All Stories

  1. Comparison of Protein–Glycosaminoglycan Interactions in ff14sb/GLYCAM06j-1 and CHARMM36m Force Fields
  2. Decoding the Structural and Functional Impact of the Leukaemia-Associated A338V Mutation in GPR183
  3. Energy Landscape Analysis of Membrane Proteins Using NMR-Based Hybrid Restraint Potentials
  4. Energy landscapes of the water hexamer and octamer for the MB-pol and TIP4P/2005 potentials
  5. Visualizing the energy landscape for a molecular dynamics trajectory
  6. Comparison of predictive approaches to the dynamics of activated catalytic processes
  7. Encoding molecular structures in quantum machine learning
  8. Comparison of protein-glycosaminoglycan interactions in ff14sb/GLYCAM06j and CHARMM36m force fields
  9. Visualising the Energy Landscape for a Molecular Dynamics Trajectory
  10. Energy Landscape and Kinetic Analysis of Molecular Dynamics Simulations for Intrinsically Disordered Proteins
  11. Benchmark of Available Explicit Solvent Models in CHARMM36m to Characterize Glycosaminoglycans
  12. The energy landscape of folding in n-C14H30 described by a machine-learned potential
  13. Energy Landscapes of Model Knotted Polymers
  14. Synthesis of covalently linked knotted cage frameworks
  15. Light-Driven Lithium Extraction from Mixtures of Alkali Cations Using an Azobipyridine Ligand
  16. Decoding Solubility Signatures from Amyloid Monomer Energy Landscapes
  17. Energy Landscapes for the Unitary Coupled Cluster Ansatz
  18. Investigation into the effect of phenylalanine gating on anaerobic haem breakdown using the energy landscape approach
  19. Effect of Exact Exchange on the Energy Landscape in Self-Consistent Field Theory
  20. A pseudo-cubic metal–organic cage with conformationally switchable faces for dynamically adaptive guest encapsulation
  21. Guest binding is governed by multiple stimuli in low-symmetry metal-organic cages containing bis-pyridyl(imine) vertices
  22. Vibrational energy landscapes and energy flow in GPCRs: comparison between class A and class B GPCRs using all atom and coarse-grained models
  23. Parp7 generates an ADP-ribosyl degron that controls negative feedback of androgen signaling
  24. Efficient Composite Infrared Spectroscopy: Combining the Double-Harmonic Approximation with Machine Learning Potentials
  25. Double-Bridging Increases the Stability of Zinc(II) Metal–Organic Cages
  26. Design principles for energy transfer in the photosystem II supercomplex from kinetic transition networks
  27. Energy landscapes for clusters of hexapeptides
  28. Vibrational Energy Landscapes and Energy Flow in GPCRs
  29. Explainable Gaussian processes: a loss landscape perspective
  30. Oscillatory Active State of a Pd Nanocatalyst Identified by In Situ Capture of the Instantaneous Structure–Activity Change at the Atomic Scale
  31. Going for Gold(-Standard): Attaining Coupled Cluster Accuracy in Oxide-Supported Nanoclusters
  32. Energy Landscapes and Structural Ensembles of Glucagon-like Peptide-1 Monomers
  33. Energy landscapes for the quantum approximate optimization algorithm
  34. 100 Years of the Lennard-Jones Potential
  35. Multilevel Framework for Analysis of Protein Folding Involving Disulfide Bond Formation
  36. Unusual Facet-Dependent Sintering in Pd–TiO2 Catalysts Revealed by Theory and Experiment
  37. On the Global Minimum of the Classical Potential Energy for Clusters Bound by Many-Body Forces
  38. Complexes of Counterion-Trapped Molecules: Extreme Polarity, Rich IR-Activity, and Internal-Field Moderated Transformations
  39. Effect of Cooling Rate and Molecular Weight on the Non- Isothermal Crystallization of Polyethylene
  40. Insights into machine learning models from chemical physics: an energy landscapes approach (EL for ML)
