All Stories

  1. Immune remodelling and molecular profiling of progressive brain metastases following cranial radiotherapy
  2. Time-resolved immune dynamics in rheumatoid arthritis under methotrexate therapy
  3. The PRECISE European initiative for cancer-vulnerability mapping and prediction
  4. Cortical development dynamics across autism spectrum disorder mouse models
  5. Mtor / Rptor Function Globally Prevents Cortical Microcephaly and Cell-autonomously Promotes Postnatal Neuron Survival in Cell Type Specific Manner
  6. Persistent viral control status is associated with enhanced innate immune responses in people with HIV-1
  7. What are the limits to biomedical research acceleration through general-purpose AI?
  8. Multimodal learning enables chat-based exploration of single-cell data
  9. Pipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold standard
  10. Systematic discovery of CRISPR-boosted CAR T cell immunotherapies
  11. Quantitative profiling of human brain organoid cell diversity across four protocols and multiple cell lines
  12. Single‐cell multi‐omics characterize colorectal tumors, adjacent healthy tissue and matched (tumor) organoids identifying CRC ‐unique features
  13. Unveiling genetic signatures of immune response in immune-related diseases through single-cell eQTL analysis across diverse conditions
  14. Integrated time-series analysis and high-content CRISPR screening delineate the dynamics of macrophage immune regulation
  15. Molecularly informed analysis of histopathology images using natural language
  16. HDAC1 controls the generation and maintenance of effector-like CD8+ T cells during chronic viral infection
  17. Protecting centrosomes from fracturing enables efficient cell navigation
  18. PHLPP2 is a pseudophosphatase that lost activity in the metazoan ancestor
  19. Single-cell and chromatin accessibility profiling reveals regulatory programs of pathogenic Th2 cells in allergic asthma
  20. 24-Nor-ursodeoxycholic acid improves intestinal inflammation by targeting T H 17 pathogenicity and transdifferentiation
  21. Cell-type-specific requirement for TYK2 in murine immune cells under steady state and challenged conditions
  22. Altered spawning seasons of Atlantic salmon broodstock transcriptionally and epigenetically influence cell cycle and lipid-mediated regulations in their offspring
  23. Single-cell CRISPR screening in mouse brain
  24. Time-resolved immune dynamics in rheumatoid arthritis under methotrexate therapy
  25. Reconstitution of Human Brain Cell Diversity in Organoids via Four Protocols
  26. Engineering Next-Generation CAR T Cells Via Genetic Screens
  27. Nuclear receptor corepressor 1 controls regulatory T cell subset differentiation and effector function
  28. Multimodal learning of transcriptomes and text enables interactive single-cell RNA-seq data exploration with natural-language chats
  29. Mechanical Centrosome Fracturing during Cell Navigation
  30. GPT-4 as a biomedical simulator
  31. Targeting T cell plasticity in kidney and gut inflammation by pooled single-cell CRISPR screening
  32. Mapping the brain’s gene-regulatory maze
  33. Aberrant Lipid Metabolism in Macrophages Is Associated with Granuloma Formation in Sarcoidosis
  34. Adaptive immune responses are larger and functionally preserved in a hypervaccinated individual
  35. Baseline JAK–STAT signaling maintains immune cell homeostasis
  36. JAK-STAT signaling maintains homeostasis in T cells and macrophages
  37. Hyperactive STAT5 hijacks T cell receptor signaling and drives immature T cell acute lymphoblastic leukemia
  38. Transient expression of the neuropeptide galanin modulates peripheral‑to‑central connectivity in the somatosensory thalamus during whisker development in mice
  39. HDAC1 controls the generation and maintenance of effector-like CD8 + T cells during chronic viral infection
  40. One-carbon metabolism nutrients impact the interplay between DNA methylation and gene expression in liver, enhancing protein synthesis in Atlantic salmon
  41. Altered spawning seasons of Atlantic salmon broodstock transcriptionally and epigenetically influence cell cycle and lipid-mediated regulations in their offspring
