All Stories

  1. Massive invasion of organellar DNA drives nuclear genome evolution in Toxoplasma
  2. Humoral immunity prevents clinical malaria during Plasmodium relapses without eliminating gametocytes
  3. Is reliance on an inaccurate genome sequence sabotaging your experiments?
  4. A Genetically Tractable, Natural Mouse Model of Cryptosporidiosis Offers Insights into Host Protective Immunity
  5. Distinct amino acid and lipid perturbations characterize acute versus chronic malaria
  6. Evolution of Cryptosporidium
  7. Assembly of highly repetitive genomes using short reads: the genome of discrete typing unit III Trypanosoma cruzi strain 231
  8. FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes
  9. Enrichment of Cryptosporidium parvum from in vitro culture as measured by total RNA and subsequent sequence analysis
  10. EuPathDB: The Eukaryotic Pathogen Genomics Database Resource
  11. Correction to: Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques
  12. Ablation of an Ovarian Tumor Family Deubiquitinase Exposes the Underlying Regulation Governing the Plasticity of Cell Cycle Progression in Toxoplasma gondii
  13. MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments
  14. Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques
  15. PacBio assembly of a Plasmodium knowlesi genome sequence with Hi-C correction and manual annotation of the SICAvar gene family
  16. A Glycosylphosphatidylinositol-Anchored Carbonic Anhydrase-Related Protein of Toxoplasma gondii Is Important for Rhoptry Biogenesis and Virulence
  17. Evolution of the Apicomplexan Sugar Transporter Gene Family Repertoire
  18. EuPathDB: the eukaryotic pathogen genomics database resource
  19. Plasmodium cynomolgi infections in rhesus macaques display clinical and parasitological features pertinent to modelling vivax malaria pathology and relapse infections
  20. High-Quality Genome Assembly and Annotation for Plasmodium coatneyi , Generated Using Single-Molecule Real-Time PacBio Technology
  21. Annotated draft genome sequences of three species ofCryptosporidium:Cryptosporidium meleagridisisolate UKMEL1,C. baileyiisolate TAMU-09Q1 andC. hominisisolates TU502_2012 and UKH1
  22. An unsettling picture emerges from population genomic studies of Plasmodium vivax
  23. An evolutionary approach to identify potentially protective B cell epitopes involved in naturally acquired immunity to malaria and the role of EBA-175 in protection amongst denizens of Bolifamba, Cameroon
  24. The Genome ofHaemoproteus tartakovskyiand Its Relationship to Human Malaria Parasites
  25. Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes
  26. Cryptosporidium hominisgene catalog: a resource for the selection of novelCryptosporidiumvaccine candidates
  27. From genome-scale data to models of infectious disease: A Bayesian network-based strategy to drive model development
  28. Mathematical model of susceptibility, resistance, and resilience in the within-host dynamics between a Plasmodium parasite and the immune system
  29. Neglected Tropical Diseases in the Post-Genomic Era
  30. Systems-Based Analysis of the Sarcocystis neurona Genome Identifies Pathways That Contribute to a Heteroxenous Life Cycle
  31. Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study
  32. Metabolomics in the fight against malaria
  33. TheCryptosporidium parvumApiAP2 gene family: insights into the evolution of apicomplexan AP2 regulatory systems
  34. Standardized Metadata for Human Pathogen/Vector Genomic Sequences
  35. A Survey of Innovation through Duplication in the Reduced Genomes of Twelve Parasites
  36. Real-Time Loop-Mediated Isothermal Amplification (RealAmp) for the Species-Specific Identification of Plasmodium vivax
  37. Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile
  38. Malaria Diagnostics and Surveillance in the Post-Genomic Era
  39. EuPathDB: The Eukaryotic Pathogen database
  40. SchistoDB: an updated genome resource for the three key schistosomes of humans
  41. A 43-Nucleotide U-rich Element in 3′-Untranslated Region of Large Number ofTrypanosoma cruziTranscripts Is Important for mRNA Abundance in Intracellular Amastigotes
  42. A New Single-Step PCR Assay for the Detection of the Zoonotic Malaria Parasite Plasmodium knowlesi
  43. MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
  44. FungiDB: an integrated functional genomics database for fungi
  45. Recombination in Avian Gamma-Coronavirus Infectious Bronchitis Virus
  46. Changes in nonstructural protein 3 are associated with attenuation in avian coronavirus infectious bronchitis virus
  47. Genome cartography: charting the apicomplexan genome
  48. Web Service Composition Using Service Suggestions
  49. The strategies WDK: a graphical search interface and web development kit for functional genomics databases
  50. Attenuated live vaccine usage affects accurate measures of virus diversity and mutation rates in avian coronavirus infectious bronchitis virus
  51. Applied Genomics: Data Mining Reveals Species-Specific Malaria Diagnostic Targets More Sensitive than 18S rRNA
  52. Jumbled Genomes: Missing Apicomplexan Synteny
  53. AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
  54. Emergence of a group 3 coronavirus through recombination
  55. The Alveolate Perkinsus marinus: Biological Insights from EST Gene Discovery
  56. EuPathDB: a portal to eukaryotic pathogen databases
