All Stories

  1. R-loops and regulatory changes in chronologically ageing fission yeast cells drive non-random patterns of genome rearrangements
  2. Uncovering natural longevity alleles from intercrossed pools of aging fission yeast cells
  3. RNA metabolism is the primary target of formamide in vivo
  4. Corrigendum: Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes
  5. Faculty of 1000 evaluation for Autonomous metabolic oscillations robustly gate the early and late cell cycle.
  6. A CRISPR/Cas9-based method and primer design tool for seamless genome editing in fission yeast
  7. Schizosaccharomyces pombe Polysome Profile Analysis and RNA Purification
  8. Preparation of Total RNA from Fission Yeast
  9. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes
  10. Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast
  11. A CRISPR/Cas9-based method and primer design tool for seamless genome editing in fission yeast
  12. The copper transport-associated protein Ctr4 can form prion-like epigenetic determinants in Schizosaccharomyces pombe
  13. Faculty of 1000 evaluation for RNA interference is essential for cellular quiescence.
  14. A CRISPR/Cas9-based method and primer design tool for seamless genome editing in fission yeast
  15. Identifying genes required for respiratory growth of fission yeast
  16. Gene dosis and the timing of mitosis
  17. Faculty of 1000 evaluation for A global genetic interaction network maps a wiring diagram of cellular function.
  18. Spotsizer: High-throughput quantitative analysis of microbial growth
  19. CSL protein regulates transcription of genes required to prevent catastrophic mitosis in fission yeast
  20. Identification of nuclear genes affecting 2-Deoxyglucose resistance inSchizosaccharomyces pombe
  21. Php4 Is a Key Player for Iron Economy in Meiotic and Sporulating Cells
  22. The Nrd1-like protein Seb1 coordinates cotranscriptional 3′ end processing and polyadenylation site selection
  23. Faculty of 1000 evaluation for The Yeast Cyclin-Dependent Kinase Routes Carbon Fluxes to Fuel Cell Cycle Progression.
  24. Increasing extracellular H2O2 produces a bi-phasic response in intracellular H2O2, with peroxiredoxin hyperoxidation only triggered once the cellular H2O2-buffering capacity is overwhelmed
  25. Selected Schizosaccharomyces pombe Strains Have Characteristics That Are Beneficial for Winemaking
  26. A central role for TOR signalling in a yeast model for juvenile CLN3 disease
  27. Abo1, a conserved bromodomain AAA-ATPase, maintains global nucleosome occupancy and organisation
  28. AnGeLi: A Tool for the Analysis of Gene Lists from Fission Yeast
  29. Co-Expression Network Models Suggest that Stress Increases Tolerance to Mutations
  30. Ace2 receives helping hand for cell-cycle transcription
  31. Fission Yeast CSL Transcription Factors: Mapping Their Target Genes and Biological Roles
  32. Gene Function Prediction from Functional Association Networks Using Kernel Partial Least Squares Regression
  33. Role of Ccr4-Not complex in heterochromatin formation at meiotic genes and subtelomeres in fission yeast
  34. Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast
  35. Proportionality: A Valid Alternative to Correlation for Relative Data
  36. The genomic and phenotypic diversity of Schizosaccharomyces pombe
  37. Identification of New Players in Cell Division, DNA Damage Response, and Morphogenesis Through Construction of Schizosaccharomyces pombe Deletion Strains
  38. Parallel Profiling of Fission Yeast Deletion Mutants for Proliferation and for Lifespan During Long-Term Quiescence
  39. Natural genetic variation impacts expression levels of coding, non-coding, and antisense transcripts in fission yeast
  40. Gene Ontology Consortium: going forward
  41. PomBase 2015: updates to the fission yeast database
  42. The RNA exosome promotes transcription termination of backtracked RNA polymerase II
  43. Lithium suppresses Aβ pathology by inhibiting translation in an adult Drosophila model of Alzheimer's disease
  44. Regulation of spindle pole body assembly and cytokinesis by the centrin-binding protein Sfi1 in fission yeast
  45. A Novel Histone Deacetylase Complex in the Control of Transcription and Genome Stability
  46. A histone H3K36 chromatin switch coordinates DNA double-strand break repair pathway choice
  47. Contributions of transcription and mRNA decay to gene expression dynamics of fission yeast in response to oxidative stress
  48. LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq
  49. The DNA damage checkpoint pathway promotes extensive resection and nucleotide synthesis to facilitate homologous recombination repair and genome stability in fission yeast
