All Stories

  1. DNA Distortion by the Burkholderia thailandensis Transcriptional Regulator FusR2 Is Abolished by Fusaric Acid Binding
  2. CysB in the Multiverse of Functions: Regulatory Roles in Cysteine Biosynthesis and Beyond
  3. The Agrobacterium fabrum efflux pump PecM is produced in response to the plant exudate 4-hydroxybenzaldehyde to avoid disruption of central metabolism
  4. Transcriptome-Proteome Profiling in Burkholderia thailandensis during the Transition from Exponential to Stationary Phase
  5. The delicate balance of bacterial purine homeostasis
  6. Regulation of bacterial virulence genes by PecS family transcription factors
  7. Yeast Crf1p is an activator with different roles in regulation of target genes
  8. Targeting bacterial transcription factors for infection control: opportunities and challenges
  9. Transcription Factor PecS Mediates Agrobacterium fabrum Fitness and Survival
  10. The Global Regulator MftR Controls Virulence and Siderophore Production in Burkholderia thailandensis
  11. Identification of a MarR Subfamily That Regulates Arsenic Resistance Genes
  12. Identification of a MarR subfamily that regulates arsenic resistance genes
  13. Transcriptome RNA Sequencing Data Set of Differential Gene Expression in Escherichia coli BW25113 Wild-Type and slyA Mutant Strains
  14. Similar solutions to a common challenge: regulation of genes encoding Ralstonia solanacearum xanthine dehydrogenase
  15. Impaired purine homeostasis plays a primary role in trimethoprim‐mediated induction of virulence genes in Burkholderia thailandensis
  16. Do Global Regulators Hold the Key to Production of Bacterial Secondary Metabolites?
  17. The Link between Purine Metabolism and Production of Antibiotics in Streptomyces
  18. Redox Sensing by PecS from the Plant Pathogen Pectobacterium atrosepticum and Its Effect on Gene Expression and the Conformation of PecS-Bound Promoter DNA
  19. A role for Vibrio vulnificus PecS during hypoxia
  20. An EmrB multidrug efflux pump in Burkholderia thailandensis with unexpected roles in antibiotic resistance
  21. MarR Family Transcription Factors from Burkholderia Species: Hidden Clues to Control of Virulence-Associated Genes
  22. Gene Regulation by Redox-Sensitive Burkholderia thailandensis OhrR and Its Role in Bacterial Killing of Caenorhabditis elegans
  23. Correction to Global Awakening of Cryptic Biosynthetic Gene Clusters in Burkholderia thailandensis
  24. Global Awakening of Cryptic Biosynthetic Gene Clusters in Burkholderia thailandensis
  25. Linking starvation and synthesis of a signaling molecule that promotes survival during starvation
  26. Cationic ionic liquid surfactant-polyacrylamide gel electrophoresis for enhanced separation of acidic and basic proteins with single-step ribonuclease b glycoforms separation
  27. Expression of protein-coding genes by a kinase that binds directly to the genes
  28. DNA damage regulates direct association of TOR kinase with the RNA polymerase II–transcribed HMO1 gene
  29. The different ways in which MarR proteins control gene expression
  30. Control of DNA end resection by yeast Hmo1p affects efficiency of DNA end-joining
  31. A transcription factor that represses genes involved in biofilm formation
  32. How bacteria optimize metabolism
  33. Yeast HMO1: Linker Histone Reinvented
  34. How pH changes cause a transcription factor to alter promoter DNA topology
  35. Stabilization of yeast chromatin by an HMGB protein
  36. Purine salvage is required for (p)ppGpp synthesis
  37. Histidine switch controlling pH-dependent protein folding and DNA binding in a transcription factor at the core of synthetic network devices
  38. How to do DNaseI footprinting
  39. Yeast high mobility group protein HMO1 stabilizes chromatin and is evicted during repair of DNA double strand breaks
  40. The regulatory role of Streptomyces coelicolor TamR in central metabolism
  41. KU binds excess zinc to prevent toxicity
  42. Determining the Role of Metal Binding in Protein Cage Assembly
  43. Ligand-Binding Pocket Bridges DNA-Binding and Dimerization Domains of the Urate-Responsive MarR Homologue MftR from Burkholderia thailandensis
  44. Mycobacterium smegmatis Ku binds DNA without free ends
  45. Role of HMGB Proteins in Coordinating Ribosomal Protein and Ribosomal RNA
  46. Streptomyces coelicolor Encodes a Urate-Responsive Transcriptional Regulator with Homology to PecS from Plant Pathogens
  47. The transcriptional regulator TamR fromStreptomyces coelicolorcontrols a key step in central metabolism during oxidative stress
  48. MarR family transcription factors
  49. C-terminal low-complexity sequence repeats of Mycobacterium smegmatis Ku modulate DNA binding
  50. Functional comparison of Deinococcus radiodurans Dps proteins suggests distinct in vivo roles
  51. Metal Binding at the Deinococcus radiodurans Dps-1 N-Terminal Metal Site Controls Dodecameric Assembly and DNA Binding
  52. Interaction of Saccharomyces cerevisiae HMO2 Domains with Distorted DNA
  53. Expression of yeast high mobility group protein HMO1 is regulated by TOR signaling
  54. On the stoichiometry of Deinococcus radiodurans Dps-1 binding to duplex DNA
  55. What characterizes the subset of MarR family transcription factors that bind urate
  56. Urate Is a Ligand for the Transcriptional Regulator PecS
  57. Molecular Mechanisms of Ligand-Mediated Attenuation of DNA Binding by MarR Family Transcriptional Regulators
  58. Thermodynamics of the DNA Structural Selectivity of the Pol I DNA Polymerases from Escherichia coli and Thermus aquaticus
