All Stories

  1. Insertion sequence elements associated with Staphylococcus epidermidis evolution in persistent orthopaedic device-related infections
  2. Recent emergence of a multidrug-resistant Campylobacter coli lineage linked to poultry intensification in the Peruvian Amazon
  3. A stable, hierarchical LIN code system for Campylobacter jejuni and Campylobacter coli: A unified genomic nomenclature for lineage-level typing and global surveillance
  4. Phenotypic Resistance of Ciprofloxacin and Azithromycin Resistant Campylobacter Isolates to an Extended Panel of Antibiotics
  5. Robust Performance of Culture, qPCR, and Genomic Approaches for Shigella Serotyping in a Pediatric Surveillance Cohort
  6. American black bear (Ursus americanus) as a potential host for Campylobacter jejuni
  7. Growth rates and metabolic traits differ by diarrhoeal manifestation in Campylobacter jejuni strains
  8. GETCampy Sequencing protocols v1
  9. Biotype Determines Survival of Yersinia enterocolitica in Red Blood Cell Concentrates
  10. Growth rates and Metabolic Traits DifferentiateCampylobacter jejuniStrains by Diarrheal Manifestation
  11. STRAIN-SPECIFIC VIRULENCE SIGNATURES OFCAMPYLOBACTER JEJUNIASSOCIATED WITH WATERY VERSUS BLOODY DIARRHEA IN THE NEONATAL PIGLET MODEL
  12. Methicillin-sensitive Staphylococcus aureus lineages contribute towards poor patient outcomes in orthopaedic device-related infections
  13. American black bear (Ursus americanus) as a potential host forCampylobacter jejuni
  14. Characterization of antibiotic determinants and heavy metal resistance genes in Escherichia coli from pigs in Catalonia
  15. Machine learning to attribute the source of Campylobacter infections in the United States: A retrospective analysis of national surveillance data
  16. The epidemiology and impact of persistent Campylobacter infections on childhood growth among children 0–24 months of age in resource-limited settings
  17. Assessing antimicrobial resistance profiles of Salmonella enterica in the pork production system
  18. Global Variation in Escherichia coli mcr-1 Genes and Plasmids from Animal and Human Genomes Following Colistin Usage Restrictions in Livestock
  19. Geographical distribution, disease association and diversity of Klebsiella pneumoniae K/L and O antigens in India: roadmap for vaccine development
  20. Genomic tailoring of autogenous poultry vaccines to reduce Campylobacter from farm to fork
  21. GetCampy_Laboratory Procedures v1
  22. Epistasis, core-genome disharmony, and adaptation in recombining bacteria
  23. Psychometric evaluation of the near activity visual questionnaire presbyopia (NAVQ-P) and additional patient-reported outcome items
  24. Novel rpsK / rpsD primer-probe assay improves detection of Campylobacter jejuni and Campylobacter coli in human stool
  25. Commercial farmed swine harbour a variety of pathogenic bacteria and antimicrobial resistance genes
  26. Genomic resistant determinants of multidrug resistant Campylobacter spp. isolates in Peru
  27. Recombination-mediated dissemination of Methicillin-resistant S. aureus clonal complex 1 in the Egyptian health care settings
  28. The Helicobacter pylori Genome Project: insights into H. pylori population structure from analysis of a worldwide collection of complete genomes
  29. C-SOP-1001: High Molecular Weight DNA (HMW DNA) Extraction from Bacteria using NEB Monarch HMW DNA extraction kit v1
  30. Genomic tailoring of autogenous poultry vaccines to reduceCampylobacterfrom farm to fork
  31. C-SOP-201: Genomic DNA Quantification using a Qubit Fluorometer v1
  32. Evidence of potential Campylobacter jejuni zooanthroponosis in captive macaque populations
  33. Contrasting genes conferring short- and long-term biofilm adaptation in Listeria
  34. Urbanization spreads antimicrobial resistant enteric pathogens in wild bird microbiomes
  35. Investigation of swine caecal microbiomes in the northern region of Thailand
  36. Oral and gut microbial biomarkers of susceptibility to respiratory tract infection in adults: A feasibility study
  37. Contrasting genes conferring short and long-term biofilm adaptation inListeria
  38. Prevalence and Antimicrobial-Resistant Patterns of Non-typhoidal Salmonella in Good Agricultural Practice Certified Broiler Farms and Poultry Slaughterhouses in an Intensive Farming Area in Upper Northern Part of Thailand
  39. Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations
  40. Colistin resistance and resistance determinants are mobile amongSalmonella entericaisolates from diseased and healthy pigs in Thailand