  42. Multi‐organ single‐cell RNA sequencing in mice reveals early hyperglycemia responses that converge on fibroblast dysregulation
  43. Efficacy and safety of mTOR inhibition in cutaneous sarcoidosis: a single-centre trial
  44. The pathophysiology of sepsis and precision-medicine-based immunotherapy
  45. Multi-omics analysis of innate and adaptive responses to BCG vaccination reveals epigenetic cell states that predict trained immunity
  46. Multipotent progenitors instruct ontogeny of the superior colliculus
  47. Endoscope-enhanced fluorescence-guided microsurgery increases survival in patients with glioblastoma
  48. Metabolic support by macrophages sustains colonic epithelial homeostasis
  49. One-carbon metabolism nutrients impact the interplay between DNA methylation and gene expression in liver, enhancing protein synthesis in Atlantic Salmon
  50. Biallelic NFATC1 mutations cause an inborn error of immunity with impaired CD8+ T-cell function and perturbed glycolysis
  51. Pharmacological perturbation of the phase-separating protein SMNDC1
  52. Single-cell profiling uncovers regulatory programs of pathogenic Th2 cells in allergic asthma
  53. Systemic Inflammation and Normocytic Anemia in DOCK11 Deficiency
  54. Multi-organ single-cell RNA-sequencing reveals early hyperglycaemia responses that converge on fibroblast dysregulation
  55. Cell-autonomous regulation of complement C3 by factor H limits macrophage efferocytosis and exacerbates atherosclerosis
  56. Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis
  57. Large language models are universal biomedical simulators
  58. Buffy coat signatures of breast cancer risk in a prospective cohort study
  59. Multipotent Progenitors Instruct Ontogeny of the Superior Colliculus
  60. Targeting the catalytic activity of HDAC1 in T cells protects against experimental autoimmune encephalomyelitis
  61. Epigenetic regulation of T cell lineages in skin and blood following hematopoietic stem cell transplantation
  62. Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation
  63. Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species
  64. Radiomic features define risk and are linked to DNA methylation attributes in primary CNS lymphoma
  65. The 2000HIV study: Design, multi-omics methods and participant characteristics
  66. Stress signaling boosts interferon-induced gene transcription in macrophages
  67. Interleukin‐6 initiates muscle‐ and adipose tissue wasting in a novel C57BL/6 model of cancer‐associated cachexia
  68. Early anteroposterior regionalisation of human neural crest is shaped by a pro-mesodermal factor
  69. PL01.3.A Radiomic features and DNA methylation attributes in primary CNS lymphoma
  70. Acknowledging and citing core facilities
  71. A toolbox for class I HDACs reveals isoform specific roles in gene regulation and protein acetylation
  72. Gruffi: an algorithm for computational removal of stressed cells from brain organoid transcriptomic datasets
  73. SMNDC1 links chromatin remodeling and splicing to regulate pancreatic hormone expression
  74. Viral variant-resolved wastewater surveillance of SARS-CoV-2 at national scale
  75. Glioma progression is shaped by genetic evolution and microenvironment interactions
  76. Paediatric Pineal Region Cysts: Enigma or Impaired Glymphatic Neurofluid System?
  77. Emergence of SARS-CoV-2 Alpha lineage and its correlation with quantitative wastewater-based epidemiology data
  78. Nuclear receptor corepressor 1 controls regulatory T cell subset differentiation and effector function
  79. Comprehensive Analysis of Nasal Polyps Reveals a More Pronounced Type 2 Transcriptomic Profile of Epithelial Cells and Mast Cells in Aspirin-Exacerbated Respiratory Disease
  80. Cellular stress in brain organoids is limited to a distinct and bioinformatically removable subpopulation
  81. Transcriptional, epigenetic and metabolic signatures in cardiometabolic syndrome defined by extreme phenotypes
  82. Defining the impact of adjuvant treatment on the prognosis of patients with inoperable glioblastoma undergoing biopsy only: does the survival benefit outweigh the treatment effort?
