All Stories

  1. Complete Genome Sequence of Campylobacter jejuni Strain G1, Isolated from a Patient with Guillain-Barré Syndrome

    Article • Microbiology Resource Announcements, July 2021, ASM Journals

    Andrey Karlyshev

  2. Draft Genome Sequence of Coralloluteibacterium stylophorae LMG 29479 T

    Article • Microbiology Resource Announcements, July 2021, ASM Journals

    Andrey Karlyshev

  3. Biotechnological and Ecological Potential of Micromonospora provocatoris sp. nov., a Gifted Strain Isolated from the Challenger Deep of the Mariana Trench

    Article • Marine Drugs, April 2021, MDPI AG

    Andrey Karlyshev

  4. Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters

    Article • Marine Genomics, December 2020, Elsevier

    Andrey Karlyshev

  5. The Effectiveness of Potential Probiotics Lactobacillus rhamnosus Vahe and Lactobacillus delbrueckii IAHAHI in Irradiated Rats Depends on the Nutritional Stage of the Host

    Article • Probiotics and Antimicrobial Proteins, May 2020, Springer Science + Business Media

    Andrey Karlyshev

  6. S-layer protein 2 of Lactobacillus crispatus 2029, its structural and immunomodulatory characteristics and roles in protective potential of the whole bacteria against foodborne pathogens

    Article • International Journal of Biological Macromolecules, May 2020, Elsevier

    Andrey Karlyshev

  7. Whole Genome Sequence of Dermacoccus abyssi MT1.1 Isolated from the Challenger Deep of the Mariana Trench Reveals Phenazine Biosynthesis Locus and Environmental Adaptation Factors

    Article • Marine Drugs, February 2020, MDPI AG

    Andrey Karlyshev

  8. Corrigendum: Variant Signal Peptides of Vaccine Antigen, FHbp, Impair Processing Affecting Surface Localization and Antibody-Mediated Killing in Most Meningococcal Isolates

    Article • Frontiers in Microbiology, February 2020, Frontiers

    Andrey Karlyshev

  9. Variant Signal Peptides of Vaccine Antigen, FHbp, Impair Processing Affecting Surface Localization and Antibody-Mediated Killing in Most Meningococcal Isolates

    Article • Frontiers in Microbiology, December 2019, Frontiers

    Andrey Karlyshev

  10. Whole-Genome Sequencing of Xanthomonadaceae Strain Alg18-2.2, Isolated from the Saline Lake Gudzhirganskoe in the Republic of Buryatia, Russia

    Article • Microbiology Resource Announcements, November 2019, ASM Journals

    Andrey Karlyshev

  11. Cationic amphiphiles against Gardnerella vaginalis resistant strains and bacterial vaginosis-associated pathogens

    Article • Pathogens and Disease, October 2019, Oxford University Press (OUP)

    Andrey Karlyshev

  12. Expression of Escherichia coli araE and modified lacY genes in Campylobacter jejuni is not sufficient for arabinose transport

    Article • Access Microbiology, July 2019, Society for General Microbiology

    Andrey Karlyshev

  13. Remarkable Features of Mitochondrial DNA of Acanthamoeba polyphaga Linc Ap-1, Revealed by Whole-Genome Sequencing

    Article • Microbiology Resource Announcements, June 2019, ASM Journals

    Andrey Karlyshev

  14. Binding of LcrV protein from Yersinia pestis to human T-cells induces apoptosis, which is completely blocked by specific antibodies

    Article • International Journal of Biological Macromolecules, February 2019, Elsevier

    Andrey Karlyshev

  15. CmeABC Multidrug Efflux Pump Contributes to Antibiotic Resistance and Promotes Campylobacter jejuni Survival and Multiplication in Acanthamoeba polyphaga