  41. Machine Learning the Source Campylobacter Infection in the United States of America
  42. Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations
  43. Genetic diversity and variation in antimicrobial-resistance determinants of non-serotype 2 Streptococcus suis isolates from healthy pigs
  44. Multiple hypervirulent methicillin-sensitiveStaphylococcus aureuslineages contribute towards poor patient outcomes in orthopedic device-related infections
  45. Spatiotemporal Investigation of Antibiotic Resistance in the Urban Water Cycle Influenced by Environmental and Anthropogenic Activity
  46. Genome-based analysis of infrequent Salmonella serotypes through the Thai pork production chain
  47. Assessing the pathogenic potential of less common Salmonella enterica serotypes circulating in the Thai pork production chain
  48. Local accessory gene sharing among Egyptian Campylobacter potentially promotes the spread of antimicrobial resistance
  49. Stereoselective metabolism of chloramphenicol by bacteria isolated from wastewater, and the importance of stereochemistry in environmental risk assessments for antibiotics
  50. Signatures of selection in core and accessory genomes indicate different ecological drivers of diversification among Bacillus cereus clades
  51. Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter
  52. Identification of Streptococcus suis carriage in healthy pigs in Chiang Mai, Thailand
  53. Oral and gut microbiome biomarkers of susceptibility to respiratory tract infection in adults: a longitudinal cohort feasibility study
  54. Characterisation of Salmonella enterica clones carrying mcr-1 plasmids in meat products and patients in Northern Thailand using long read sequencing
  55. High-resolution sweep metagenomics using fast probabilistic inference
  56. Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages
  57. Local accessory gene sharing drives lineage-specific acquisition of antimicrobial resistance in Egyptian Campylobacter spp.
  58. Campylobacter jejuni genotypes are associated with post-infection irritable bowel syndrome in humans
  59. Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter
  60. Genome-wide association study of signature genetic alterations among pseudomonas aeruginosa cystic fibrosis isolates
  61. Non-serotype 2 isolates from healthy pigs are a potential zoonotic reservoir of Streptococcus suis genetic diversity and antimicrobial resistance
  62. Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations
  63. Molecular evidence for cross boundary spread of Salmonella spp. in meat sold at retail markets in the middle Mekong basin area
  64. Stereoselective Bacterial Metabolism of Antibiotics in Environmental Bacteria – A Novel Biochemical Workflow
  65. Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli
  66. Cross-species evolutionary rewiring in the enteric bacteriumCampylobacter
  67. Genome evolution and the emergence of pathogenicity in avian Escherichia coli
  68. Antimicrobial resistantSalmonellaspp. circulating in antibiotic-free organic pig farms of northern-Thailand
  69. Multiple clones of colistin-resistant Salmonella enterica carrying mcr-1 plasmids in meat products and patients in Northern Thailand
  70. Quantifying bacterial evolution in the wild: a birthday problem for Campylobacter lineages
  71. Stress-resistance associated with multi-host transmission and enhanced biofilm formation at 42 °C among hyper-aerotolerant generalist Campylobacter jejuni
  72. Genome-wide identification of host-segregating SNPs for source attribution of clinical Campylobacter coli isolates
  73. A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas
  74. Whole-genome characterisation of multidrug resistant monophasic variants of Salmonella Typhimurium from pig production in Thailand
  75. Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon
  76. Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni
  77. Genomic epidemiology of Campylobacter jejuni associated with asymptomatic paediatric infection in the Peruvian Amazon
  78. Hydrocarbon seepage in the deep seabed links subsurface and seafloor biospheres
  79. The emergence of plasmid-borne cfr-mediated linezolid resistant-staphylococci in Vietnam
  80. High-resolution sweep metagenomics using fast probabilistic inference
  81. Genetic diversity of composite enterotoxigenic Staphylococcus epidermidis pathogenicity islands
  82. Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease
  83. Domestication of Campylobacter jejuni NCTC 11168
  84. Hermes: an ensemble machine learning architecture for protein secondary structure prediction