  57. TriTrypDB: a functional genomic resource for the Trypanosomatidae
  58. Web site evolution: Usability evaluation using Time Series Analysis of Selected Episode Graphs
  59. Adapting the Galaxy Bioinformatics Tool to Support Semantic Web Service Composition
  60. GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis
  61. Identification and functional characterization of cis-regulatory elements in the apicomplexan parasite Toxoplasma gondii
  62. PlasmoDB: a functional genomic database for malaria parasites
  63. SchistoDB: a Schistosoma mansoni genome resource
  64. piggyBac is an effective tool for functional analysis of the Plasmodium falciparum genome
  65. The Apicomplexan Whole-Genome Phylogeny: An Analysis of Incongruence among Gene Trees
  66. TcruziKB: Enabling Complex Queries for Genomic Data Exploration
  67. WS-BioZard: A Wizard for Composing Bioinformatics Web Services
  68. Determining the protein repertoire ofCryptosporidium parvum sporozoites
  69. Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria
  70. Genomics
  71. ToxoDB: an integrated Toxoplasma gondii database resource
  72. PlasmoDB v5: new looks, new genomes
  73. Identification of Diverse Archaeal Proteins with Class III Signal Peptides Cleaved by Distinct Archaeal Prepilin Peptidases
  74. ApiDB: integrated resources for the apicomplexan bioinformatics resource center
  75. Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon
  76. SynView: a GBrowse-compatible approach to visualizing comparative genome data
  77. A tale of three genomes: the kinetoplastids have arrived
  78. CryptoDB: a Cryptosporidium bioinformatics resource update
  79. TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi
  80. Genomics meets transgenics in search of the elusive Cryptosporidium drug target
  81. Widespread distribution of antisense transcripts in the Plasmodium falciparum genome
  82. O-glycosylation in Toxoplasma gondii: Identification and analysis of a family of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases
  83. A first glimpse into the pattern and scale of gene transfer in the Apicomplexa
  84. Analysis of the first and second internal transcribed spacer sequences of the ribosomal DNA in Biomphalaria tenagophila complex (Mollusca: Planorbidae)
  85. Gene transfer in the evolution of parasite nucleotide biosynthesis
  86. CryptoDB: the Cryptosporidium genome resource
  87. TcruziDB: an integrated Trypanosoma cruzi genome resource
  88. Gene Discovery in the Apicomplexa as Revealed by EST Sequencing and Assembly of a Comparative Gene Database
  89. Recent Expansion of Toxoplasma Through Enhanced Oral Transmission
  90. PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data
  91. ToxoDB: accessing the Toxoplasma gondii genome
  92. The Plasmodium genome database
  93. A Multiplex-PCR approach to identification of the Brazilian intermediate hosts of Schistosoma mansoni
  94. Adaptation of protein secretion to extremely high-salt conditions by extensive use of the twin-arginine translocation pathway
  95. MOLECULAR PHYLOGENETIC ANALYSIS OF THE AVIAN MALARIAL PARASITE PLASMODIUM (NOVYELLA) JUXTANUCLEARE
  96. Mining the Plasmodium genome database to define organellar function: what does the apicoplast do?
  97. PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished)
  98. Chloroplast transit peptide prediction: a peek inside the black box
  99. Parasite genomics: current status and future prospects
  100. A survey of the Leishmania major Friedlin strain V1 genome by shotgun sequencing: a resource for DNA microarrays and expression profiling
  101. Nuclear-Encoded, Plastid-Targeted Genes Suggest a Single Common Origin for Apicomplexan and Dinoflagellate Plastids
  102. Phylogenetic relationships among Brazilian Biomphalaria species (Mollusca: Planorbidae) based upon analysis of ribosomal ITS2 sequences
  103. AVP2, a Sequence-Divergent, K+-Insensitive H+-Translocating Inorganic Pyrophosphatase from Arabidopsis
  104. The Targets of the Lytic Antibody Response against Trypanosoma cruzi
  105. Origin, targeting, and function of the apicomplexan plastid
  106. Evolutionary changes in sites and timing of actin gene expression in embryos of the direct- and indirect-developing sea urchins, Heliocidaris erythrogramma and H. tuberculata
  107. Plasmodium inui Is Not Closely Related to Other Quartan Plasmodium Species
  108. Phylogenetic analysis of haemosporinid parasites (apicomplexa: Haemosporina) and their coevolution with vectors and intermediate hosts
  109. Regulation and trafficking of three distinct 18 S ribosomal RNAs during development of the malaria parasite
  110. Rapid evolution in a conserved gene family. Evolution of the actin gene family in the sea urchin genus Heliocidaris and related genera
  111. Addressing the gender gap in evolutionary biology
  112. Comparison of circumsporozoite proteins from avian and mammalian malarias: biological and phylogenetic implications.
  113. Sea urchin Hox genes: insights into the ancestral Hox cluster
  114. Structure and evolution of CyI cytoplasmic actin-encoding genes in the indirect- and direct-developing sea urchins Heliocidaris tuberculata and Heliocidaris erythrogramma
  115. In vitro susceptibility studies of vancomycin-resistant Enterococcus faecalis.
  116. Proteomic and genomic approaches to understanding the 'power plant' of Cryptosporidium.
  117. Toxoplasma gondii: A Model for Evolutionary Genomics and Chemotherapy