  50. Individual letters of the RNA polymerase II CTD code govern distinct gene expression programs in fission yeast
  51. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth
  52. Faculty of 1000 evaluation for Rate-limiting steps in yeast protein translation.
  53. Genome-wide analysis of poly(A) site selection in Schizosaccharomyces pombe
  54. Spt6 Regulates Intragenic and Antisense Transcription, Nucleosome Positioning, and Histone Modifications Genome-Wide in Fission Yeast
  55. Faculty of 1000 evaluation for Fission Yeast Does Not Age under Favorable Conditions, but Does So after Stress.
  56. Structural and Functional Characterization of the N Terminus of Schizosaccharomyces pombe Cwf10
  57. Faculty of 1000 evaluation for Global analysis of fission yeast mating genes reveals new autophagy factors.
  58. Faculty of 1000 evaluation for Inhibition of AMPK Catabolic Action by GSK3.
  59. Faculty of 1000 evaluation for The inhibition of nonsense mediated RNA decay activates autophagy.
  60. Inhibition of TORC1 signaling and increased lifespan: gained in translation?
  61. FYPO: the fission yeast phenotype ontology
  62. TORC 1 signaling inhibition by rapamycin and caffeine affect lifespan, global gene expression, and cell proliferation of fission yeast
  63. Faculty of 1000 evaluation for Lifespan of neurons is uncoupled from organismal lifespan.
  64. Faculty of 1000 evaluation for Cell Differentiation within a Yeast Colony: Metabolic and Regulatory Parallels with a Tumor-Affected Organism.
  65. Faculty of 1000 evaluation for Heritable remodeling of yeast multicellularity by an environmentally responsive prion.
  66. Faculty of 1000 evaluation for A novel single-cell screening platform reveals proteome plasticity during yeast stress responses.
  67. Faculty of 1000 evaluation for Convergent transcription induces transcriptional gene silencing in fission yeast and mammalian cells.
  68. Extensive Mass Spectrometry-based Analysis of the Fission Yeast Proteome: THE SCHIZOSACCHAROMYCES POMBE PeptideAtlas
  69. Myb-domain protein Teb1 controls histone levels and centromere assembly in fission yeast
  70. Stress induces remodelling of yeast interaction and co-expression networks
  71. RNA-seq
  72. DNA Microarrays
  73. Transcriptome
  74. Cell Cycle Analysis, Expression Profiling
  75. Cell Cycle, Synchronization
  76. Cell Cycle-regulated Gene Expression
  77. Transcriptional Regulatory Network
  78. Gene Ontology Annotations and Resources
  79. Coordinating genome expression with cell size
  80. Quantitative Analysis of Fission Yeast Transcriptomes and Proteomes in Proliferating and Quiescent Cells
  81. Faculty of 1000 evaluation for Bet hedging in yeast by heterogeneous, age-correlated expression of a stress protectant.
  82. Faculty of 1000 evaluation for Genome-wide protein–DNA binding dynamics suggest a molecular clutch for transcription factor function.
  83. Topology of functional networks predicts physical binding of proteins
  84. Cuf2 Is a Novel Meiosis-Specific Regulatory Factor of Meiosis Maturation
  85. Exploring long non-coding RNAs through sequencing
  86. Genome regulation and evolution analysed by next-generation sequencing
  87. Predicting the Fission Yeast Protein Interaction Network
  88. Faculty of 1000 evaluation for Widespread cotranslational formation of protein complexes.
  89. Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast
  90. Histone H3 Lysine 14 Acetylation Is Required for Activation of a DNA Damage Checkpoint in Fission Yeast
  91. Altered nuclear tRNA metabolism in La-deleted Schizosaccharomyces pombe is accompanied by a nutritional stress response involving Atf1p and Pcr1p that is suppressible by Xpo-t/Los1p
