What is it about?
We developed a system that uses flow cytometry and artificial intelligence to discern between blood cells and circulating tumour cells (CTCs), to be used in the future in the framework of liquid biopsy. We rely on a cutting-edge technique called holographic flow cytometry to collect images and the associated biophysical information from cells in high-throughput stream inside the so-called Lab-on-a-Chip devices. This technique allows obtaining quantitative information about the sample rather that plain images, which is used to boost artificial intelligence-based classification techniques with optimal performance. In liquid biopsy, the biggest challenge is to distinguish between the white blood cells and CTCs, since they are comparable in size. In particular, we classified with high accuracy monocytes vs. model cells from ovarian cancer, and we also minimized the flase negatives, which is a non-neglectable advantage considering the importance of a correct classification for prescreening programs.
Featured Image
Photo by Logan Moreno Gutierrez on Unsplash
Why is it important?
CTCs identification is of primary concern in the perspective of liquid biopsy used for cancer diagnosis, where detection of tumour-derived circulating material might lead to an early detection in a less-invasive fashion for the patient. For instance, in the future this analysis could be part of routine blood screening programs, as an alternative to the more invasive tissue biospy. Considering the high rarity of this material in the bloodstream, having really accurate classifiers is a crucial need, together with the minimization of the false negative classification results that could provoke the “loss” of a rare CTC. Above all, this method is completely marker-free. So far, cancer cells identification has been based on the the search for cancer-specific antigens, i.e. one has to know specifically the mutation to look for. Conversely, with the aim of implementing early screening programs, marker-free blind identification of cancer cells without knowing any prior information about the subjects/patients is a priceless added-value brought by the novel AI-aided holographic method.
Perspectives
Writing this article gave me the opportunity to clearly visualize how my everyday desk-work might positively affect our life and society, considering the relevance of the thematic discussed that, unfortunately, has more and more frequently an impact on people we love. I am aware that any step forward is just a drop in the whole sea, but I like the idea that the work of a few persons can greatly contribute to make the difference for all the others.
Vittorio Bianco
Institute of Applied Sciences and Intelligent Systems "E. Caianiello", National Research Council (ISASI-CNR)
Enforcing flow cytometry in label-free single cell analysis using artificial intelligence will open new avenues towards early cancer diagnosis by liquid biopsy! The achieved results thanks to a very significant bilateral cooperation between Italy and Israel, Consiglio Nazionale delle Ricerche and Tel Aviv University!
PIETRO FERRARO
Consiglio Nazionale delle Ricerche
Read the Original
This page is a summary of: AI-aided holographic flow cytometry for label-free identification of ovarian cancer cells in the presence of unbalanced datasets, APL Bioengineering, June 2023, American Institute of Physics,
DOI: 10.1063/5.0153413.
You can read the full text:
Resources
Research Gate personal page
Research Gate personal page: Dr. Vittorio Bianco
Personal Google Scholar page
Personal Google Scholar page: Dr. Vittorio Bianco
Personal Linkedin page
Personal Linkedin page: Prof. Natan T. Shaked
Twitter personal page
Twitter personal page: Dr. Pietro Ferraro
ISASI-CNR Institute home page
Institute of Applied Sciences and Intelligent Systems "E. Caianiello", National Research Council of Italy (ISASI-CNR)
Contributors
The following have contributed to this page