  41. The energy landscape of Aβ42: a funnel to disorder for the monomer becomes a folding funnel for self-assembly
  42. Analysis and interpretation of first passage time distributions featuring rare events
  43. Combining experiment and energy landscapes to explore anaerobic heme breakdown in multifunctional hemoproteins
  44. Energy landscapes for proteins described by the UNRES coarse-grained potential
  45. Global analysis of energy landscapes for materials modeling: A test case for C60
  46. Exploring energy landscapes for solid-state systems with variable cells at the extended tight-binding level
  47. Exact electronic states with shallow quantum circuits from global optimisation
  48. On the Mechanism of Polaritonic Rate Suppression from Quantum Transition Paths
  49. Triplet-Encoded Prebiotic RNA Aminoacylation
  50. Energy Landscapes and Heat Capacity Signatures for Monomers and Dimers of Amyloid-Forming Hexapeptides
  51. Stable and scalable computation of state visitation probabilities in finite Markov chains
  52. Analysing ill-conditioned Markov chains
  53. Energy landscapes and heat capacity signatures for monomers and dimers of amyloid forming hexapeptides
  54. Energy landscapes and heat capacity signatures for peptides correlate with phase separation propensity
  55. Triplet-encoded prebiotic RNA aminoacylation
  56. Molecular Energy Landscapes of Hardware-Efficient Ansätze in Quantum Computing
  57. Energy Landscapes for Proteins Described by the Unres Coarse-Grained Potential
  58. Energy landscapes and heat capacity signatures for peptides correlate with phase separation propensity
  59. Dynamic Diastereomerism on Chiral Surfaces
  60. Stochastic paths controlling speed and dissipation
  61. Enhancing Biomolecular Simulations with Hybrid Potentials Incorporating NMR Data
  62. Exploiting Sequence-Dependent Rotamer Information in Global Optimization of Proteins
  63. Dynamical Signatures of Multifunnel Energy Landscapes
  64. Author Correction: Nested sampling for physical scientists
  65. Evaluating Geometric Definitions of Stacking for RNA Dinucleoside Monophosphates Using Molecular Mechanics Calculations
  66. Nested sampling for physical scientists
  67. On the capacity and superposition of minima in neural network loss function landscapes
  68. Energy Landscapes for Base-Flipping in a Model DNA Duplex
  69. Energy Landscapes of Carbon Clusters from Tight-Binding Quantum Potentials
  70. Elucidating the solution structure of the K-means cost function using energy landscape theory
  71. The Energy Landscape Perspective: Encoding Structure and Function for Biomolecules
  72. Characterising the area under the curve loss function landscape
  73. Design of self-assembling mesoscopic Goldberg polyhedra
  74. Finite-size scaling and thermodynamics of model supercooled liquids: long-range concentration fluctuations and the role of attractive interactions
  75. Preface
  76. The energy landscape perspective: cutting a Gordian knot
  77. Rotational Dynamics of Desorption: Methane and Ethane at Stepped and Kinked Platinum Surfaces
  78. Energy landscapes for a modified repulsive Weeks–Chandler–Andersen potential
  79. Nearly reducible finite Markov chains: Theory and algorithms
  80. Minimal Design Principles for Icosahedral Virus Capsids
  81. Numerical analysis of first-passage processes in finite Markov chains exhibiting metastability
  82. Graph transformation and shortest paths algorithms for finite Markov chains
  83. Side-Chain Polarity Modulates the Intrinsic Conformational Landscape of Model Dipeptides
  84. Surface Chirality Influences Molecular Rotation upon Desorption
  85. Crystal Structure Prediction for Benzene Using Basin-Hopping Global Optimization
  86. Development of ReaxFF Reactive Force Field for Aqueous Iron–Sulfur Clusters with Applications to Stability and Reactivity in Water