    Article • Applied and Environmental Microbiology, September 2017, ASM Journals

    Andrey Karlyshev

  16. Lactobacillus fermentum 3872 as a potential tool for combatting Campylobacter jejuni infections

    Article • Virulence, August 2017, Taylor & Francis

    Andrey Karlyshev

  17. The hidden perils of read mapping as a quality assessment tool in genome sequencing

    Article • Scientific Reports, February 2017, Springer Science + Business Media

    Andrey Karlyshev

  18. Potential probiotic-associated traits revealed from completed high quality genome sequence of Lactobacillus fermentum 3872

    Article • Standards in Genomic Sciences, February 2017, Springer Science + Business Media

    Andrey Karlyshev

  19. Characterization of Lactobacillus fermentum UCO-979C, a probiotic strain with a potent anti-Helicobacter pylori activity

    Article • Electronic Journal of Biotechnology, January 2017, Elsevier

    Andrey Karlyshev

  20. The role of apolipoprotein N-acyl transferase, Lnt, in the lipidation of factor H binding protein of Neisseria meningitidis strain MC58 and its potential as a drug target

    Article • British Journal of Pharmacology, December 2016, Wiley

    Dr ali ryan, Andrey Karlyshev

  21. YPTB3816 of Yersinia pseudotuberculosis strain IP32953 is a virulence-related metallo-oligopeptidase

    Article • BMC Microbiology, November 2016, Springer Science + Business Media

    Andrey Karlyshev

  22. Draft Genome Sequence of “ Cohnella kolymensis ” B-2846

    Article • Genome Announcements, January 2016, ASM Journals

    Andrey Karlyshev

  23. Draft Genome Sequence of Lactobacillus plantarum 2025

    Article • Genome Announcements, January 2016, ASM Journals

    Andrey Karlyshev

  24. Draft Genome Sequence of a Probiotic Strain, Lactobacillus fermentum UCO-979C

    Article • Genome Announcements, December 2015, ASM Journals

    Andrey Karlyshev, Dr Julio Villena

  25. Campylobacter–Acanthamoeba interactions

    Article • Microbiology, May 2015, Society for General Microbiology

    Andrey Karlyshev

  26. Lactobacillus fermentum 3872 genome sequencing reveals plasmid and chromosomal genes potentially involved in a probiotic activity

    Article • FEMS Microbiology Letters, April 2015, Oxford University Press (OUP)

    Andrey Karlyshev

  27. Insight into proteomic investigations of Neisseria meningitidis serogroup C strain L91543 from analysis of its genome sequence

    Article • FEMS Microbiology Letters, April 2015, Oxford University Press (OUP)

    Andrey Karlyshev, Lori Snyder

  28. Specific genetic features of Campylobacter jejuni strain G1 revealed by genome sequencing

    Article • FEMS Microbiology Letters, February 2015, Oxford University Press (OUP)

    Andrey Karlyshev

  29. Probiotic Properties of Lactobacillus crispatus 2,029: Homeostatic Interaction with Cervicovaginal Epithelial Cells and Antagonistic Activity to Genitourinary Pathogens

    Article • Probiotics and Antimicrobial Proteins, July 2014, Springer Science + Business Media

    Andrey Karlyshev, Head, Health Promoting Naturals Laboratory, Dr. Michael Leonidas Chikindas

  30. Draft Genome Sequence of Bacillus subtilis strain KATMIRA1933

    Article • Genome Announcements, June 2014, ASM Journals

    Andrey Karlyshev, Head, Health Promoting Naturals Laboratory, Dr. Michael Leonidas Chikindas