  59. The C-Terminal Domain of Yeast High Mobility Group Protein HMO1 Mediates Lateral Protein Accretion and In-Phase DNA Bending
  60. Urate-responsive MarR homologs from Burkholderia
  61. A tale of two functions: enzymatic activity and translational repression by carboxyltransferase
  62. The yeast high mobility group protein HMO2, a subunit of the chromatin-remodeling complex INO80, binds DNA ends
  63. Mechanism for Attenuation of DNA Binding by MarR Family Transcriptional Regulators by Small Molecule Ligands
  64. Coordination of Ribosomal Protein and Ribosomal RNA Gene Expression in Response to TOR Signaling
  65. A functional type I topoisomerase from Pseudomonas aeruginosa
  66. Mycobacterium smegmatis histone-like protein Hlp is nucleoid associated
  67. Chemical synthesis and characterization of peptides and oligomeric proteins designed to form transmembrane ion channels
  68. The C-Terminal Domain of HU-Related Histone-like Protein Hlp from Mycobacterium smegmatis Mediates DNA End-Joining
  69. DNA protection by histone-like protein HU from the hyperthermophilic eubacterium Thermotoga maritima
  70. DNA inhibits catalysis by the carboxyltransferase subunit of acetyl-CoA carboxylase: Implications for active site communication
  71. The N-terminal Extensions of Deinococcus radiodurans Dps-1 Mediate DNA Major Groove Interactions as well as Assembly of the Dodecamer
  72. The Saccharomyces cerevisiae RNA polymerase III recruitment factor subunits Brf1 and Bdp1 impose a strict sequence preference for the downstream half of the TATA box
  73. Crystal Structure of Dps-1, a Functionally Distinct Dps Protein from Deinococcus radiodurans
  74. High resolution structure of a unique member of the MarR protein family
  75. Interactions between N- and C-Terminal Domains of the Saccharomyces cerevisiae High-Mobility Group Protein HMO1 Are Required for DNA Bending
  76. The Deinococcus radiodurans-Encoded HU Protein Has Two DNA-Binding Domains
  77. Surface salt bridges modulate the DNA site size of bacterial histone-like HU proteins
  78. Negative Cooperativity of Uric Acid Binding to the Transcriptional Regulator HucR from Deinococcus radiodurans
  79. Differential DNA Binding and Protection by Dimeric and Dodecameric forms of the Ferritin Homolog Dps from Deinococcus radiodurans
  80. The Saccharomyces cerevisiae High Mobility Group Box Protein HMO1 Contains Two Functional DNA Binding Domains
  81. Substrate specificity of Helicobacter pylori histone-like HU protein is determined by insufficient stabilization of DNA flexure points
  82. HucR, a Novel Uric Acid-responsive Member of the MarR Family of Transcriptional Regulators from Deinococcus radiodurans
  83. Fluoroquinolone-dependent DNA Supercoiling by Vaccinia Topoisomerase I
  84. Histone-like Protein HU from Deinococcus radiodurans Binds Preferentially to Four-way DNA Junctions
  85. Surface Salt Bridges Modulate DNA Wrapping by the Type II DNA-Binding Protein TF1
  86. Effects of DNA strand breaks on transcription by RNA polymerase III: insights into the role of TFIIIB and the polarity of promoter opening
  87. The Role of Surface-Exposed Lysines in Wrapping DNA about the Bacterial Histone-Like Protein HU
  88. Marking the start site of RNA polymerase III transcription: the role of constraint, compaction and continuity of the transcribed DNA strand
  89. High-affinity DNA binding of HU protein from the hyperthermophile Thermotoga maritima 1 1Edited by T. Richmond
  90. Mechanisms for the enhanced thermal stability of a mutant of transcription factor 1 as explained by 1H, 15N and 13C NMR chemical shifts and secondary structure analysis
  91. The RNA polymerase III-recruiting factor TFIIIB induces a DNA bend between the TATA box and the transcriptional start site 1 1Edited by P. E. Wright
  92. Affinity, stability and polarity of binding of the TATA binding protein governed by flexure at the TATA box 1 1Edited by P. E. Wright
  93. Transcription Factor IIIB: The Architecture of Its DNA Complex, and Its Roles in Initiation of Transcription by RNA Polymerase III
  94. Twin Hydroxymethyluracil-A Base Pair Steps Define the Binding Site for the DNA-bending Protein TF1
  95. Localizing flexibility within the target site of DNA-bending proteins
  96. Structure of theBacillus subtilisPhage SPO1-Encoded Type II DNA-binding Protein TF1 in Solution
  97. Localized DNA Flexibility Contributes to Target Site Selection by DNA-bending Proteins
  98. On the Connection Between Inherent DNA Flexure and Preferred Binding of Hydroxymethyluracil- containing DNA by the Type II DNA-binding Protein TF1
  99. Design Principles and Chemical Synthesis of Oligomeric Channel Proteins
  100. Reconstitution of Channel Proteins from Excitable Cells in Lipid Bilayers: Authentic and Designed Proteins
  101. Design of a functional calcium channel protein: Inferences about an ion channel-forming motif derived from the primary structure of voltage-gated calcium channels
  102. Template-assembled synthetic proteins designed to adopt a globular, four-helix bundle conformation form ionic channels in lipid bilayers
  103. Molecular Design of Oligomeric Channel Proteins
  104. Design and synthesis of four-helix bundle channel proteins
  105. [34] Synthetic peptides and proteins as models for pore-forming structure of channel proteins
  106. Channel Proteins: From Anatomy to Design
  107. Locus-specific detection of HLA-DQ and -DR antigens by antibodies against synthetic N-terminal octapeptides of the β chain