  83. High-content CRISPR screening
  84. Rapid neutrophil mobilization by VCAM-1+ endothelial cell-derived extracellular vesicles
  85. PD‐L1 overexpression correlates with JAK2‐V617F mutational burden and is associated with 9p uniparental disomy in myeloproliferative neoplasms
  86. LIQUORICE: detection of epigenetic signatures in liquid biopsies based on whole-genome sequencing data
  87. Curation and expansion of Human Phenotype Ontology for defined groups of inborn errors of immunity
  88. An inhibitor-mediated beta-cell dedifferentiation model reveals distinct roles for FoxO1 in glucagon repression and insulin maturation
  89. Response to comment on “Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2”
  90. Human resident memory T cells exit the skin and mediate systemic Th2-driven inflammation
  91. Early anteroposterior regionalisation of human neural crest is shaped by a pro-mesodermal factor
  92. Hyperglycemia Induces Trained Immunity in Macrophages and Their Precursors and Promotes Atherosclerosis
  93. Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation
  94. Comprehensive approach for identification of functional FCGR2C alleles resulting in protein expression as a determinant for predicting predisposition to autoimmunity
  95. Rapid, early and accurate SARS-CoV-2 detection using RT-qPCR in primary care: a prospective cohort study (REAP-1)
  96. Single-cell analysis reveals innate lymphoid cell lineage infidelity in atopic dermatitis
  97. High-throughput Mutational Surveillance of the SARS-CoV-2 Spike Gene
  98. High-throughput drug screening identifies the ATR-CHK1 pathway as a therapeutic vulnerability of CALR mutated hematopoietic cells
  99. Genomic imprinting in mouse blastocysts is predominantly associated with H3K27me3
  100. Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing
  101. Multimodal analysis of cell-free DNA whole-genome sequencing for pediatric cancers with low mutational burden
  102. Hematopoietic expression of a chimeric murine‐human CALR oncoprotein allows the assessment of anti‐CALR antibody immunotherapies in vivo
  103. Histone deacetylase 1 controls CD4+ T cell trafficking in autoinflammatory diseases
  104. Tumor mutational burden and immune infiltrates in renal cell carcinoma and matched brain metastases
  105. Complex Interplay Between MAZR and Runx3 Regulates the Generation of Cytotoxic T Lymphocyte and Memory T Cells
  106. Publisher Correction: LifeTime and improving European healthcare through cell-based interceptive medicine
  107. SARS-CoV-2 mutations in MHC-I–restricted epitopes evade CD8 + T cell responses
  108. Temporal dissection of an enhancer cluster reveals distinct temporal and functional contributions of individual elements
  109. Spontaneously Resolved Atopic Dermatitis Shows Melanocyte and Immune Cell Activation Distinct From Healthy Control Skin
  110. Precision Medicine in Hematology 2021: Definitions, Tools, Perspectives, and Open Questions
  111. αβγδ T cells play a vital role in fetal human skin development and immunity
  112. Acute BAF perturbation causes immediate changes in chromatin accessibility
  113. Chromatin accessibility profiling methods
  114. Publisher Correction: Rational discovery of molecular glue degraders via scalable chemical profiling
  115. Persistence of mature dendritic cells, T H 2A, and Tc2 cells characterize clinically resolved atopic dermatitis under IL-4Rα blockade
  116. The Organoid Cell Atlas
  117. RANK links thymic regulatory T cells to fetal loss and gestational diabetes in pregnancy
  118. SARS-CoV-2 escapes CD8 T cell surveillance via mutations in MHC-I restricted epitopes
  119. STAT3 promotes melanoma metastasis by CEBP-induced repression of the MITF pathway
  120. Requirement of DNMT1 to orchestrate epigenomic reprogramming for NPM-ALK–driven lymphomagenesis
  121. ENDOTHELIAL CELL-DERIVED EXTRACELLULAR VESICLES ELICIT NEUTROPHIL DEPLOYMENT FROM THE SPLEEN FOLLOWING ACUTE MYOCARDIAL INFARCTION
  122. Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2
  123. Long-term skin-resident memory T cells proliferate in situ and are involved in human graft-versus-host disease
