Regulates MyoD Binding-Site Occupancy to Direct Enhancer Switching and Differentiation-Specific Transcription in Myogenesis
  280. A Novel Complex, RUNX1-MYEF2, Represses Hematopoietic Genes in Erythroid Cells
  281. Metabolic Enzyme IMPDH Is Also a Transcription Factor Regulated by Cellular State
  282. The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
  283. Transcriptional Dominance of Pax7 in Adult Myogenesis Is Due to High-Affinity Recognition of Homeodomain Motifs
  284. RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation
  285. A new function of ROD1 in nonsense-mediated mRNA decay
  286. Hypoxia-Inducible Factor 2α Plays a Critical Role in the Formation of Alveoli and Surfactant
  287. Progesterone Inhibits Epithelial-to-Mesenchymal Transition in Endometrial Cancer
  288. Genome-wide DNA methylation profiling of non-small cell lung carcinomas
  289. Dynamic long-range chromatin interactions controlMybproto-oncogene transcription during erythroid development
  290. Remodelers Organize Cellular Chromatin by Counteracting Intrinsic Histone-DNA Sequence Preferences in a Class-Specific Manner
  291. NARWHAL, a primary analysis pipeline for NGS data
  292. Left ventricular remodeling in swine after myocardial infarction: a transcriptional genomics approach
  293. The DNA-Binding Protein CTCF Limits Proximal Vκ Recombination and Restricts κ Enhancer Interactions to the Immunoglobulin κ Light Chain Locus
  294. Modulation of Androgen Receptor Signaling in Hormonal Therapy-Resistant Prostate Cancer Cell Lines
  295. Absence of Common Somatic Alterations in Genes on 1p and 19q in Oligodendrogliomas
  296. Chronic IFN-  production in mice induces anemia by reducing erythrocyte life span and inhibiting erythropoiesis through an IRF-1/PU.1 axis
  297. Effective Treatment of Psoriasis with Narrow-Band UVB Phototherapy Is Linked to Suppression of the IFN and Th17 Pathways
  298. The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA
  299. Gene expression profiling assigns CHEK2 1100delC breast cancers to the luminal intrinsic subtypes
  300. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
  301. The DNA binding factor Hmg20b is a repressor of erythroid differentiation
  302. Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes
  303. Mobilization of hepatic mesenchymal stem cells from human liver grafts
  304. Distinct Severe Acute Respiratory Syndrome Coronavirus-Induced Acute Lung Injury Pathways in Two Different Nonhuman Primate Species
  305. A systems approach to analyze transcription factors in mammalian cells
  306. Inflammatory conditions affect gene expression and function of human adipose tissue-derived mesenchymal stem cells
  307. Transcriptional profiling of fibroblasts from patients with mutations in MCT8 and comparative analysis with the human brain transcriptome
  308. Haploinsufficiency for the erythroid transcription factor KLF1 causes hereditary persistence of fetal hemoglobin
  309. Unacylated Ghrelin Rapidly Modulates Lipogenic and Insulin Signaling Pathway Gene Expression in Metabolically Active Tissues of GHSR Deleted Mice
  310. Pandemic 2009 H1N1 Influenza Virus Causes Diffuse Alveolar Damage in Cynomolgus Macaques
  311. FUNCTION OF HUMAN MESENCHYMAL STEM CELLS UNDER INFLAMMATORY CONDITIONS
  312. Gene Expression-Based Classification of Non-Small Cell Lung Carcinomas and Survival Prediction
  313. Exacerbated Innate Host Response to SARS-CoV in Aged Non-Human Primates
  314. Short-term dietary restriction and fasting precondition against ischemia reperfusion injury in mice
  315. The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
  316. Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells
  317. The ubiquitin-conjugating enzyme HR6B is required for maintenance of X chromosome silencing in mouse spermatocytes and spermatids
  318. CITED2 and NCOR2 in anti-oestrogen resistance and progression of breast cancer
  319. Monitoring of the Immunomodulatory Effect of CP-690,550 by Analysis of the JAK/STAT Pathway in Kidney Transplant Patients
  320. The FOXF2 pathway in the human prostate stroma
  321. Physiological Thyroid Hormone Levels Regulate Numerous Skeletal Muscle Transcripts
  322. MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response
  323. Persistent transcription-blocking DNA lesions trigger somatic growth attenuation associated with longevity
  324. Gene Expression Profiling in Uveal Melanoma: Two Regions on 3p Related to Prognosis
  325. Delayed and Accelerated Aging Share Common Longevity Assurance Mechanisms
  326. MN1 affects expression of genes involved in hematopoiesis and can enhance as well as inhibit RAR/RXR-induced gene expression
  327. Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated β-Globin Locus Control Region
  328. Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene
  329. Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene
  330. Difference in signalling between various hormone therapies in endometrium, myometrium and upper part of the vagina
  331. Genomic and Nongenomic Effects of Estrogen Signaling in Human Endometrial Cells: Involvement of the Growth Factor Receptor Signaling Downstream AKT Pathway
  332. Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples
  333. HPV related VIN: Highly proliferative and diminished responsiveness to extracellular signals
  334. The hormone replacement therapy drug tibolone acts very similar to medroxyprogesterone acetate in an estrogen-and progesterone-responsive endometrial cancer cell line
  335. Functional Differentiation of SWI/SNF Remodelers in Transcription and Cell Cycle Control
  336. Characterization of Spodoptera exigua multicapsid nucleopolyhedrovirus ORF17/18, a homologue of Xestia c-nigrum granulovirus ORF129
  337. Furin Is Involved in Baculovirus Envelope Fusion Protein Activation
  338. Identification of a Novel Occlusion Derived Virus-Specific Protein in Spodoptera exigua Multicapsid Nucleopolyhedrovirus
  339. The sequence of the Helicoverpa armigera single nucleocapsid nucleopolyhedrovirus genome
  340. Characteristics of the transactivator gene ie1 of Spodoptera exigua multiple nucleopolyhedrovirus
  341. Isolation of a Spodoptera exigua baculovirus recombinant with a 10·6 kbp genome deletion that retains biological activity
  342. A Novel Baculovirus Envelope Fusion Protein with a Proprotein Convertase Cleavage Site
  343. Identification, sequence analysis and phylogeny of the lef-2 gene of Helicoverpa armigera single-nucleocapsid baculovirus
  344. Sequence and organization of the Spodoptera exigua multicapsid nucleopolyhedrovirus genome