  92. The Gene Ontology: enhancements for 2011
  93. PomBase: a comprehensive online resource for fission yeast
  94. Faculty of 1000 evaluation for Commitment to a cellular transition precedes genome-wide transcriptional change.
  95. Faculty of 1000 evaluation for Gametogenesis eliminates age-induced cellular damage and resets life span in yeast.
  96. A Pre-mRNA Degradation Pathway that Selectively Targets Intron-Containing Genes Requires the Nuclear Poly(A)-Binding Protein
  97. A Multidisciplinary, Open Access Platform for Research on Biomolecules
  98. Spt6 Is Required for Heterochromatic Silencing in the Fission Yeast Schizosaccharomyces pombe
  99. N-Termini of Fungal CSL Transcription Factors Are Disordered, Enriched in Regulatory Motifs and Inhibit DNA Binding in Fission Yeast
  100. Mfc1 Is a Novel Forespore Membrane Copper Transporter in Meiotic and Sporulating Cells
  101. Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex
  102. Faculty of 1000 evaluation for Antisense expression increases gene expression variability and locus interdependency.
  103. Faculty of 1000 evaluation for The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation.
  104. Transcriptional and Cellular Responses to Defective Mitochondrial Proteolysis in Fission Yeast
  105. In silico characterization and prediction of global protein-mRNA interactions in yeast
  106. Elimination of a specific histone H3K14 acetyltransferase complex bypasses the RNAi pathway to regulate pericentric heterochromatin functions
  107. H3K9me-Independent Gene Silencing in Fission Yeast Heterochromatin by Clr5 and Histone Deacetylases
  108. Differential patterns of intronic and exonic DNA regions with respect to RNA polymerase II occupancy, nucleosome density and H3K36me3 marking in fission yeast
  109. CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR
  110. A novel function of the mitochondrial transcription factor Mtf1 in fission yeast; Mtf1 regulates the nuclear transcription of srk1
  111. The Roles of Stress-Activated Sty1 and Gcn2 Kinases and of the Protooncoprotein Homologue Int6/eIF3e in Responses to Endogenous Oxidative Stress during Histidine Starvation
  112. A Coordinated Global Control over Cellular Transcription
  113. Specific replication origins promote DNA amplification in fission yeast
  114. Negative Regulation of Meiotic Gene Expression by the Nuclear Poly(a)-binding Protein in Fission Yeast
  115. Vgl1, a multi-KH domain protein, is a novel component of the fission yeast stress granules required for cell survival under thermal stress
  116. Transcriptional Activation of the General Amino Acid Permease Gene per1 by the Histone Deacetylase Clr6 Is Regulated by Oca2 Kinase
  117. Role of Septins in the Orientation of Forespore Membrane Extension during Sporulation in Fission Yeast
  118. The Nuclear Poly(A)-Binding Protein Interacts with the Exosome to Promote Synthesis of Noncoding Small Nucleolar RNAs
  119. Defining transcribed regions using RNA-seq
  120. Faculty of 1000 evaluation for Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants.
  121. Meta-analysis of genome regulation and expression variability across hundreds of environmental and genetic perturbations in fission yeast
  122. The Nuclear Poly(A)-Binding Protein Interacts with the Exosome to Promote Synthesis of Noncoding Small Nucleolar RNAs
  123. An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe
  124. RNA-seq: from technology to biology
  125. A simple method for directional transcriptome sequencing using Illumina technology
  126. Failed gene conversion leads to extensive end processing and chromosomal rearrangements in fission yeast
  127. The Fission Yeast Homeodomain Protein Yox1p Binds to MBF and Confines MBF-Dependent Cell-Cycle Transcription to G1-S via Negative Feedback
  128. Faculty of 1000 evaluation for Coding-sequence determinants of gene expression in Escherichia coli.
  129. Faculty of 1000 evaluation for Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins.
  130. The Fission Yeast HIRA Histone Chaperone Is Required for Promoter Silencing and the Suppression of Cryptic Antisense Transcripts