  87. The energy landscapes of bidisperse particle assemblies on a sphere
  88. Optimal dimensionality reduction of Markov chains using graph transformation
  89. Energy Landscapes for Electronic Structure
  90. Systematic Evaluation of ReaxFF Reactive Force Fields for Biochemical Applications
  91. Rare events and first passage time statistics from the energy landscape
  92. Protein energy landscape exploration with structure-based models
  93. Fragility and correlated dynamics in supercooled liquids
  94. Energy Landscape for the Membrane Fusion Pathway in Influenza A Hemagglutinin From Discrete Path Sampling
  95. Why is the training of artificial neural networks so effective?
  96. Improving double-ended transition state searches for soft-matter systems
  97. A well-behaved theoretical framework for ReaxFF reactive force fields
  98. Efficient and exact sampling of transition path ensembles on Markovian networks
  99. Energy Landscapes of Deoxyxylo- and Xylo-Nucleic Acid Octamers
  100. Perspective: new insights from loss function landscapes of neural networks
  101. Affinity-Selected Bicyclic Peptide G-Quadruplex Ligands Mimic a Protein-like Binding Mechanism
  102. Defining, Calculating, and Converging Observables of a Kinetic Transition Network
  103. Perception and recollection of fire hazards in dwelling fires
  104. Counterion‐Trapped‐Molecules: From High Polarity and Enriched IR Spectra to Induced Isomerization
  105. A multifunnel energy landscape encodes the competing α-helix and β-hairpin conformations for a designed peptide
  106. Flip rearrangement in the water pentamer: Analysis of electronic structure
  107. Multifunnel Energy Landscapes for Phosphorylated Translation Repressor 4E-BP2 and Its Mutants
  108. Structural transitions in the RNA 7SK 5′ hairpin and their effect on HEXIM binding
  109. Transforming the Accuracy and Numerical Stability of ReaxFF Reactive Force Fields
  110. Tunneling Splittings in Water Clusters from Path Integral Molecular Dynamics
  111. Energy Landscapes and Hybridization Pathways for DNA Hexamer Duplexes
  112. Identifying mechanistically distinct pathways in kinetic transition networks
  113. Nested Basin-Sampling
  114. Temperature Controls Guest Uptake and Release from Zn4L4 Tetrahedra
  115. The Contribution of Backbone Electrostatic Repulsion to DNA Mechanical Properties is Length-Scale-Dependent
  116. Go-Kit: A Tool To Enable Energy Landscape Exploration of Proteins
  117. Dynamics of an adenine-adenine RNA conformational switch from discrete path sampling
  118. Energy Landscapes for Proteins: From Single Funnels to Multifunctional Systems
  119. Morphological analysis of chiral rod clusters from a coarse-grained single-site chiral potential
  120. Path Integral Energy Landscapes for Water Clusters
  121. Energy Landscape for Fold-Switching in Regulatory Protein RfaH
  122. Computational Investigation of RNA A-Bulges Related to the Microtubule-Associated Protein Tau Causing Frontotemporal Dementia and Parkinsonism
  123. Energy Landscape of the Designed Protein Top7
  124. Intrinsically Disordered Landscapes for Human CD4 Receptor Peptide
  125. Mapping Surface Hydrophobicity of α-Synuclein Oligomers at the Nanoscale
  126. Mutational Basin-Hopping: Combined Structure and Sequence Optimization for Biomolecules
  127. Analysis of the Ub to Ub-CR Transition in Ubiquitin
  128. Effects of random pinning on the potential energy landscape of a supercooled liquid
  129. Proline provides site-specific flexibility for in vivo collagen
  130. Terahertz VRT Spectroscopy of the Water Hexamer-h12 Cage: Dramatic Libration-Induced Enhancement of Hydrogen Bond Tunneling Dynamics
  131. Computational Studies of the Mechanical Stability for Single-Strand Break DNA
  132. Predicting Pathways between Distant Configurations for Biomolecules
  133. Exotic bilayer crystals in a strong magnetic field
  134. Tunneling splittings from path-integral molecular dynamics using a Langevin thermostat
  135. Evolved Minimal Frustration in Multifunctional Biomolecules
  136. Energy Landscapes of Mini-Dumbbell DNA Octanucleotides
  137. Loss surface of XOR artificial neural networks
  138. From sticky-hard-sphere to Lennard-Jones-type clusters
  139. Exploring Energy Landscapes
  140. Designing hierarchical molecular complexity: icosahedra of addressable icosahedra
  141. Terahertz VRT spectroscopy of the water hexamer-d12 prism: Dramatic enhancement of bifurcation tunneling upon librational excitation
  142. Energy Landscapes for the Aggregation of Aβ17–42
  143. Structure, thermodynamics, and rearrangement mechanisms in gold clusters—insights from the energy landscapes framework
  144. Energy Landscape and Pathways for Transitions between Watson–Crick and Hoogsteen Base Pairing in DNA
  145. Kinetics of Molecular Diffusion and Self-Assembly: Glycine on Cu{110}
  146. Structure and Thermodynamics of Metal Clusters on Atomically Smooth Substrates
  147. Pathways for diffusion in the potential energy landscape of the network glass former SiO2
  148. Exploiting sparsity in free energy basin-hopping
  149. Optimal Alignment of Structures for Finite and Periodic Systems
  150. Decoupled Associative and Dissociative Processes in Strong yet Highly Dynamic Host–Guest Complexes
  151. Prediction of early unplanned intensive care unit readmission in a UK tertiary care hospital: a cross-sectional machine learning approach
  152. Multifunctional energy landscape for a DNA G-quadruplex: An evolved molecular switch
  153. Machine learning landscapes and predictions for patient outcomes
  154. Improving Computational Predictions of Single-Stranded RNA Tetramers with Revised α/γ Torsional Parameters for the Amber Force Field
  155. Decoding heat capacity features from the energy landscape
  156. Defining and quantifying frustration in the energy landscape: Applications to atomic and molecular clusters, biomolecules, jammed and glassy systems