  124. Single-Cell RNA Sequencing Analysis Reveals a Crucial Role for CTHRC1 (Collagen Triple Helix Repeat Containing 1) Cardiac Fibroblasts After Myocardial Infarction
  125. Novel imprints in mouse blastocysts are predominantly DNA methylation independent
  126. Overexpression of PD-L1 Correlates with JAK2-V617F Mutational Burden and Is Associated with Chromosome 9p Uniparental Disomy in MPN
  127. Anti-Apoptotic Molecule BCL2 Is a Therapeutic Target in Steroid-Refractory Graft-Versus-Host Disease
  128. Single-cell transcriptomics combined with interstitial fluid proteomics defines cell type–specific immune regulation in atopic dermatitis
  129. Distributed changes of the functional connectome in patients with glioblastoma
  130. A discrete subset of epigenetically primed human NK cells mediates antigen-specific immune responses
  131. Disturbed mitochondrial dynamics in CD8+ TILs reinforce T cell exhaustion
  132. Circadian rhythm influences induction of trained immunity by BCG vaccination
  133. LifeTime and improving European healthcare through cell-based interceptive medicine
  134. Genomic and phenomic insights from an atlas of genetic effects on DNA methylation
  135. Emergence of coronavirus disease 2019 (COVID-19) in Austria
  136. Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
  137. Knowledge-primed neural networks enable biologically interpretable deep learning on single-cell sequencing data
  138. Rational discovery of molecular glue degraders via scalable chemical profiling
  139. Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria
  140. The cytoskeletal regulator HEM1 governs B cell development and prevents autoimmunity
  141. Cell-Type Specificity of Genomic Imprinting in Cerebral Cortex
  142. Structural cells are key regulators of organ-specific immune responses
  143. Selective Mediator dependence of cell-type-specifying transcription
  144. Detailed temporal dissection of an enhancer cluster reveals two distinct roles for individual elements
  145. Molecular design of hypothalamus development
  146. Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets
  147. Publisher Correction: Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection
  148. Requirement of DNMT1 to orchestrate epigenomic reprogramming during NPM-ALK driven T cell lymphomagenesis
  149. NCOR1 Orchestrates Transcriptional Landscapes and Effector Functions of CD4+ T Cells
  150. Microbiota-Derived Metabolites Suppress Arthritis by Amplifying Aryl-Hydrocarbon Receptor Activation in Regulatory B Cells
  151. Targeting clinical epigenetic reprogramming for chemoprevention of metabolic and viral hepatocellular carcinoma
  152. DNA methylation QTL analysis identifies new regulators of human longevity
  153. Transcriptional, epigenetic and metabolic signatures in cardiometabolic syndrome defined by extreme phenotypes
  154. Quantitative comparison of within-sample heterogeneity scores for DNA methylation data
  155. Histone deacetylases 1 and 2 restrain CD4+ cytotoxic T lymphocyte differentiation
  156. Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF
  157. Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib response in CLL
  158. Ultra-high throughput single-cell RNA sequencing by combinatorial fluidic indexing
  159. The Transcription Factor MAZR/PATZ1 Regulates the Development of FOXP3+ Regulatory T Cells
  160. Life‐long impairment of glucose homeostasis upon prenatal exposure to psychostimulants
  161. Longitudinal molecular trajectories of diffuse glioma in adults
  162. Life-long epigenetic programming of cortical architecture by maternal ‘Western’ diet during pregnancy
  163. Aryl Hydrocarbon Receptor Contributes to the Transcriptional Program of IL-10-Producing Regulatory B Cells
  164. Genome-scale CRISPR screens are efficient in non-homologous end-joining deficient cells
  165. Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection
  166. Knowledge-primed neural networks enable biologically interpretable deep learning on single-cell sequencing data
  167. Guadecitabine plus ipilimumab in unresectable melanoma: the NIBIT-M4 clinical trial
  168. B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma
  169. 033 Expansion of BCL2+ lymphocytes in cutaneous graft-versus host disease is associated with steroid resistance and poor prognosis
  170. Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers
  171. Peptide translocation by the lysosomal ABC transporter TAPL is regulated by coupling efficiency and activation energy
  172. Epigenomics and Single-Cell Sequencing Define a Developmental Hierarchy in Langerhans Cell Histiocytosis
  173. Mutational landscape of the transcriptome offers putative targets for immunotherapy of myeloproliferative neoplasms
  174. Abstract LB-325: Developmental hierarchy in Langerhans cell histiocytosis
  175. Abstract 319: Integrated ATAC-seq and single-cell synergistic chemosensitivity profiling identifies rational drug combinations in ibrutinib treated CLL patients
  176. Mitochondria Are a Subset of Extracellular Vesicles Released by Activated Monocytes and Induce Type I IFN and TNF Responses in Endothelial Cells
  177. Spatiotemporal structure of cell fate decisions in murine neural crest
  178. HCV-Induced Epigenetic Changes Associated With Liver Cancer Risk Persist After Sustained Virologic Response
  179. MTHFD1 interaction with BRD4 links folate metabolism to transcriptional regulation
  180. Safety and immunobiological activity of guadecitabine sequenced with ipilimumab in metastatic melanoma patients: The phase Ib NIBIT-M4 study.
  181. Single-cell RNA-seq analysis reveals the crucial role of Collagen Triplex Helix Repeat Containing 1 (CTHRC1) cardiac fibroblasts for ventricular remodeling after myocardial infarction
  182. Lysosomal targeting of the ABC transporter TAPL is determined by membrane-localized charged residues
  183. CDK6 coordinates JAK2V617F mutant MPN via NF-κB and apoptotic networks
  184. Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia
  185. RnBeads 2.0: comprehensive analysis of DNA methylation data
  186. NK Cells Require Cell-Extrinsic and -Intrinsic TYK2 for Full Functionality in Tumor Surveillance and Antibacterial Immunity
  187. Combined chemosensitivity and chromatin profiling prioritizes drug combinations in CLL
  188. Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes
  189. Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency
  190. The ERBB-STAT3 Axis Drives Tasmanian Devil Facial Tumor Disease
  191. Mutational Landscape of the Transcriptome Offers a Rich Neoantigen Resource for Immunotherapy of Myeloproliferative Neoplasms
  192. B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma
  193. Inference of tumor cell-specific transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection of cancer
  194. Structural and functional insights into the interaction and targeting hub TMD0 of the polypeptide transporter TAPL
  195. Colocalization analyses of genomic elements: approaches, recommendations and challenges
  196. MTHFD1 is a genetic interactor of BRD4 and links folate metabolism to transcriptional regulation
  197. STAT3 promotes melanoma metastasis by CEBP-induced repression of the MITF pigmentation pathway
  198. The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space
  199. Functional Dissection of the Enhancer Repertoire in Human Embryonic Stem Cells
  200. Epigenome-based prediction of gene expression across species
  201. Abstract CT059: Epigenetic tumor remodelling to improve the efficacy of immune checkpoint blockade: the NIBIT-M4 clinical trial
  202. Coloc-stats: a unified web interface to perform colocalization analysis of genomic features
  203. An ERK-Dependent Feedback Mechanism Prevents Hematopoietic Stem Cell Exhaustion
  204. A Diabetes-induced innate immune memory drives inflammation and atherosclerosis, despite restoration of normoglycaemia
  205. Targeted mutation screening of 292 candidate genes in 38 children with inborn haematological cytopenias efficiently identifies novel disease-causing mutations
  206. Assessment of established techniques to determine developmental and malignant potential of human pluripotent stem cells
  207. The ERBB-STAT3 Axis Drives Tasmanian Devil Facial Tumor Disease
  208. Structural characterization of the intrinsically disordered domain of Mycobacterium tuberculosis protein tyrosine kinase A