  131. Global approaches to study gene regulation
  132. TOR Complex 2 Controls Gene Silencing, Telomere Length Maintenance, and Survival under DNA-Damaging Conditions
  133. Cyclin-Dependent Kinase Inhibits Reinitiation of a Normal S-Phase Program during G2 in Fission Yeast
  134. Faculty of 1000 evaluation for Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor.
  135. Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation
  136. Improved tools for efficient mapping of fission yeast genes: identification of microtubule nucleation modifiermod22-1as an allele of chromatin- remodelling factor geneswr1
  137. The S. pombe SAGA complex controls the switch from proliferation to sexual differentiation through the opposing roles of its subunits Gcn5 and Spt8
  138. Next-generation sequencing: applications beyond genomes
  139. Rapidly regulated genes are intron poor
  140. Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation
  141. Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast
  142. Faculty of 1000 evaluation for Stochastic switching as a survival strategy in fluctuating environments.
  143. Int6/eIF3e Promotes General Translation and Atf1 Abundance to Modulate Sty1 MAPK-dependent Stress Response in Fission Yeast
  144. Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
  145. Sites of strong Rec12/Spo11 binding in the fission yeast genome are associated with meiotic recombination and with centromeres
  146. Faculty of 1000 evaluation for A generic mechanism for adaptive growth rate regulation.
  147. Faculty of 1000 evaluation for Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation.
  148. Faculty of 1000 evaluation for Transcription factor substitution during the evolution of fungal ribosome regulation.
  149. Faculty of 1000 evaluation for A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response.
  150. Fission Yeast MAP Kinase Sty1 Is Recruited to Stress-induced Genes
  151. Key Function for the CCAAT-Binding Factor Php4 To Regulate Gene Expression in Response to Iron Deficiency in Fission Yeast
  152. Response of Schizosaccharomyces pombe to Zinc Deficiency
  153. urg1: A Uracil-Regulatable Promoter System for Fission Yeast with Short Induction and Repression Times
  154. Chapter 5 Translational Control of Gene Expression
  155. The BioGRID Interaction Database: 2008 update
  156. Global Role for Polyadenylation-Assisted Nuclear RNA Degradation in Posttranscriptional Gene Silencing
  157. Multiple Pathways Differentially Regulate Global Oxidative Stress Responses in Fission Yeast
  158. Genomic expression patterns in cell separation mutants of Schizosaccharomyces pombe defective in the genes sep10 + and sep15 + coding for the Mediator subunits Med31 and Med8
  159. Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation
  160. A Network of Multiple Regulatory Layers Shapes Gene Expression in Fission Yeast
  161. Genome-Wide Dynamics of SAPHIRE, an Essential Complex for Gene Activation and Chromatin Boundaries
  162. Global transcriptional responses of fission and budding yeast to changes in copper and iron levels: a comparative study
  163. Shaken not stirred: a global research cocktail served in Hinxton
  164. Transcriptional regulatory network for sexual differentiation in fission yeast
  165. Genome-wide characterization of fission yeast DNA replication origins
  166. Global roles of Ste11p, cell type, and pheromone in the control of gene expression during early sexual differentiation in fission yeast
  167. Faculty of 1000 evaluation for Co-evolution of transcriptional and post-translational cell-cycle regulation.
  168. The fission yeast Rpb4 subunit of RNA polymerase II plays a specialized role in cell separation
  169. Upf1, an RNA Helicase Required for Nonsense-Mediated mRNA Decay, Modulates the Transcriptional Response to Oxidative Stress in Fission Yeast
