All Stories

  1. Registration of names of prokaryotic Candidatus taxa in the IJSEM
  2. A Genus Definition for Bacteria and Archaea Based on a Standard Genome Relatedness Index
  3. List of new names and new combinations previously effectively, but not validly, published
  4. A New Genomics-Driven Taxonomy of Bacteria and Archaea: Are We There Yet?
  5. List of new names and new combinations previously effectively, but not validly, published
  6. List of new names and new combinations previously effectively, but not validly, published
  7. Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
  8. List of new names and new combinations previously effectively, but not validly, published
  9. Notification of changes in taxonomic opinion previously published outside the IJSEM
  10. Notification of changes in taxonomic opinion previously published outside the IJSEM
  11. List of new names and new combinations previously effectively, but not validly, published
  12. List of new names and new combinations previously effectively, but not validly, published
  13. Genomic Standards Consortium Projects
  14. List of new names and new combinations previously effectively, but not validly, published
  15. Notification of changes in taxonomic opinion previously published outside the IJSEM
  16. Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
  17. Then and now: a systematic review of the systematics of prokaryotes in the last 80 years
  18. Prokaryotic Super Program Advisory Committee DOE Joint Genome Institute, Walnut Creek, CA, March 27, 2013
  19. Response to Sutcliffe et al.: regarding the International Committee on Systematics of Prokaryotes
  20. Genome sequences published outside of Standards in Genomic Sciences, October - November 2012
  21. Genome sequences published outside of Standards in Genomic Sciences, July - October 2012
  22. Response to Gribaldo and Brochier-Armanet: time for order in microbial systematics
  23. RCN4GSC Workshop Report: Managing Data at the Interface of Biodiversity and (Meta)Genomics, March 2011
  24. Genome sequences published outside of Standards in Genomic Sciences, May-June 2012
  25. The NamesforLife Semantic Index of Phenotypic and Genotypic Data
  26. Biological nomenclature terms for facilitating communication in the naming of organisms
  27. Report of the 13th Genomic Standards Consortium Meeting, Shenzhen, China, March 4–7, 2012.
  28. Genome sequences published outside of Standards in Genomic Sciences, March-April 2012
  29. Genome sequences published outside of Standards in Genomic Sciences, January-March 2012
  30. Taxonomic Abstract for the phylum Fusobacteria Garrity and Holt 2012.
  31. The State of Standards in Genomic Sciences
  32. Genome sequences published outside of Standards in Genomic Sciences, December 2011
  33. Genome sequences published outside of Standards in Genomic Sciences, October – November 2011
  34. Genome sequences of Bacteria and Archaea published outside of Standards in Genomic Sciences, June – September 2011
  35. Genome sequences published outside of Standards in Genomic Sciences, January – June 2011
  36. The Genomic Standards Consortium
  37. Draft BioCode (2011) Principles and Rules regulating the naming of organisms New draft, revised in November 2010
  38. Taxonomic Abstract for the family Incertae sedis 11 Garrity et al. 2007.
  39. Alive and well at 100
  40. Metagenomics: A foundling finds its feet.
  41. NamesforLife Semantic Resolution Services for the Life Sciences
  42. NamesforLife Semantic Resolution Services for the Life Sciences
  43. Recent trends in US patent grants and issues to be considered
  44. Recent trends in US patent grants and issues to be considered
  45. Meeting Report from the Genomic Standards Consortium (GSC) Workshop 8
  46. Exemplar Abstract for Nannocystis exedens aggregans Garrity et al. 2007.
  47. Exemplar Abstract for Anabaena sp. Garrity et al. 2007.
  48. Exemplar Abstract for Anabaena sp. Garrity et al. 2007.
  49. Taxonomic Abstract for the phylum Planctomycetes Garrity and Holt 2001.
  50. Meeting Report: Metagenomics, Metadata and MetaAnalysis (M3) at ISMB 2010
  51. Meeting Report: BioSharing at ISMB 2010
  52. Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9