  31. Draft Genome Sequence of Bacillus amyloliquefaciens B-1895

    Article • Genome Announcements, June 2014, ASM Journals

    Andrey Karlyshev

  32. Draft Genome Sequence of Enterococcus faecalis MB5259

    Article • Genome Announcements, June 2014, ASM Journals

    Andrey Karlyshev, Prof. Dr. Marc Heyndrickx

  33. A negative effect of Campylobacter capsule on bacterial interaction with an analogue of a host cell receptor

    Article • BMC Microbiology, May 2014, Springer Science + Business Media

    Andrey Karlyshev

  34. Campylobacter jejuni Capsular Polysaccharide

    Article • April 2014, ASM Journals

    Andrey Karlyshev

  35. Draft Genome Sequence of Lactobacillus crispatus 2029

    Article • Genome Announcements, February 2014, ASM Journals

    Andrey Karlyshev

  36. Draft Genome Sequence of Lactobacillus rhamnosus 2166

    Article • Genome Announcements, February 2014, ASM Journals

    Andrey Karlyshev

  37. Biological Roles of the O-Methyl Phosphoramidate Capsule Modification in Campylobacter jejuni

    Article • PLoS ONE, January 2014, PLOS

    Andrey Karlyshev

  38. Draft Genome Sequence of Lactobacillus plantarum 2165

    Article • Genome Announcements, January 2014, ASM Journals

    Andrey Karlyshev

  39. Campylobacter jejunigenecj0511encodes a serine peptidase essential for colonisation

    Article • FEBS Open Bio, January 2014, Wiley

    Andrey Karlyshev

  40. Draft Genome Sequence of Lactobacillus jensenii Strain MD IIE-70(2)

    Article • Genome Announcements, November 2013, ASM Journals

    Andrey Karlyshev

  41. Draft Genome Sequence of Lactobacillus fermentum Strain 3872

    Article • Genome Announcements, November 2013, ASM Journals

    Andrey Karlyshev

  42. Draft Genome Sequence of Corynebacterium pseudodiphtheriticum Strain 090104 "Sokolov"

    Article • Genome Announcements, November 2013, ASM Journals

    Andrey Karlyshev

  43. Draft Genome Sequence of Lactobacillus gasseri Strain 2016

    Article • Genome Announcements, August 2013, ASM Journals

    Andrey Karlyshev

  44. Unusual features in organisation of capsular polysaccharide-related genes of C. jejuni strain X

    Article • Gene, June 2013, Elsevier

    Andrey Karlyshev, Professor Julian Parkhill

  45. Molecular mechanisms and biological role ofCampylobacter jejuniattachment to host cells

    Article • European Journal of Microbiology and Immunology, March 2012, Akademiai Kiado

    Andrey Karlyshev

  46. Putative mechanisms and biological role of coccoid form formation inCampylobacter jejuni

    Article • European Journal of Microbiology and Immunology, March 2012, Akademiai Kiado

    Andrey Karlyshev

  47. Yersinia pseudotuberculosis mntH functions in intracellular manganese accumulation, which is essential for virulence and survival in cells expressing functional Nramp1

    Article • Microbiology, December 2010, Society for General Microbiology

    Andrey Karlyshev

  48. Insect Infection Model forCampylobacter jejuniReveals ThatO‐methyl Phosphoramidate Has Insecticidal Activity

    Article • The Journal of Infectious Diseases, January 2010, Oxford University Press (OUP)

    Andrey Karlyshev

  49. Steps toward broad-spectrum therapeutics: discovering virulence-associated genes present in diverse human pathogens

    Article • BMC Genomics, October 2009, Springer Science + Business Media

    Andrey Karlyshev

  50. Galleria mellonella as an alternative infection model for Yersinia pseudotuberculosis

    Article • Microbiology, April 2009, Society for General Microbiology

    Andrey Karlyshev

  51. Campylobacter jejuni Glycosylation Island Important in Cell Charge, Legionaminic Acid Biosynthesis, and Colonization of Chickens

    Article • Infection and Immunity, March 2009, ASM Journals

    Andrey Karlyshev

  52. Campylobacter jejuni Cocultured with Epithelial Cells Reduces Surface Capsular Polysaccharide Expression

    Article • Infection and Immunity, March 2009, ASM Journals

    Andrey Karlyshev, Dr Marguerite Clyne

  53. Commonality and Biosynthesis of theO-Methyl Phosphoramidate Capsule Modification inCampylobacter jejuni

    Article • Journal of Biological Chemistry, August 2007, American Society for Biochemistry & Molecular Biology (ASBMB)

