All Stories

  1. Revealing persistent childhood viruses in the body and organs of adults
  2. Herpesviruses, polyomaviruses, parvoviruses, papillomaviruses, and anelloviruses in vestibular schwannoma
  3. Detection of Low-Copy Human Virus DNA upon Prolonged Formalin Fixation
  4. Studying the Complexity Landscape of Viruses
  5. Identifying Archaea using Compression and Genomic Sequences
  6. The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
  7. Revisiting the Neurospora crassa mitochondrial genome
  8. Automating Artistic Painting Analysis with Information-Based Measures
  9. AC2: An Efficient Protein Sequence Compression Tool Using Artificial Neural Networks and Cache-Hash Models
  10. The Human Bone Marrow Is Host to the DNAs of Several Viruses
  11. A semi-automatic methodology for analysing distributed and private biobanks
  12. Efficient DNA sequence compression with neural networks
  13. The landscape of persistent human DNA viruses in femoral bone
  14. A hybrid pipeline for reconstruction and analysis of viral genomes at multi-organ level
  15. A new method that shows the presence of short persistent DNA/RNA sequences in SARS-CoV-2
  16. GTO: A toolkit to unify pipelines in genomic and proteomic research
  17. Smash++: an alignment-free and memory-efficient tool to find genomic rearrangements
  18. Uncovering patterns in Turing machine tapes
  19. Enhancing DNA Sequence Compression with a Novel Weighted Model Method
  20. A Probabilistic Method to Find and Visualize Distinct Regions in Protein Sequences
  21. GeCo2: An Optimized Tool for Lossless Compression and Analysis of DNA Sequences
  22. Visualization of Similar Primer and Adapter Sequences in Assembled Archaeal Genomes
  23. AC: A Compression Tool for Amino Acid Sequences
  24. Metagenomic Composition Analysis of an Ancient Sequenced Polar Bear Jawbone from Svalbard
  25. Extended-alphabet finite-context models
  26. Metagenomic composition analysis of sedimentary ancient DNA from the Isle of Wight
  27. A DNA Sequence Corpus for Compression Benchmark
  28. Compression of Amino Acid Sequences
  29. NET-ASAR: A Tool for DNA Sequence Search Based on Data Compression
  30. Cryfa: a secure encryption tool for genomic data
  31. Comparison of Compression-Based Measures with Application to the Evolution of Primate Genomes
  32. An Application of Data Compression Models to Handwritten Digit Classification
  33. Cryfa: A Tool to Compact and Encrypt FASTA Files
  34. On the Approximation of the Kolmogorov Complexity for DNA Sequences
  35. On the Role of Inverted Repeats in DNA Sequence Similarity
  36. Substitutional Tolerant Markov Models for Relative Compression of DNA Sequences
  37. Visualization of Distinct DNA Regions of the Modern Human Relatively to a Neanderthal Genome
  38. A Survey on Data Compression Methods for Biological Sequences
  39. Authorship Attribution Using Relative Compression
  40. Efficient Compression of Genomic Sequences
  41. An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
  42. Three minimal sequences found in Ebola virus genomes and absent from human DNA: Fig. 1.
  43. MAFCO: A Compression Tool for MAF Files
  44. A Conditional Compression Distance that Unveils Insights of the Genomic Evolution
  45. Information Profiles for DNA Pattern Discovery
  46. A New Compressor for Measuring Distances among Images
  47. XS: a FASTQ read simulator
  48. DNA Sequences at a Glance
  49. MFCompress: a compression tool for FASTA and multi-FASTA data
  50. A Compression Model for DNA Multiple Sequence Alignment Blocks
  51. A Genomic Distance for Assembly Comparison Based on Compressed Maximal Exact Matches
  52. Compressing Resequencing Data with GReEn
  53. Compression of Whole Genome Alignments Using a Mixture of Finite-Context Models
  54. Exon: A Web-Based Software Toolkit for DNA Sequence Analysis
  55. On the Detection of Unknown Locally Repeating Patterns in Images
  56. GReEn: a tool for efficient compression of genome resequencing data
  57. Bacteria DNA sequence compression using a mixture of finite-context models
  58. DNA synthetic sequences generation using multiple competing Markov models
  59. Complexity Profiles of DNA Sequences Using Finite-Context Models
  60. Compressing the Human Genome Using Exclusively Markov Models