  170. Faculty of 1000 evaluation for Proteome analysis of yeast response to various nutrient limitations.
  171. Faculty of 1000 evaluation for Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise.
  172. YOGY: a web-based, integrated database to retrieve protein orthologs and associated Gene Ontology terms
  173. Faculty of 1000 evaluation for A high-resolution map of transcription in the yeast genome.
  174. Autoregulation of Ribosome Biosynthesis by a Translational Response in Fission Yeast
  175. The more the merrier: comparative analysis of microarray studies on cell cycle-regulated genes in fission yeast
  176. Faculty of 1000 evaluation for Global analysis of protein phosphorylation in yeast.
  177. Probably the best model organism in the world
  178. Simplified primer design for PCR-based gene targeting and microarray primer database: two web tools for fission yeast
  179. Cip1 and Cip2 Are Novel RNA-Recognition-Motif Proteins That Counteract Csx1 Function during Oxidative Stress
  180. Faculty of 1000 evaluation for Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.
  181. Cell-Cycle Control of Gene Expression in Budding and Fission Yeast
  182. Activation of AP-1-Dependent Transcription by a Truncated Translation Initiation Factor
  183. A logical circuit for the regulation of fission yeast growth modes
  184. Post-transcriptional control of gene expression: a genome-wide perspective
  185. Faculty of 1000 evaluation for The TOR and EGO protein complexes orchestrate microautophagy in yeast.
  186. Faculty of 1000 evaluation for Polo kinase links the stress pathway to cell cycle control and tip growth in fission yeast.
  187. Faculty of 1000 evaluation for Dynamic complex formation during the yeast cell cycle.
  188. Faculty of 1000 evaluation for Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.
  189. Faculty of 1000 evaluation for Genomic characterization reveals a simple histone H4 acetylation code.
  190. Impairment of the TFIIH-associated CDK-activating Kinase Selectively Affects Cell Cycle-regulated Gene Expression in Fission Yeast
  191. SCFPof1-ubiquitin and its target Zip1 transcription factor mediate cadmium response in fission yeast
  192. Global Effects on Gene Expression in Fission Yeast by Silencing and RNA Interference Machineries
  193. A Transcriptional Pathway for Cell Separation in Fission Yeast
  194. Expression of a RecQ Helicase Homolog Affects Progression through Crisis in Fission Yeast Lacking Telomerase
  195. Methylation of Histone H4 Lysine 20 Controls Recruitment of Crb2 to Sites of DNA Damage
  196. Global gene expression of fission yeast in response to cisplatin
  197. Periodic gene expression program of the fission yeast cell cycle
  198. Navigating Public Microarray Databases
  199. The Genome and Beyond
  200. Global Gene Expression Responses of Fission Yeast to Ionizing Radiation
  201. Correlations Between Gene Expression and Gene Conservation in Fission Yeast
  202. RNA-binding protein Csx1 mediates global control of gene expression in response to oxidative stress
  203. Gene expression analysis in non small cell lung cancer (NSCLC) using microarray technology
  204. Global Transcriptional Responses of Fission Yeast to Environmental Stress
  205. The transcriptional program of meiosis and sporulation in fission yeast
  206. The Srk1 Protein Kinase Is a Target for the Sty1 Stress-activated MAPK in Fission Yeast
  207. Website Review: How to Get the Best From Fission Yeast Genome Data
  208. Roles of a Fimbrin and an  -Actinin-like Protein in Fission Yeast Cell Polarization and Cytokinesis
  209. Fission yeast Pom1p kinase activity is cell cycle regulated and essential for cellular symmetry during growth and division
  210. Role of Polo Kinase and Mid1p in Determining the Site of Cell Division in Fission Yeast
  211. The Role of Topoisomerase II in Meiotic Chromosome Condensation and Segregation in Schizosaccharomyces pombe
  212. Heterologous modules for efficient and versatile PCR‐based gene targeting in Schizosaccharomyces pombe
  213. Heterologous modules for efficient and versatile PCR-based gene targeting inSchizosaccharomyces pombe
  214. Pom1p, a fission yeast protein kinase that provides positional information for both polarized growth and cytokinesis
  215. Microtubule-driven nuclear movements and linear elements as meiosis-specific characteristics of the fission yeasts Schizosaccharomyces versatilis and Schizosaccharomyces pombe
  216. Dynamics of chromosome organization and pairing during meiotic prophase in fission yeast
  217. Saccharomyces cerevisiae cells lacking the homologous pairing protein p175 SEP1 arrest at pachytene during meiotic prophase
  218. Saccharomyces cerevisiae cells lacking the homologous pairing protein p175 SEP1 arrest at pachytene during meiotic prophase
  219. Homologous recombination in fission yeast: Absence of crossover interference and synaptonemal complex
  220. Unusual nuclear structures in meiotic prophase of fission yeast: a cytological analysis
  221. Synchronized meiosis and recombination in fission yeast: observations with pat1-114 diploid cells