  157. What Makes Telomeres Unique?
  158. Transforming the Energy Landscape of a Coiled-Coil Peptide via Point Mutations
  159. Atomic clusters with addressable complexity
  160. A stress tensor eigenvector projection space for the (H2O)5 potential energy surface
  161. Dynamics and thermodynamics of the coronene octamer described by coarse-grained potentials
  162. Energy landscapes and dynamics of glycine on Cu(110)
  163. Energy landscapes for machine learning
  164. Exploring biomolecular energy landscapes
  165. Machine learning prediction for classification of outcomes in local minimisation
  166. Probing helical transitions in a DNA duplex
  167. Properties of kinetic transition networks for atomic clusters and glassy solids
  168. GPU-Accelerated Exploration of Biomolecular Energy Landscapes
  169. Coarse-Grained Simulations Complemented by Atomistic Molecular Dynamics Provide New Insights into Folding and Unfolding of Human Telomeric G-Quadruplexes
  170. Potential energy landscapes of tetragonal pyramid molecules
  171. QTAIM and stress tensor interpretation of the (H2 O)5 potential energy surface
  172. Prediction of Sepsis in the Intensive Care Unit With Minimal Electronic Health Record Data: A Machine Learning Approach
  173. Preventing Structural Rearrangements on Battery Cycling: A First-Principles Investigation of the Effect of Dopants on the Migration Barriers in Layered Li0.5MnO2
  174. Dynamics of a molecular glass former: Energy landscapes for diffusion in ortho-terphenyl
  175. Kinetic Transition Networks for the Thomson Problem and Smale’s Seventh Problem
  176. Energy landscapes for a machine-learning prediction of patient discharge
  177. Conformational Energy Landscape of the Ritonavir Molecule
  178. Energy landscapes for a machine learning application to series data
  179. Concerted hydrogen-bond breaking by quantum tunneling in the water hexamer prism
  180. Energy landscapes and persistent minima
  181. Grand and Semigrand Canonical Basin-Hopping
  182. Rate constants, timescales, and free energy barriers
  183. Coarse-graining the structure of polycyclic aromatic hydrocarbons clusters
  184. Dynamical properties of two- and three-dimensional colloidal clusters of six particles
  185. Energetically favoured defects in dense packings of particles on spherical surfaces
  186. Impurity effects on solid–solid transitions in atomic clusters
  187. Energy landscapes of a hairpin peptide including NMR chemical shift restraints
  188. Energy landscapes of planar colloidal clusters
  189. energy landscapes review
  190. Mode-Specific Chemisorption of CH4 on Pt{110}-(1 × 2) Explored by First-Principles Molecular Dynamics
  191. Physical properties of small water clusters in low and moderate electric fields
  192. Modelling proteins: Conformational sampling and reconstruction of folding kinetics
  193. Self-assembly of anisotropic particles
  194. Chapter 3. Self-Assembly of Nanoclusters: An Energy Landscape Perspective
  195. Virulence-Associated Substitution D222G in the Hemagglutinin of 2009 Pandemic Influenza A(H1N1) Virus Affects Receptor Binding
  196. Transmembrane Structures for Alzheimer’s Aβ1−42 Oligomers
  197. Energy Landscapes of Clusters Bound by Short‐Ranged Potentials
  198. The Energy Landscape, Folding Pathways and the Kinetics of a Knotted Protein
  199. Modelling the internal structure of nascent soot particles
  200. Hydrogen on graphene under stress: Molecular dissociation and gap opening
  201. Energy landscapes: some new horizons
  202. Interpolation schemes for peptide rearrangements
  203. Symmetrization of the AMBER and CHARMM force fields
  204. Emergent Complexity from Simple Anisotropic Building Blocks: Shells, Tubes, and Spirals
  205. Rational design of helical architectures
  206. Global minima of transition metal clusters described by Finnis–Sinclair potentials: A comparison with semi-empirical molecular orbital theory
