All Stories

  1. Introduction to the special issue on Ptychography: software and technical developments

    Article • Journal of Applied Crystallography, March 2021, International Union of Crystallography

    Filipe RNC Maia

  2. Rayleigh-scattering microscopy for tracking and sizing nanoparticles in focused aerosol beams

    Article • IUCrJ, September 2018, International Union of Crystallography

    Filipe RNC Maia

  3. Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging

    Article • IUCrJ, September 2018, International Union of Crystallography

    Filipe RNC Maia

  4. CCP-FEL: a collection of computer programs for free-electron laser research

    Article • Journal of Applied Crystallography, August 2016, International Union of Crystallography

    Filipe RNC Maia

  5. The trickle before the torrent—diffraction data from X-ray lasers

    Article • Scientific Data, August 2016, Nature

    Filipe RNC Maia

  6. A data set from flash X-ray imaging of carboxysomes

    Article • Scientific Data, August 2016, Nature

    Filipe RNC Maia

  7. Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser

    Article • Scientific Data, August 2016, Nature

    Filipe RNC Maia

  8. Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source

    Article • Scientific Data, August 2016, Nature

    Filipe RNC Maia, Dr Benedikt J Daurer, Dr Kartik Ayyer

  9. Open data set of live cyanobacterial cells imaged using an X-ray laser

    Article • Scientific Data, August 2016, Nature

    Filipe RNC Maia

  10. SHARP: a distributed GPU-based ptychographic solver

    Article • Journal of Applied Crystallography, July 2016, International Union of Crystallography

    Dr Benedikt J Daurer, Filipe RNC Maia

  11. Condor: a simulation tool for flash X-ray imaging

    Article • Journal of Applied Crystallography, July 2016, International Union of Crystallography

    Filipe RNC Maia

  12. Real-time analysis for X-ray diffraction

    Article • Journal of Applied Crystallography, April 2016, International Union of Crystallography

    Dr Benedikt J Daurer, Filipe RNC Maia

  13. Real-time data-intensive computing

    Article • January 2016, American Institute of Physics

    Filipe RNC Maia, Dr Benedikt J Daurer

  14. CAMERA: The Center for Advanced Mathematics for Energy Research Applications

    Article • Synchrotron Radiation News, March 2015, Taylor & Francis

    Filipe RNC Maia

  15. Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser

    Article • Physical Review Letters, March 2015, American Physical Society (APS)

    Filipe RNC Maia

  16. Imaging single cells in a beam of live cyanobacteria with an X-ray laser

    Article • Nature Communications, February 2015, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  17. High-throughput imaging of heterogeneous cell organelles with an X-ray laser

    Article • Nature Reports Climate Change, November 2014, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  18. Explosion dynamics of sucrose nanospheres monitored by time of flight spectrometry and coherent diffractive imaging at the split-and-delay beam line of the FLASH soft X-ray laser

    Article • Optics Express, November 2014, Optical Society of America (OSA)

    Filipe RNC Maia, Professor Henry N Chapman

  19. Chemical composition mapping with nanometre resolution by soft X-ray microscopy

    Article • Nature Reports Climate Change, September 2014, Nature

    Filipe RNC Maia

  20. Shapes and vorticities of superfluid helium nanodroplets

    Article • Science, August 2014, American Association for the Advancement of Science

    Filipe RNC Maia

  21. Cheetah: software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data

    Article • Journal of Applied Crystallography, May 2014, International Union of Crystallography

    Filipe RNC Maia, Professor Henry N Chapman

  22. Toward unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron lasers

    Article • Optics Express, November 2013, Optical Society of America (OSA)

    Filipe RNC Maia, Professor Henry N Chapman

  23. Augmented projections for ptychographic imaging

    Article • Inverse Problems, October 2013, Institute of Physics Publishing

    Filipe RNC Maia

  24. Mesoscale morphology of airborne core–shell nanoparticle clusters: x-ray laser coherent diffraction imaging

    Article • Journal of Physics B Atomic Molecular and Optical Physics, August 2013, Institute of Physics Publishing

    Filipe RNC Maia, Professor Henry N Chapman

  25. The extraction of single-particle diffraction patterns from a multiple-particle diffraction pattern

    Article • Optics Express, June 2013, Optical Society of America (OSA)

    Filipe RNC Maia, Professor Henry N Chapman

  26. Sensing the wavefront of x-ray free-electron lasers using aerosol spheres

    Article • Optics Express, May 2013, Optical Society of America (OSA)

    Filipe RNC Maia, Professor Henry N Chapman

  27. Impact of wave front and coherence optimization in coherent diffractive imaging

    Article • Optics Express, May 2013, Optical Society of America (OSA)

    Filipe RNC Maia

  28. Profiling structured beams using injected aerosols

    Article • October 2012, SPIE

    Filipe RNC Maia

  29. The Coherent X-ray Imaging Data Bank

    Article • Nature Methods, August 2012, Nature

    Filipe RNC Maia

  30. Erratum: Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight

    Article • Nature, August 2012, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  31. Noise-robust coherent diffractive imaging with a single diffraction pattern

    Article • Optics Express, July 2012, Optical Society of America (OSA)

    Filipe RNC Maia

  32. Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight

    Article • Nature, June 2012, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  33. Femtosecond free-electron laser x-ray diffraction data sets for algorithm development

    Article • Optics Express, February 2012, Optical Society of America (OSA)

    Dr Max J Cryle, Filipe RNC Maia

  34. Lipidic phase membrane protein serial femtosecond crystallography

    Article • Nature Methods, January 2012, Nature

    Filipe RNC Maia, Professor Gergely Katona, Professor Henry N Chapman

  35. In vivo protein crystallization opens new routes in structural biology

    Article • Nature Methods, January 2012, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  36. Time-resolved protein nanocrystallography using an X-ray free-electron laser