  209. MIRA: an R package for DNA methylation-based inference of regulatory activity
  210. Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species
  211. Parental micronutrient deficiency distorts liver DNA methylation and expression of lipid genes associated with a fatty-liver-like phenotype in offspring
  212. Glioma through the looking GLASS: molecular evolution of diffuse gliomas and the Glioma Longitudinal Analysis Consortium
  213. Comparative analysis of neutrophil and monocyte epigenomes
  214. STAT5BN642H is a driver mutation for T cell neoplasia
  215. Proposed Terminology and Classification of Pre-Malignant Neoplastic Conditions: A Consensus Proposal
  216. Parallel genome-wide screens identify synthetic viable interactions between the BLM helicase complex and Fanconi anemia
  217. Glioma Through the Looking GLASS: the Glioma Longitudinal Analysis consortium, molecular evolution of diffuse gliomas
  218. A T cell-specific deletion of HDAC1 protects against experimental autoimmune encephalomyelitis
  219. Mapping the mouse Allelome reveals tissue-specific regulation of allelic expression
  220. The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space
  221. Functional dissection of the enhancer repertoire in human embryonic stem cells
  222. TECPR2 a positive regulator of autophagy is implicated in healthy brain ageing
  223. FRI0055 Histone deacetylase 1 (HDAC1): a novel therapeutic target in rheumatoid arthritis
  224. A combinatorial screen of the CLOUD uncovers a synergy targeting the androgen receptor
  225. VCF.Filter: interactive prioritization of disease-linked genetic variants from sequencing data
  226. DeepBlueR: large-scale epigenomic analysis in R
  227. Malondialdehyde epitopes are sterile mediators of hepatic inflammation in hypercholesterolemic mice
  228. DNA methylation heterogeneity defines a disease spectrum in Ewing sarcoma
  229. Pooled CRISPR screening with single-cell transcriptome readout
  230. Artemisinins Target GABAA Receptor Signaling and Impair α Cell Identity
  231. Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes
  232. Genomic and transcriptional landscape of P2RY8-CRLF2-positive childhood acute lymphoblastic leukemia
  233. Erratum to: Making sense of big data in health research: towards an EU action plan
  234. DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation
  235. The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery
  236. Epigenetic Homogeneity Within Colorectal Tumors Predicts Shorter Relapse-Free and Overall Survival Times for Patients With Locoregional Cancer
  237. Pooled CRISPR screening with single-cell transcriptome read-out
  238. Preserve personal freedom in networked societies
  239. Specification of tissue-resident macrophages during organogenesis
  240. Multi-Omics of Single Cells: Strategies and Applications
  241. Parallel reverse genetic screening in mutant human cells using transcriptomics
  242. A Kinase-Independent Function of CDK6 Links the Cell Cycle to Tumor Angiogenesis
  243. Epigenome characterization of CHO cells in response to evolutionary pressures and over time
  244. Quantitative comparison of DNA methylation assays for biomarker development and clinical applications
  245. Chromatin accessibility maps of chronic lymphocytic leukaemia identify subtype-specific epigenome signatures and transcription regulatory networks
  246. Making sense of big data in health research: Towards an EU action plan
  247. Familial early-onset dementia with complex neuropathologic phenotype and genomic background
  248. Next-generation sequencing identifies major DNA methylation changes during progression of Ph+ chronic myeloid leukemia
  249. Mapping the chemical chromatin reactivation landscape identifies BRD4-TAF1 cross-talk
  250. Comprehensive genome and epigenome characterization of CHO cells in response to evolutionary pressures and over time
  251. DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region sets
  252. A Comprehensive Analysis of the Dynamic Response to Aphidicolin-Mediated Replication Stress Uncovers Targets for ATM and ATMIN
