All Stories

  1. Biom3d, a modular framework to host and develop 3D segmentation methods

    Article • Medical Image Analysis, June 2026, Elsevier

    Aline Probst

  2. H3K27me3 and H2A.Z prime cold regulated genes, and their remodelling governs plant cold response

    Article • April 2026, openRxiv

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  3. Replication-independent eviction of H2B.8 reveals chromatin reprogramming during seed imbibition

    Article • August 2025, Cold Spring Harbor Laboratory Press

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  4. New three‐dimensional nuclear morphometry tool quantifies impact of slow freezing on sperm hypercondensed chromatin

    Article • Andrology, July 2025, Wiley

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  5. Ubiquitin-dependent proteolysis of KNL2 driven by APC/CCDC20 is critical for centromere integrity and mitotic fidelity

    Article • The Plant Cell, June 2025, Oxford University Press (OUP)

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  6. Plant epigenetics: controlling genome expression to integrate developmental and environmental cues

    Article • Journal of Experimental Botany, June 2025, Oxford University Press (OUP)

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  7. Characterizations of Nuclear Organization and Chromatin Modifications in Mature Embryos from Arabidopsis Dry Seeds

    Article • November 2024, Springer Science + Business Media

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  8. The dual trxG/PcG protein ULTRAPETALA1 modulates H3K27me3 and directly enhances POLYCOMB REPRESSIVE COMPLEX 2 activity for fine-tuned reproductive transitions

    Article • October 2024, Cold Spring Harbor Laboratory Press

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  9. The histone chaperones ASF1 and HIRA are required for telomere length and 45S rDNA copy number homeostasis

    Article • The Plant Journal, October 2024, Wiley

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  10. Biom3d, a modular framework to host and develop 3D segmentation methods

    Article • July 2024, Cold Spring Harbor Laboratory Press

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  11. The TELOMERE REPEAT BINDING proteins TRB4 and TRB5 function as transcriptional activators of PRC2-controlled genes to regulate plant development

    Article • Plant Communications, July 2024, Elsevier

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  12. Evolutionarily conserved protein motifs drive interactions between the plant nucleoskeleton and nuclear pores

    Article • The Plant Cell, September 2023, Oxford University Press (OUP)

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  13. Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis

    Article • Cell Reports, August 2023, Elsevier

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  14. Maintenance and dynamic reprogramming of chromatin organization during development

    Article • The Plant Journal, February 2023, Wiley

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  15. HSFA1a modulates plant heat stress responses and alters the 3D chromatin organization of enhancer-promoter interactions

    Article • Nature Communications, January 2023, Springer Science + Business Media

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  16. Deposition and eviction of histone variants define functional chromatin states in plants

    Article • Current Opinion in Plant Biology, October 2022, Elsevier

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  17. Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in Arabidopsis

    Article • Genome Research, June 2021, Cold Spring Harbor Laboratory Press

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  18. The Histone Chaperone HIRA Is a Positive Regulator of Seed Germination

    Article • International Journal of Molecular Sciences, April 2021, MDPI AG

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  19. Evolutionary conserved protein motifs drive attachment of the plant nucleoskeleton at nuclear pores

    Article • March 2021, Cold Spring Harbor Laboratory Press

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  20. Gene dosage compensation of rRNA transcript levels inArabidopsis thalianalines with reduced ribosomal gene copy number

    Article • The Plant Cell, February 2021, Oxford University Press (OUP)

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  21. Untangling chromatin interactions

    Article • Journal of Experimental Botany, August 2020, Oxford University Press (OUP)

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  22. Similar yet critically different: the distribution, dynamics and function of histone variants

    Article • Journal of Experimental Botany, May 2020, Oxford University Press (OUP)

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  23. Looking At the Past and Heading to the Future: Meeting Summary of the 6th European Workshop on Plant Chromatin 2019 in Cologne, Germany

    Article • Frontiers in Plant Science, February 2020, Frontiers

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  24. Automated 3D bio-imaging analysis of nuclear organization by NucleusJ 2.0

    Article • Nucleus, January 2020, Taylor & Francis

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  25. The H3 histone chaperone NASP SIM 3 escorts CenH3 in Arabidopsis

    Article • The Plant Journal, August 2019, Wiley

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  26. Meeting report – INDEPTH kick-off meeting

    Article • Journal of Cell Science, June 2018, The Company of Biologists

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  27. Replication-coupled histone H3.1 deposition determines nucleosome composition and heterochromatin dynamics during Arabidopsis seedling development

    Article • New Phytologist, June 2018, Wiley

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  28. Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana

    Article • Nucleic Acids Research, March 2018, Oxford University Press (OUP)

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  29. A Compendium of Methods to Analyze the Spatial Organization of Plant Chromatin

    Article • October 2017, Springer Science + Business Media

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  30. High-Affinity LNA–DNA Mixmer Probes for Detection of Chromosome-Specific Polymorphisms of 5S rDNA Repeats in Arabidopsis thaliana