  53. Meeting Report: Metagenomics, Metadata and Meta-analysis; (M3) Special Interest Group at ISMB 2009
  54. Nomenclature Abstract for Chlorobia Garrity and Holt 2005.
  55. Genome Project Standards in a New Era of Sequencing
  56. Ground Truth
  57. Meeting report for SIGS1: First Conference of the Standards in Genomic Sciences eJournal
  58. Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7
  59. Standards in Genomic Sciences
  60. Studies on Monitoring and Tracking Genetic Resources: An Executive Summary
  61. Nomenclature Abstract for Anabaena sp. Garrity et al. 2007.
  62. Pipelining RDP Data to the "Taxomatic" - Final Report
  63. Final Report PIPELINING RDP DATA TO THE "TAXOMATIC"
  64. Nomenclature Abstract for Deinococci Garrity and Holt 2002.
  65. Nomenclature Abstract for Euryarchaeota Garrity and Holt 2001.
  66. Nomenclature Abstract for Flexibacteraceae Garrity and Holt 2001.
  67. Nomenclature Abstract for Incertae sedis 11 Garrity et al. 2007.
  68. Nomenclature Abstract for Incertae sedis 10 Garrity et al. 2007.
  69. Nomenclature Abstract for Incertae sedis 4 Garrity et al. 2007.
  70. Nomenclature Abstract for Incertae sedis 12 Garrity et al. 2007.
  71. Nomenclature Abstract for Incertae sedis 9 Garrity et al. 2007.
  72. Nomenclature Abstract for Incertae sedis 3 Garrity et al. 2007.
  73. Nomenclature Abstract for Incertae sedis 6 Garrity et al. 2007.
  74. Nomenclature Abstract for Incertae sedis 7 Garrity et al. 2007.
  75. Nomenclature Abstract for Incertae sedis 1 Garrity et al. 2007.
  76. Nomenclature Abstract for Fluoribacter Garrity et al. 1980.
  77. Nomenclature Abstract for Tatlockia Garrity et al. 1980.
  78. Nomenclature Abstract for Nitrospira Garrity and Holt 2001.
  79. Nomenclature Abstract for Archaeoglobi Garrity and Holt 2002.
  80. Nomenclature Abstract for Spirochaetes Garrity and Holt 2001.
  81. Nomenclature Abstract for Streptomyces olivoreticuli cellulophilus Garrity et al. 2007.
  82. Nomenclature Abstract for Nitrospirales Garrity and Holt 2001.
  83. Nomenclature Abstract for Thermodesulfobacteria Garrity and Holt 2001.
  84. Nomenclature Abstract for Xiphinematobacteriaceae Garrity et al. 2002.
  85. Nomenclature Abstract for Nitrosomonas mobilis Garrity et al. 2007.
  86. Nomenclature Abstract for Methanomicrobia Garrity et al. 2003.
  87. Nomenclature Abstract for Methanopyri Garrity and Holt 2002.
  88. Nomenclature Abstract for Methylobacteriaceae Garrity et al. 2006.
  89. Nomenclature Abstract for Nitrospiraceae Garrity and Holt 2001.
  90. Nomenclature Abstract for Thermoanaerobacteriales Garrity and Holt 2001.
  91. Nomenclature Abstract for Coriobacterineae Garrity and Holt 2001.
  92. Nomenclature Abstract for Enterobacteriales Garrity and Holt 2001.
  93. Nomenclature Abstract for Legionellales Garrity et al. 2005.
  94. Nomenclature Abstract for Chrysiogenaceae Garrity and Holt 2002.
  95. Nomenclature Abstract for Chrysiogenetes Garrity and Holt 2002.
  96. Nomenclature Abstract for Chrysiogenales Garrity and Holt 2002.
  97. Nomenclature Abstract for Coxiellaceae Garrity et al. 2005.
  98. Nomenclature Abstract for Caldisphaerales Garrity et al. 2003.
  99. Nomenclature Abstract for Acidimicrobineae Garrity and Holt 2001.
  100. Nomenclature Abstract for Aurantimonadaceae Garrity et al. 2003.
  101. Nomenclature Abstract for Acidithiobacillales Garrity et al. 2005.
  102. Nomenclature Abstract for Acidithiobacillaceae Garrity et al. 2005.
  103. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
  104. Nomenclature Abstract for Hahellaceae Garrity et al. 2005.
  105. Nomenclature Abstract for Thiotrichales Garrity et al. 2005.
  106. Nomenclature Abstract for Pasteurellales Garrity et al. 2005.
  107. Nomenclature Abstract for Oceanospirillales Garrity et al. 2005.
  108. Nomenclature Abstract for Oceanospirillaceae Garrity et al. 2005.
  109. Nomenclature Abstract for Fluoribacter bozemanae Garrity et al. 1980.
  110. Taxonomic Abstract for the class Planctomycetacia Garrity and Holt 2001.
  111. Proposals to clarify how type strains are deposited and made available to the scientific community for the purpose of systematic research
  112. Should we alter the way that authorship of a subspecies name that is automatically created under Rule 40d of the Bacteriological Code is cited?