    Article • Optics Express, January 2012, Optical Society of America (OSA)

    Filipe RNC Maia

  37. Radiation damage in protein serial femtosecond crystallography using an x-ray free-electron laser

    Article • Physical Review B, December 2011, American Physical Society (APS)

    Filipe RNC Maia, Professor Henry N Chapman

  38. Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements

    Article • Nature Reports Climate Change, December 2011, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  39. Iterative Krylov solution methods for geophysical electromagnetic simulations on throughput-oriented processing units

    Article • The International Journal of High Performance Computing Applications, November 2011, SAGE Publications

    Filipe RNC Maia

  40. Unsupervised classification of single-particle X-ray diffraction snapshots by spectral clustering

    Article • Optics Express, August 2011, Optical Society of America (OSA)

    Filipe RNC Maia

  41. Compressive auto-indexing in femtosecond nanocrystallography

    Article • Ultramicroscopy, June 2011, Elsevier

    Filipe RNC Maia

  42. Iterative Krylov Solution Methods for Geophysical Electromagnetic Simulations on Throughput-oriented Graphical Processing Units

    Article • May 2011, EAGE Publications

    Filipe RNC Maia

  43. Single particle imaging with soft x-rays at the Linac Coherent Light Source

    Article • May 2011, SPIE

    Filipe RNC Maia

  44. Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals

    Article • Acta Crystallographica Section A Foundations of Crystallography, February 2011, International Union of Crystallography

    Filipe RNC Maia, Professor Henry N Chapman

  45. Single mimivirus particles intercepted and imaged with an X-ray laser

    Article • Nature, February 2011, Springer Science + Business Media

    Professor Jean-Michel Claverie, Filipe RNC Maia, Professor Henry N Chapman

  46. Femtosecond X-ray protein nanocrystallography

    Article • Nature, February 2011, Springer Science + Business Media

    Filipe RNC Maia, Professor Henry N Chapman

  47. On the Feasibility of Nanocrystal Imaging Using Intense and Ultrashort X-ray Pulses

    Article • ACS Nano, January 2011, American Chemical Society (ACS)

    Filipe RNC Maia, Professor Henry N Chapman

  48. Hawk: the image reconstruction package for coherent X-ray diffractive imaging

    Article • Journal of Applied Crystallography, October 2010, International Union of Crystallography

    Filipe RNC Maia

  49. Femtosecond diffractive imaging of biological cells

    Article • Journal of Physics B Atomic Molecular and Optical Physics, September 2010, Institute of Physics Publishing

    Filipe RNC Maia, Professor Henry N Chapman

  50. Compressive phase contrast tomography

    Article • August 2010, SPIE

    Filipe RNC Maia

  51. Publisher’s Note: Cryptotomography: Reconstructing 3D Fourier Intensities from Randomly Oriented Single-Shot Diffraction Patterns [Phys. Rev. Lett. 104 , 225501 (2010)]

    Article • Physical Review Letters, June 2010, American Physical Society (APS)

    Filipe RNC Maia, Professor Henry N Chapman

  52. Cryptotomography: Reconstructing 3D Fourier Intensities from Randomly Oriented Single-Shot Diffraction Patterns

    Article • Physical Review Letters, June 2010, American Physical Society (APS)

    Filipe RNC Maia, Professor Henry N Chapman

  53. Structural variability and the incoherent addition of scattered intensities in single-particle diffraction

    Article • Physical Review E, September 2009, American Physical Society (APS)

    Filipe RNC Maia

  54. Single-Shot Diffractive Imaging with a Table-Top Femtosecond Soft X-Ray Laser-Harmonics Source

    Article • Physical Review Letters, July 2009, American Physical Society (APS)

    Filipe RNC Maia

  55. Femtosecond Dynamic Diffraction Imaging with Free Electron Lasers: X-Ray Snapshots of Ultra-Fast Nanoscale Phenomena

    Article • January 2009, Optical Society of America (OSA)

    Filipe RNC Maia

  56. Feasibility of imaging living cells at subnanometer resolutions by ultrafast X-ray diffraction

    Article • Quarterly Reviews of Biophysics, November 2008, Cambridge University Press

    Filipe RNC Maia

  57. X-Ray optics: Clarity through a keyhole

    Article • Nature Physics, May 2008, Nature

    Filipe RNC Maia

  58. Structural studies of melting on the picosecond time scale

    Article • Physical Chemistry Chemical Physics, January 2008, Royal Society of Chemistry

    Filipe RNC Maia

  59. Single Particle X-ray Diffractive Imaging

    Article • Nano Letters, January 2008, American Chemical Society (ACS)

    Filipe RNC Maia, Professor Henry N Chapman

  60. Femtosecond diffractive imaging with a soft-X-ray free-electron laser

    Article • Nature Physics, November 2006, Nature

    Filipe RNC Maia, Professor Henry N Chapman

  61. The binding of xanthone derivatives to transthyretin

    Article • Biochemical Pharmacology, December 2005, Elsevier

    Dr Luis Gales, Filipe RNC Maia

  62. Interactive visualization of electron density slices

    Article • Journal of Applied Crystallography, May 2005, International Union of Crystallography

    Filipe RNC Maia

  63. New designs for inhibitors of the NF-κB: DNA binding

    Article • Theoretical Chemistry Accounts, March 2005, Springer Science + Business Media

    Dr Tiago Barros, Filipe RNC Maia

  64. Design of 2-cyclopentenone derivatives with enhanced NF-κB: DNA binding inhibitory properties

    Article • Journal of Molecular Structure THEOCHEM, October 2004, Elsevier

    Dr Tiago Barros, Filipe RNC Maia