  207. Stepwise melting of a model glass former under confinement
  208. Mechanisms for H2 Reduction on the PdO{101} Surface and the Pd{100}-(√5 × √5)R27°-O Surface Oxide
  209. Theory of NHx ± H Reactions on Fe{211}
  210. Defect motifs for spherical topologies
  211. Calculating rate constants and committor probabilities for transition networks by graph transformation
  212. Connectivity in the potential energy landscape for binary Lennard-Jones systems
  213. Computer Simulations of Peptides from the p53 DNA Binding Domain
  214. Refined kinetic transition networks for the GB1 hairpin peptide
  215. Simulations of rigid bodies in an angle-axis framework
  216. Energy landscapes for shells assembled from pentagonal and hexagonal pyramids
  217. Spontaneous Self-Assembly of Silica Nanocages into Inorganic Framework Materials
  218. Free energy surfaces from an extended harmonic superposition approach and kinetics for alanine dipeptide
  219. Energy landscapes for diffusion: Analysis of cage-breaking processes
  220. Characterizing the First Steps of Amyloid Formation for the ccβ Peptide
  221. Folding Pathways and Rates for the Three-Stranded β-Sheet Peptide Beta3s using Discrete Path Sampling
  222. Protein structure prediction using basin-hopping
  223. Structural trends in clusters of quadrupolar spheres
  224. Energy landscape of a model discotic liquid crystal
  225. Comment on “Critical analysis of negative heat capacities in nanoclusters” by Michaelian K. and Santamaría-Holek I.
  226. Relaxation of caloric curves on complex potential energy surfaces
  227. Tilted and Helical Columnar Phases for an Axially Symmetric Discoidal System
  228. Implicit Solvent Models and the Energy Landscape for Aggregation of the Amyloidogenic KFFE Peptide
  229. Pathways for Conformational Change in Nitrogen Regulatory Protein C from Discrete Path Sampling
  230. Geometry optimization for peptides and proteins: Comparison of Cartesian and internal coordinates
  231. Thermodynamics and Kinetics of Aggregation for the GNNQQNY Peptide
  232. Comparison of double-ended transition state search methods
  233. Helix Self-Assembly from Anisotropic Molecules
  234. Equilibrium density of states and thermodynamic properties of a model glass former
  235. Geometric magic numbers of sodium clusters: Interpretation of the melting behaviour
  236. Energy landscapes for water clusters in a uniform electric field
  237. Theory of C2Hx species on Pt{110} (1×2): Reaction pathways for dehydrogenation
  238. Structure and dynamics of spherical crystals characterized for the Thomson problem
  239. Thermodynamics of water octamer in a uniform electric field
  240. Correlation effects and super-Arrhenius diffusion in binary Lennard-Jones mixtures
  241. Potential Energy and Free Energy Landscapes
  242. Graph transformation method for calculating waiting times in Markov chains
  243. Global Potential Energy Minima of C60(H2O)n Clusters
  244. Kinetic analysis of discrete path sampling stationary point databases
  245. Theory of C2Hx Species on Pt{110}(1 × 2):  Structure, Stability, and Thermal Chemistry
  246. Super-Arrhenius Diffusion in an Undercooled Binary Lennard-Jones Liquid Results from a Quantifiable Correlation Effect
  247. Equilibrium thermodynamics from basin-sampling
  248. Energy landscapes: calculating pathways and rates
  249. Global optimization and folding pathways of selected α-helical proteins
  250. Novel Structural Motifs in Clusters of Dipolar Spheres:  Knots, Links, and Coils
  251. Energy landscapes and properties of biomolecules
  252. Global minima for water clusters (H2O) , n⩽ 21, described by a five-site empirical potential
  253. Diagnosing broken ergodicity using an energy fluctuation metric
  254. Influence of vibrational energy flow on isomerization of flexible molecules: Incorporating non-Rice-Ramsperger-Kassel-Marcus kinetics in the simulation of dipeptide isomerization