  113. Foreword to the Special Issue on the Fifth Genomic Standards Consortium Workshop
  114. Toward a Standards-Compliant Genomic and Metagenomic Publication Record
  115. Meeting Report: The Fifth Genomic Standards Consortium (GSC) Workshop
  116. Meeting Report: The Fourth Genomic Standards Consortium (GSC) Workshop
  117. Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
  118. The minimum information about a genome sequence (MIGS) specification
  119. Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
  120. Taxonomic Outline of the Bacteria and Archaea
  121. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
  122. eGenomics: Cataloguing Our Complete Genome Collection III
  123. Computational aspects of systematic biology
  124. Self-organizing and self-correcting classifications of biological data
  125. Oceanospirillales ord. nov.
  126. Pseudomonadales Orla-Jensen 1921, 270AL
  127. Legionellales ord. nov.
  128. Pasteurellales ord. nov.
  129. Cardiobacteriales ord. nov.
  130. Thiotrichales ord. nov.
  131. Acidithiobacillales ord. nov.
  132. Bergey’s Manual® of Systematic Bacteriology
  133. The Revised Road Map to the Manual
  134. Bergey’s Manual® of Systematic Bacteriology
  135. On Using the Manual
  136. Class II. Betaproteobacteria class. nov.
  137. Class I. Alphaproteobacteria class. nov.
  138. Class V. Epsilonproteobacteria class. nov.
  139. Class V. Epsilonproteobacteria class. nov.
  140. Class I. Alphaproteobacteria class. nov.
  141. Class II. Betaproteobacteria class. nov.
  142. Nomenclature and taxonomy of the genus Salmonella
  143. eGenomics: Cataloguing our Complete Genome Collection
  144. The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
  145. Exploring prokaryotic taxonomy
  146. The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
  147. Future-Proofing Biological Nomenclature
  148. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology
  149. Phylum BIX. Deferribacteres phy. nov.
  150. Bergey’s Manual® of Systematic Bacteriology
  151. On Using the Manual
  152. Phylum BVI. Chloroflexi phy. nov.
  153. Phylum BV. Chrysiogenetes phy. nov.
  154. Phylum BIV. “Deinococcus-Thermus”
  155. Phylum BIII. Thermodesulfobacteria phy. nov.
  156. Phylum All. Euryarchaeota phy. nov.
  157. Phylum BXI. Chlorobi phy. nov.
  158. Phylum Al. Crenarchaeota phy. nov.
  159. The Road Map to the Manual
  160. Phylum BVIII. Nitrospirae phy. nov.
  161. Phylum BVII. Thermomicrobia phy. nov.
  162. Bioprospecting in the developing world
  163. A new version of the RDP (Ribosomal Database Project)
  164. Quinoxapeptins: Novel Chromodepsipeptide Inhibitors of HIV-1 and HIV-2 Reverse Transcriptase. I. The Producing Organism and Biological Activity.
  165. Actinoplanic acids A and B as novel inhibitors of farnesyl-protein transferase
  166. Genetic relationships among actinomycetes that produce the immunosuppressant macrolides FK506, FK520/FK523 and rapamycin
  167. Cochinmicins, novel and potent cyclodepsipeptide endothelin antagonists from a Microbispora sp. I. Production, isolation, and characterization.
  168. Sphingofungins A,B,C, and d; a new family of antifungal agents. I. Fermentation, isolation, and biological activity.
  169. HIV-1 protease inhibitory activity of L-694,746, a novel metabolite of L-689,502
  170. L-687, 781, a new member of the papulacandin family of .BETA.-1,3-d-glucan synthesis inhibitors. I. Fermentation, isolation, and biological activity.
  171. Novel and potent gastrin and brain cholecystokinin antagonists from Streptomyces olivaceus. Taxonomy, fermentation, isolation, chemical conversions, and physico-chemical and biochemical properties.
  172. L-681,572-a new antifungal agent. Isolation, characterization, and biological activity.
  173. Mode Of Action of L-660,631 in Candida albicans
  174. Mode of Action of ?-Lactone 1233A in Candida albicans
  175. L-657,398, a novel antifungal agent: Fermentation, isolation, structural elucidation and biological properties.
  176. Lysosomotropic agents. 7. Broad-spectrum antifungal activity of lysosomotropic detergents
  177. Genetic and Phenotypic Relationships among the Micromonospora
  178. Detergent induced inhibition of eukaryotic RNA polymerase B activity and amanitin binding
  179. Detection and quantitation of amanitin using an RNA-polymerase competition binding assay
  180. GSC 11: George Garrity
  181. George Garrity on SIGS at GSC8