  253. Abstract PR13: DNA methylation mapping and computational modeling in a large Ewing sarcoma cohort identifies principles of tumor heterogeneity and their impact on clinical phenotypes
  254. Diagenode® Premium RRBS technology: cost-effective DNA methylation mapping with superior coverage
  255. Single‐cell transcriptomes reveal characteristic features of human pancreatic islet cell types
  256. Differential DNA Methylation Analysis without a Reference Genome
  257. Assembly of the MHC I peptide-loading complex determined by a conserved ionic lock-switch
  258. LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor
  259. Whole-exome sequencing identifies novel MPL and JAK2 mutations in triple-negative myeloproliferative neoplasms
  260. Team work at its best – TAPL and its two domains
  261. ChIPmentation: fast, robust, low-input ChIP-seq for histones and transcription factors
  262. Toward understanding and exploiting tumor heterogeneity
  263. Pharmacological targeting of the Wdr5-MLL interaction in C/EBPα N-terminal leukemia
  264. Correction: Corrigendum: DNA methylation signatures link prenatal famine exposure to growth and metabolism
  265. Inherited DOCK2 Deficiency in Patients with Early-Onset Invasive Infections
  266. Imprinted expression in cystic embryoid bodies shows an embryonic and not an extra-embryonic pattern
  267. Dissecting the role of aberrant DNA methylation in human leukaemia
  268. An extended combinatorial 15N, 13Cα, and $$ ^{13} {\text{C}}^{\prime } $$ labeling approach to protein backbone resonance assignment
  269. KRAS and CREBBP mutations: a relapse-linked malicious liaison in childhood high hyperdiploid acute lymphoblastic leukemia
  270. Improving reference epigenome catalogs by computational prediction
  271. Notch-mediated expansion of cord blood progenitors: maintenance of transcriptional and epigenetic fidelity
  272. Single-Cell DNA Methylome Sequencing and Bioinformatic Inference of Epigenomic Cell-State Dynamics
  273. Epigenome Mapping Reveals Distinct Modes of Gene Regulation and Widespread Enhancer Reprogramming by the Oncogenic Fusion Protein EWS-FLI1
  274. Model-Based Whole-Genome Analysis of DNA Methylation Fidelity
  275. DNA methylation signatures link prenatal famine exposure to growth and metabolism
  276. Erratum: Notch inhibition allows oncogene-independent generation of iPS cells
  277. Erratum: Notch inhibition allows oncogene-independent generation of iPS cells
  278. Time-shared experiments for efficient assignment of triple-selectively labeled proteins
  279. Abstract A60: An epigenetic map of Ewing sarcoma revealed by comprehensive epigenome sequencing
  280. NOTCH1 activation in breast cancer confers sensitivity to inhibition of SUMOylation
  281. Comprehensive analysis of DNA methylation data with RnBeads
  282. Regulation of DNA Methylation Patterns by CK2-Mediated Phosphorylation of Dnmt3a
  283. Notch inhibition allows oncogene-independent generation of iPS cells
  284. BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives
  285. Epigenomic Profiling of Young and Aged HSCs Reveals Concerted Changes during Aging that Reinforce Self-Renewal
  286. Promoter hypermethylation of the phosphatase DUSP22 mediates PKA‐dependent TAU phosphorylation and CREB activation in Alzheimer's disease
  287. Relationship between genome and epigenome - challenges and requirements for future research
  288. Synergy and competition between cancer genome sequencing and epigenome mapping projects
  289. Somatic Mutations of Calreticulin in Myeloproliferative Neoplasms
  290. A Prognostic DNA Methylation Signature for Stage I Non–Small-Cell Lung Cancer
  291. Complex Patterns of Chromosome 11 Aberrations in Myeloid Malignancies Target CBL, MLL, DDB1 and LMO2
  292. Recommendations for the design and analysis of epigenome-wide association studies
  293. Conformational stabilization of the membrane embedded targeting domain of the lysosomal peptide transporter TAPL for solution NMR
  294. A reversible gene trap collection empowers haploid genetics in human cells
  295. A Kinase-Independent Function of CDK6 Links the Cell Cycle to Tumor Angiogenesis