  255. Pathways for dissociative ethane chemisorption on Pt{1 1 0} (1 × 2) using density functional theory
  256. Finite-size effects in the dynamics and thermodynamics of two-dimensional Coulomb clusters
  257. Global minima and energetics of Li+(H2O) and Ca2+(H2O) clusters for n⩽ 20
  258. An ab initio study of tunneling splittings in the water trimer
  259. EXPLORING THE ENERGY LANDSCAPE
  260. Global minima of (C60) Ca2+, (C60) F− and (C60) I− clusters
  261. Finding pathways between distant local minima
  262. Publisher's Note: Pathways for dissociative methane chemisorption on Pt{110}-(1×2) [Phys. Rev. B71, 113410 (2005)]
  263. Protonated water clusters described by an empirical valence bond potential
  264. Pathways for dissociative methane chemisorption onPt{110}<...
  265. Stacked Clusters of Polycyclic Aromatic Hydrocarbon Molecules
  266. How many dimensions are required to approximate the potential energy landscape of a model protein?
  267. Symmetry and density functionals
  268. Energy Landscapes, Self‐Assembly and Viruses
  269. Lowest-energy structures of (C60)nX (X=Li+,Na+,K+,Cl−) and (C60)nYCl (Y=Li,Na,K) clusters for n⩽13
  270. Archetypal energy landscapes: Dynamical diagnosis
  271. The energy landscape as a unifying theme in molecular science
  272. Effect of salt bridges on the energy landscape of a model protein
  273. Analysis of cooperativity and localization for atomic rearrangements
  274. Folding of the GB1 hairpin peptide from discrete path sampling
  275. New results for phase transitions from catastrophe theory
  276. Some further applications of discrete path sampling to cluster isomerization
  277. Comparison of kinetic Monte Carlo and molecular dynamics simulations of diffusion in a model glass former
  278. Supercooled Lennard-Jones liquids and glasses: a kinetic Monte Carlo approach
  279. Erratum: A doubly nudged elastic band method for finding transition states [J. Chem. Phys. 120, 2082 (2004)]
  280. An ab initio study of tunneling splittings in the water dimer
  281. A doubly nudged elastic band method for finding transition states
  282. A Coarse-Graining of Energy Landscape of Proteins — structural stability of the most stable states
  283. The dynamics of conformational isomerization in flexible biomolecules. II. Simulating isomerizations in a supersonic free jet with master equation dynamics
  284. Stationary points and dynamics in high-dimensional systems
  285. The free energy landscape and dynamics of met-enkephalin
  286. Density effects in a bulk binary Lennard-Jones system
  287. Global minima for rare gas clusters containing one alkali metal ion
  288. Ab initio study of rearrangements between C60 fullerenes
  289. Correlated ab Initio Study of Nucleic Acid Bases and Their Tautomers in the Gas Phase, in a Microhydrated Environment and in Aqueous Solution. Guanine:  Surprising Stabilization of Rare Tautomers in Aqueous Solution
  290. Theoretical study of finite-temperature spectroscopy in van der Waals clusters. II. Time-dependent absorption spectra
  291. Comment on “Quasisaddles as relevant points of the potential energy surface in the dynamics of supercooled liquids” [J. Chem. Phys. 116, 10297 (2002)]
  292. Energy landscapes of model glasses. II. Results for constant pressure
  293. Free energy landscapes of model peptides and proteins
  294. The favored cluster structures of model glass formers
  295. Exploring Energy Landscapes with Monte Carlo Methods
  296. The infrared and ultraviolet spectra of single conformations of methyl-capped dipeptides: N-acetyl tryptophan amide and N-acetyl tryptophan methyl amide
  297. Bifurcation tunneling dynamics in the water trimer
  298. Equilibrium properties of clusters in the harmonic superposition approximation
  299. Discrete path sampling
  300. Theoretical study of rearrangements in water dimer and trimer
  301. Energy landscapes of model polyalanines
  302. Diatomics-in-molecules potentials incorporating ab initio data: Application to ionic, Rydberg-excited, and molecule-doped rare gas clusters
  303. Multireference perturbation study of ClF4+
  304. Saddle points and dynamics of Lennard-Jones clusters, solids, and supercooled liquids
  305. Collapse of Lennard-Jones homopolymers: Size effects and energy landscapes
  306. Correlated ab initio study of nucleic acid bases and their tautomers in the gas phase, in a microhydrated environment and in aqueous solution : Part 1. Cytosine