    Andrey Karlyshev

  54. Biofilm formation in Campylobacter jejuni

    Article • Microbiology, February 2006, Society for General Microbiology

    Andrey Karlyshev

  55. Development and Application of an Insertional System for Gene Delivery and Expression in Campylobacter jejuni

    Article • Applied and Environmental Microbiology, July 2005, ASM Journals

    Andrey Karlyshev

  56. TheCampylobacter jejuniglycome

    Article • FEMS Microbiology Reviews, April 2005, Oxford University Press (OUP)

    Andrey Karlyshev

  57. The glycome

    Article • FEMS Microbiology Reviews, April 2005, Wiley

    Andrey Karlyshev

  58. Functional analysis of theCampylobacter jejuniN-linked protein glycosylation pathway

    Article • Molecular Microbiology, February 2005, Wiley

    Andrey Karlyshev

  59. Analysis of Campylobacter jejuni capsular loci reveals multiple mechanisms for the generation of structural diversity and the ability to form complex heptoses

    Article • Molecular Microbiology, October 2004, Wiley

    Andrey Karlyshev, Professor Warren Wakarchuk, Professor Julian Parkhill

  60. Adaptation of Campylobacter jejuni NCTC11168 to High-Level Colonization of the Avian Gastrointestinal Tract

    Article • Infection and Immunity, July 2004, ASM Journals

    Andrey Karlyshev

  61. The Campylobacter jejuni general glycosylation system is important for attachment to human epithelial cells and in the colonization of chicks

    Article • Microbiology, June 2004, Society for General Microbiology

    Andrey Karlyshev

  62. Signature-tagged Mutagenesis of Yersinia pestis

    Article • January 2004, Springer Science + Business Media

    Andrey Karlyshev

  63. A Caenorhabditis elegans model of Yersinia infection: biofilm formation on a biotic surface

    Article • Microbiology, November 2003, Society for General Microbiology

    Andrey Karlyshev

  64. Genetic and biochemical evidence of a Campylobacter jejuni capsular polysaccharide that accounts for Penner serotype specificity

    Article • Molecular Microbiology, April 2002, Wiley

    Andrey Karlyshev

  65. Identification of N-acetylgalactosamine-containing glycoproteins PEB3 and CgpA in Campylobacter jejuni

    Article • Molecular Microbiology, March 2002, Wiley

    Andrey Karlyshev

  66. A novel paralogous gene family involved in phase-variable flagella-mediated motility in Campylobacter jejuni

    Article • Microbiology, February 2002, Society for General Microbiology

    Andrey Karlyshev

  67. Further strategies for signature-tagged mutagenesis and the application of oligonucleotide microarrays for the quantification of DNA-tagged strains

    Article • January 2002, Elsevier

    Andrey Karlyshev

  68. Application of High-Density Array-Based Signature-Tagged Mutagenesis To Discover Novel YersiniaVirulence-Associated Genes

    Article • Infection and Immunity, December 2001, ASM Journals

    Andrey Karlyshev

  69. Genome sequence of Yersinia pestis, the causative agent of plague

    Article • Nature, October 2001, Springer Science + Business Media

    Andrey Karlyshev

  70. Whole Genome Comparison of Campylobacter jejuni Human Isolates Using a Low-Cost Microarray Reveals Extensive Genetic Diversity

    Article • Genome Research, September 2001, Cold Spring Harbor Laboratory Press

    Andrey Karlyshev

  71. Demonstration of Polysaccharide Capsule in Campylobacter jejuni Using Electron Microscopy

    Article • Infection and Immunity, September 2001, ASM Journals

    Andrey Karlyshev

  72. Post genome analysis of Campylobacter jejuni

    Article • Journal of Applied Microbiology, June 2001, Wiley

    Andrey Karlyshev

  73. Deciphering Campylobacter jejuni cell surface interactions from the genome sequence

    Article • Current Opinion in Microbiology, February 2001, Elsevier

    Andrey Karlyshev

  74. Detection and Initial Characterization of Novel Capsular Polysaccharide among Diverse Campylobacter jejuni Strains Using Alcian Blue Dye