  85. Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain
  86. Domestication of Campylobacter jejuni NCTC 11168
  87. DNA extraction: Campylobacter v1
  88. Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in veterinary hospital staff and students
  89. Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis
  90. Genomic epidemiology of clinical Campylobacter spp. at a single health trust site
  91. A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk
  92. Genomic epidemiology of the commercially important pathogen Renibacterium salmoninarum within the Chilean salmon industry
  93. Epistasis analysis uncovers hidden antibiotic resistance-associated fitness costs hampering the evolution of MRSA
  94. High Resolution Whole Genome Multilocus Sequence Typing (wgMLST) Schemes for Salmonella enterica Weltevreden Epidemiologic Investigations
  95. High-resolution sweep metagenomics using ultrafast read mapping and inference
  96. The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species
  97. Lineage-specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group
  98. Convergent amino acid signatures in polyphyletic Campylobacter jejuni sub-populations suggest human niche tropism
  99. Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease
  100. Comparative genomic survey of Bacillus cereus sensu stricto isolates from the dairy production chain in Brazil
  101. Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes
  102. Comparative Genomics Study of Staphylococcus epidermidis Isolates from Orthopedic-Device-Related Infections Correlated with Patient Outcome
  103. Local genes for local bacteria: Evidence of allopatry in the genomes of transatlanticCampylobacterpopulations
  104. Hidden antibiotic resistance fitness costs revealed by GWAS-based epistasis analysis
  105. Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations
  106. Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations
  107. Recombination-mediated host-adaptation by avian Staphylococcus aureus
  108. Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins
  109. Genome-Wide Identification of Host-Segregating Epidemiological Markers for Source Attribution in Campylobacter jejuni
  110. Genome‐wide association of functional traits linked with C ampylobacter jejuni survival from farm to fork
  111. Local genes for local bacteria: evidence of allopatry in the genomes of transatlantic Campylobacter populations
  112. Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations
  113. Bayesian identification of bacterial strains from sequencing data
  114. Large Sequence Diversity within the Biosynthesis Locus and Common Biochemical Features of Campylobacter coli Lipooligosaccharides
  115. Genetic features of livestock-associated Staphylococcus aureus ST9 isolates from Chinese pigs that carry the lsa(E) gene for quinupristin/dalfopristin resistance
  116. Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork
  117. Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork
  118. From Escherich to the Escherichia coli genome
  119. Genetic and chemical differentiation of Campylobacter coli and Campylobacter jejuni lipooligosaccharide pathways
  120. Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples
  121. Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples
  122. Draft Genome Sequence of an Enterobacter Species Associated with Illnesses and Powdered Infant Formula
  123. Enhanced biofilm formation and multi-host transmission evolve from divergent genetic backgrounds inCampylobacter jejuni
  124. Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections
  125. Persistent Staphylococcus aureus Isolates from Two Independent Cases of Bacteremia Display Increased Bacterial Fitness and Novel Immune Evasion Phenotypes
  126. Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis
  127. Evidence of land-sea transfer of the zoonotic pathogenCampylobacterto a wildlife marine sentinel species
  128. A Reference Pan-Genome Approach to Comparative Bacterial Genomics: Identification of Novel Epidemiological Markers in Pathogenic Campylobacter
  129. Dormant Cells of Staphylococcus aureus Are Resuscitated by Spent Culture Supernatant
  130. Progressive genome‐wide introgression in agriculturalCampylobacter coli
  131. Staphylococcus epidermidis in Biomaterial-Associated Infections
  132. The Zinc-Responsive Regulator Zur Controls Expression of the Coelibactin Gene Cluster in Streptomyces coelicolor
  133. Zinc-Responsive Regulation of Alternative Ribosomal Protein Genes in Streptomyces coelicolor Involves Zur and σR