  307. Characterization of anharmonicities on complex potential energy surfaces: Perturbation theory and simulation
  308. Modeling the structure of clusters ofC60molecules
  309. Crystals of binary Lennard-Jones solids
  310. A Microscopic Basis for the Global Appearance of Energy Landscapes
  311. Comment on “Effect of Potential Energy Distribution on the Melting of Clusters”
  312. Taking a Walk on a Landscape
  313. Energy landscapes of some model glass formers
  314. Polytetrahedral Clusters
  315. Transition states and rearrangement mechanisms from hybrid eigenvector-following and density functional theory.
  316. Dynamics and thermodynamics of supercooled liquids and glasses from a model energy landscape
  317. Quantum partition functions from classical distributions: Application to rare-gas clusters
  318. Energy landscapes, global optimization and dynamics of the polyalanine Ac(ala)8NHMe
  319. Global optimization and the energy landscapes of Dzugutov clusters
  320. Potential energy surfaces and coordinate dependence
  321. Global minima of protonated water clusters
  322. Molecule-doped rare gas clusters: structure and stability of ArnNO(X2Π1/2/3/2),n≤ 25, from newab initiopotential energy surfaces of ArNO
  323. Energy Landscapes: From Clusters to Biomolecules
  324. The dynamics of structural transitions in sodium chloride clusters
  325. Evolution of the potential energy surface with size for Lennard-Jones clusters
  326. Rearrangements and tunneling splittings of protonated water trimer
  327. Energy landscape of a model protein
  328. Structural relaxation in atomic clusters: Master equation dynamics
  329. Global Optimization of Clusters, Crystals, and Biomolecules
  330. Rearrangements and tunneling splittings of protonated water dimer
  331. Rydberg excitations in rare gas clusters: structure and electronic spectra of Ar*n(3 ≤n≤ 25)
  332. The double-funnel energy landscape of the 38-atom Lennard-Jones cluster
  333. Defect migration in crystalline silicon
  334. Structural transitions and global minima of sodium chloride clusters
  335. Structural relaxation in Morse clusters: Energy landscapes
  336. Thermodynamics and the global optimization of Lennard-Jones clusters
  337. Relaxation dynamics of C60
  338. Archetypal energy landscapes
  339. Infrared spectra of argon clusters
  340. Influence of the atom–atom interaction anisotropy on the structure and stability of Ar Cl2 clusters
  341. Global minima of water clusters (H2O) , n≤21, described by an empirical potential
  342. Structure and properties of Nen+;clusters from a diatomics-in-molecules approach
  343. Symmetry, near-symmetry and energetics
  344. Thermodynamics of Global Optimization
  345. Global minima for transition metal clusters described by Sutton–Chen potentials
  346. Isomerization dynamics and ergodicity in Ar7
  347. Reactions of size-selected positively charged nickel clusters with carbon monoxide in molecular beams
  348. Global Optimization by Basin-Hopping and the Lowest Energy Structures of Lennard-Jones Clusters Containing up to 110 Atoms
  349. Effects of three-body (Axilrod-Teller) forces on the classical and quantum behavior of rare-gas trimers
  350. Structural predictions for (C60) clusters with an all-atom potential
  351. Theoretical study of the water tetramer
  352. Comment on “Relaxation of collective excitations in LJ-13 cluster” [J. Chem. Phys. 105, 3679 (1996)]
  353. Thermally-induced surface reconstructions of Mackay icosahedra
  354. Surveying a potential energy surface by eigenvector-following
  355. Comparison of reaction pathways calculated by different algorithms for disilane and water trimer
  356. Fluctuation, relaxation and rearrangement dynamics of a model (H2O)20 cluster: Non-statistical dynamical behavior
  357. Gradient Line Reaction Paths for Hindered Internal Rotation in H2BNH2and Inversion in PF3
  358. Structure, dynamics, and thermodynamics of benzene-Arn clusters (1⩽n⩽8 and n=19)
  359. Structural consequences of the range of the interatomic potential A menagerie of clusters
  360. Rearrangements of bulk face-centred-cubic nickel modelled by a Sutton[ndash ]Chen potential
  361. The effect of the range of the potential on the structure and stability of simple liquids: from clusters to bulk, from sodium to
  362. On potential energy surfaces and relaxation to the global minimum
  363. The structure of (C60) clusters
  364. Theoretical study of the water pentamer
  365. Structure, rearrangements and evaporation of rotating atomic clusters
  366. Structure, rearrangements and evaporation of rotating atomic clusters
  367. Theoretical study of rapid topomerization in tetracyclo[4.4.4.4]-1-bora-3,5-diazapentane
  368. From Topographies to Dynamics on Multidimensional Potential Energy Surfaces of Atomic Clusters
  369. Structure, Dynamics, and Thermodynamics of Clusters: Tales from Topographic Potential Surfaces
  370. The Structure and Stability of Atomic Liquids: From Clusters to Bulk
  371. Theoretical Predictions of Structure and Thermodynamics in the Large Cluster Regime
  372. What can calculations employing empirical potentials teach us about bare transition-metal clusters?
  373. Rearrangements of the water trimer
  374. Changes of Morphology and Capping of Model Transition Metal Clusters
  375. Magic numbers and growth sequences of small face-centred-cubic and decahedral clusters
  376. Magic numbers and growth sequences of small face-centered-cubic and decahedral clusters
  377. The effect of the range of the potential on the structures of clusters
  378. Coexistence and phase separation in clusters: From the small to the not-so-small regime
  379. Gradient paths of the reactions of electrophilic addition of HF to ethylene and 1,2 H-shift in H2PN
  380. An order parameter approach to coexistence in atomic clusters
  381. Calculation of thermodynamic properties of small Lennard-Jones clusters incorporating anharmonicity
  382. Potential energy surfaces of several van der Waals complexes modelled using distributed multipoles
  383. Empirical Correlations between Thermodynamic Properties and Intermolecular Forces
  384. Potential energy surfaces of van der Waals complexes of water and hydrogen halides modeled using distributed multipoles
  385. Reaction path zero-point energy from diffusion Monte Carlo calculations
  386. Coexistence in Finite Systems
  387. Rearrangements in model face-centered-cubic solids
  388. Rearrangements of 55-atom Lennard-Jones and (C60)55 clusters
  389. Gradient Line Reaction Path for an SN2 Reaction at Neutral Nitrogen
  390. Free energy barriers to melting in atomic clusters
  391. Electronic structure of small silicon clusters
  392. Gradient line reaction path of HF addition to ethylene
  393. Transition vector symmetry and the internal pseudo-rotation and inversion paths of CIF4 +
  394. Clusters of C60 molecules
  395. Gradient-line reaction paths for 1,2, H shift reactions in phosphinonitrene and formaldehyde, and H2 elimination from formaldehyde
  396. Topography of potential-energy surfaces for Van der Waals complexes
  397. Ab initio calculation of molecular structure by expansion of the electron density
  398. Some estimates of tunneling splittings in small clusters
  399. Theoretical study of water trimer
  400. Rearrangements of model (H2O)8 and (H2O)20 clusters
  401. Structure, dynamics, and thermodynamics of model (H2O)8 and (H2O)20 clusters
  402. Structure and dynamics of model metal clusters
  403. Structure and dynamics of model Ag and Pt clusters
  404. Structure, dynamics and thermodynamics of small particles and inorganic clusters
  405. Rearrangement mechanisms of B12H122- and C2B10H12
  406. Locating stationary points for clusters in cartesian coordinates
  407. Structure and rearrangements of small trapped-ion clusters
  408. Coexistence in small inert gas clusters
  409. Some further restrictions on the geometries of transition states
  410. Ab initio studies of fundamental cluster rearrangement mechanisms
  411. Structure and energetics of model metal clusters
  412. Structure and energetics of model symmetric and asymmetric decahedra
  413. When do gradient optimisations converge to saddle points?
  414. Chaos in small clusters of inert gas atoms
  415. Systematic investigation of the structures and rearrangements of six-atom clusters bound by a model anisotropic potential
  416. Limitations of the Murrell–Laidler theorem
  417. Spectroscopic signature of fractal excitons
  418. Structures and rearrangements of model silicon clusters
  419. Simulated transmission electron microscope images and characterisation of concentric shell and icospiral graphitic microparticles
  420. Basins of attraction for stationary points on a potential-energy surface
  421. Theoretical study of some small van der Waals complexes containing inert gas atoms
  422. Local interpretation of chaotic dynamics in a many-body classical Hamiltonian system (Ar3)
  423. Calculating the rate of loss of information from chaotic time series by forecasting
  424. Stable configurations of confined cold ionic systems.
  425. Packing schemes for Lennard-Jones clusters of 13 to 150 atoms: minima, transition states and rearrangement mechanisms
  426. Instantaneous normal mode analysis and coexistence phenomena in small clusters
  427. Qualitative models for the NMR chemical shifts of interstitial atoms in clusters
  428. How the range of pair interactions governs features of multidimensional potentials
  429. Balanced geometries and structural trends in covalent, ionic, and van der Waals clusters
  430. Exploring potential energy surfaces with transition state calculations
  431. Freezing, melting, spinodals, and clusters
  432. Melting and freezing of small argon clusters
  433. Transition states for Ar55
  434. Structural and topological consequences of anisotropic interactions in clusters
  435. Clusters in inorganic and molecular beam chemistry. Some unifying principles
  436. Nickel carbonyl clusters in molecular beams: a reinterpretation of the results which gives circumstantial evidence for a face-capping cluster-growth sequence
  437. Finding saddle points for clusters
  438. Freezing, melting, spinodals, and clusters
  439. Bonding in transition-metal clusters
  440. Skeletal rearrangements in clusters. 2
  441. Splitting of cluster orbitals
  442. Structure and growth of colloidal metal particles
  443. Hybridization schemes for clusters
  444. Skeletal rearrangements in clusters—III. Application of vibrational symmetry analyses
  445. Closed-shell structures and the building game
  446. Theoretical study of rearrangements in boranes
  447. A new structural tensor surface harmonic bonding theory
  448. Theoretical studies of icosahedral C60 and some related species
  449. Overcoming Energetic and Time Scale Barriers Using the Potential Energy Surface