    Article • Journal of Clinical Microbiology, January 2001, ASM Journals

    Andrey Karlyshev

  75. Multiple N-acetyl neuraminic acid synthetase (neuB) genes in Campylobacter jejuni: identification and characterization of the gene involved in sialylation of lipo-oligosaccharide

    Article • Molecular Microbiology, March 2000, Wiley

    Andrey Karlyshev

  76. The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences

    Article • Nature, February 2000, Springer Science + Business Media

    Andrey Karlyshev

  77. An improved physical and genetic map of Campylobacter jejuni NCTC 11168 (UA580)

    Article • Microbiology, February 1998, Society for General Microbiology

    Andrey Karlyshev

  78. Influence of the conserved disulphide bond, exposed to the putative binding pocket, on the structure and function of the immunoglobulin-like molecular chaperone Caf1M ofYersinia pestis

    Article • Biochemical Journal, June 1997, Portland Press Ltd.

    Andrey Karlyshev

  79. Reception of human interleukin-1β by bacterial cells

    Article • Immunology Letters, May 1997, Elsevier

    Andrey Karlyshev

  80. Study of the intergenic exeF-exeG region and its application as a simple preliminary test for Aeromonas spp.

    Article • FEMS Microbiology Letters, March 1996, Oxford University Press (OUP)

    Andrey Karlyshev

  81. Study of the intergenicexeF-exeGregion and its application as a simple preliminary test forAeromonasspp.

    Article • FEMS Microbiology Letters, March 1996, Oxford University Press (OUP)

    Andrey Karlyshev

  82. Specific high affinity binding of human interleukin 1β by Caf1A usher protein ofYersinia pestis

    Article • FEBS Letters, August 1995, Wiley

    Andrey Karlyshev

  83. Virulent non-capsulate Yersinia pestis variants constructed by insertion mutagenesis

    Article • Journal of Medical Microbiology, April 1995, Society for General Microbiology

    Andrey Karlyshev, Professor Andrey P. Anisimov, Professor Andrey P. Anisimov

  84. Cloning and study of the genetic organization of the exe gene cluster of Aeromonas salmonicida

    Article • Gene, January 1995, Elsevier

    Andrey Karlyshev

  85. Interaction of human interleukin 1-β with Escherichia coli cells transformed by capsular f1 operon Yersinia pestis

    Article • Cytokine, September 1994, Elsevier

    Andrey Karlyshev

  86. Structure and Regulation of a Gene Cluster Involved in Capsule Formation of Y.Pestis

    Article • January 1994, Springer Science + Business Media

    Andrey Karlyshev

  87. Caf1Rgene and its role in the regulation of capsule formation ofY. pestis

    Article • FEBS Letters, June 1992, Wiley

    Andrey Karlyshev

  88. A new gene of the ƒ1 operon of Y. pestis involved in the capsule biogenesis

    Article • FEBS Letters, February 1992, Wiley

    Andrey Karlyshev

  89. Expression of the envelope antigen F1 of Yersinia pestis is mediated by the product of caf1M gene having homology with the chaperone protein PapD of Escherichia coli

    Article • FEBS Letters, July 1991, Wiley

    Andrey Karlyshev

  90. Nucleotide sequence of theYersinia pestisgene encoding F1 antigen and the primary structure of the protein

    Article • FEBS Letters, December 1990, Wiley

    Andrey Karlyshev

  91. Regulation of restriction endonuclease activity with antibiotics

    Article • Advances in Enzyme Regulation, January 1979, Elsevier

    Andrey Karlyshev

  92. Protection of particular cleavage sites of restriction endonucleases by distamycin A and actinomycin D

    Article • Nucleic Acids Research, September 1976, Oxford University Press (OUP)

    Andrey Karlyshev