    Article • October 2017, Springer Science + Business Media

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  31. Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression

    Article • The Plant Cell, July 2017, American Society of Plant Biologists (ASPB)

    Aline Probst, Axel Poulet

  32. The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants

    Article • Journal of Cell Science, January 2017, The Company of Biologists

    Axel Poulet, Aline Probst

  33. Exploring the evolution of the proteins of the plant nuclear envelope

    Article • Nucleus, September 2016, Taylor & Francis

    Axel Poulet, Aline Probst

  34. Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana

    Article • Frontiers in Plant Science, November 2015, Frontiers

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  35. Stress-induced structural changes in plant chromatin

    Article • Current Opinion in Plant Biology, October 2015, Elsevier

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  36. The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants

    Article • The Plant Journal, February 2015, Wiley

    Axel Poulet, Aline Probst

  37. NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei

    Article • Bioinformatics, November 2014, Oxford University Press (OUP)

    Axel Poulet, Aline Probst

  38. Characterization of two distinct subfamilies of SUN-domain proteins in Arabidopsis and their interactions with the novel KASH-domain protein AtTIK

    Article • Journal of Experimental Botany, September 2014, Oxford University Press (OUP)

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  39. The plant LINC complex at the nuclear envelope

    Article • Chromosome Research, May 2014, Springer Science + Business Media

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  40. Evolutionary history of Methyltransferase 1 genes in hexaploid wheat

    Article • BMC Genomics, January 2014, Springer Science + Business Media

    Axel Poulet, Aline Probst

  41. Heterochromatin Reorganization during Early Mouse Development Requires a Single-Stranded Noncoding Transcript

    Article • Cell Reports, September 2013, Elsevier

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  42. Heterochromatin dynamics during developmental transitions in Arabidopsis — a focus on ribosomal DNA loci

    Article • Gene, August 2013, Elsevier

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  43. Structure, function and regulation of Transcription Factor IIIA: From Xenopus to Arabidopsis

    Article • Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, March 2013, Elsevier

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  44. Heterochromatin maintenance and establishment: Lessons from the mouse pericentromere

    Article • Nucleus, September 2011, Taylor & Francis

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  45. Heterochromatin establishment in the context of genome-wide epigenetic reprogramming

    Article • Trends in Genetics, May 2011, Elsevier

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  46. SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatin

    Article • Nature Genetics, February 2011, Nature

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  47. A Strand-Specific Burst in Transcription of Pericentric Satellites Is Required for Chromocenter Formation and Early Mouse Development

    Article • Developmental Cell, October 2010, Elsevier

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  48. Heterochromatin at Mouse Pericentromeres: A Model for De Novo Heterochromatin Formation and Duplication during Replication

    Article • Cold Spring Harbor Symposia on Quantitative Biology, January 2010, Cold Spring Harbor Laboratory Press

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  49. Epigenetic inheritance during the cell cycle

    Article • Nature Reviews Molecular Cell Biology, March 2009, Nature

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  50. Pericentric heterochromatin: dynamic organization during early development in mammals

    Article • Differentiation, January 2008, Elsevier

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  51. Structural differences in centromeric heterochromatin are spatially reconciled on fertilisation in the mouse zygote

    Article • Chromosoma, April 2007, Springer Science + Business Media

    Dr Wendy Dean, Aline Probst

  52. Epigenetic regulation of transcription in intermediate heterochromatin

    Article • EMBO Reports, November 2006, Wiley

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  53. Functional Genomic Analysis of CAF-1 Mutants inArabidopsis thaliana

    Article • Journal of Biological Chemistry, February 2006, American Society for Biochemistry & Molecular Biology (ASBMB)

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  54. CAF-1 Is Essential for Heterochromatin Organization in Pluripotent Embryonic Cells

    Article • PLoS Genetics, January 2006, PLOS

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  55. Tandem repetitive transgenes and fluorescent chromatin tags alter local interphase chromosome arrangement in Arabidopsis thaliana

    Article • Journal of Cell Science, August 2005, The Company of Biologists

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  56. Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis

    Article • The EMBO Journal, July 2005, Wiley

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  57. Chromatin techniques for plant cells

    Article • The Plant Journal, September 2004, Wiley

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  58. BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis

    Article • Genes & Development, April 2004, Cold Spring Harbor Laboratory Press

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  59. Arabidopsis Histone Deacetylase HDA6 Is Required for Maintenance of Transcriptional Gene Silencing and Determines Nuclear Organization of rDNA Repeats

    Article • The Plant Cell, March 2004, American Society of Plant Biologists (ASPB)

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  60. Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin

    Article • Proceedings of the National Academy of Sciences, July 2003, Proceedings of the National Academy of Sciences

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  61. Two means of transcriptional reactivation within heterochromatin

    Article • The Plant Journal, February 2003, Wiley

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  62. Two regulatory levels of transcriptional gene silencing in Arabidopsis

    Article • Proceedings of the National Academy of Sciences, October 2002, Proceedings of the National Academy of Sciences

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