  296. Recruitment of the MLL complex via specific interaction of the p30 variant of C/EBPα with Wdr5 is essential for development of acute myeloid leukemia
  297. Identification of Novel Imprinted Differentially Methylated Regions by Global Analysis of Human-Parthenogenetic-Induced Pluripotent Stem Cells
  298. High-Resolution Mapping of H1 Linker Histone Variants in Embryonic Stem Cells
  299. Proliferation-Dependent Alterations of the DNA Methylation Landscape Underlie Hematopoietic Stem Cell Aging
  300. DNA methylation: a matter of culture
  301. Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues
  302. Analysing and interpreting DNA methylation data
  303. DNA Methylation Dynamics during In Vivo Differentiation of Blood and Skin Stem Cells
  304. Managing drug resistance in cancer: lessons from HIV therapy
  305. DNA methylation biomarkers in cancer: progress towards clinical implementation
  306. Erosion of Dosage Compensation Impacts Human iPSC Disease Modeling
  307. Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk
  308. BLUEPRINT to decode the epigenetic signature written in blood
  309. Epigenom-Karten erstellen und nutzen
  310. EpiExplorer: live exploration and global analysis of large epigenomic datasets
  311. Analyzing Epigenome Data in Context of Genome Evolution and Human Diseases
  312. Genomic Distribution and Inter-Sample Variation of Non-CpG Methylation across Human Cell Types
  313. RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing
  314. Dnmt3a is essential for hematopoietic stem cell differentiation
  315. Global DNA Demethylation During Mouse Erythropoiesis in Vivo
  316. Highly efficient derivation of ventricular cardiomyocytes from induced pluripotent stem cells with a distinct epigenetic signature
  317. A promoter DNA demethylation landscape of human hematopoietic differentiation
  318. Lung Stem Cell Self-Renewal Relies on BMI1-Dependent Control of Expression at Imprinted Loci
  319. A DNA methylation fingerprint of 1628 human samples
  320. BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing
  321. Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
  322. Reference Maps of Human ES and iPS Cell Variation Enable High-Throughput Characterization of Pluripotent Cell Lines
  323. Paternally Induced Transgenerational Environmental Reprogramming of Metabolic Gene Expression in Mammals
  324. Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
  325. Quantitative comparison of genome-wide DNA methylation mapping technologies
  326. Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution
  327. Web-Based Analysis of (Epi-) Genome Data Using EpiGRAPH and Galaxy
  328. Epigenetic biomarker development
  329. Neuroendocrine Function following Traumatic Brain Injury and Subsequent Intensive Care Treatment: A Prospective Longitudinal Evaluation
  330. High-throughput bisulfite sequencing in mammalian genomes
  331. DNA Methylation Analysis of Chromosome 21 Gene Promoters at Single Base Pair and Single Allele Resolution
  332. Intraosseous Ultrasound in the Placement of Pedicle Screws in the Lumbar Spine
  333. MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays
  334. EpiGRAPH: user-friendly software for statistical analysis and prediction of (epi)genomic data
  335. Influence of ground predators and water levels on Lapwing Vanellus vanellus breeding success in two continental wetlands
  336. IVF: stars may have to consider the risk of stolen parenthood
  337. Functional Analysis of a Potassium-Chloride Co-Transporter 3 (SLC12A6) Promoter Polymorphism Leading to an Additional DNA Methylation Site
  338. Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping
  339. Structural conservation versus functional divergence of maternally expressed microRNAs in the Dlk1/Gtl2 imprinting region
  340. Computational epigenetics
  341. Optimization of Quantitative MGMT Promoter Methylation Analysis Using Pyrosequencing and Combined Bisulfite Restriction Analysis
  342. The Human Genomic Melting Map
  343. CpG Island Mapping by Epigenome Prediction
  344. CpG Island Methylation in Human Lymphocytes Is Highly Correlated with DNA Sequence, Repeats, and Predicted DNA Structure
  345. BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing