All Stories

  1. Quasimetagenomics-Based and Real-Time-Sequencing-Aided Detection and Subtyping of Salmonella enterica from Food Samples

    Article • Applied and Environmental Microbiology, December 2017, ASM Journals

    Dr Xiangyu Deng

  2. Genomic Epidemiology: Whole-Genome-Sequencing–Powered Surveillance and Outbreak Investigation of Foodborne Bacterial Pathogens

    Article • Annual Review of Food Science and Technology, February 2016, Annual Reviews

    Dr Xiangyu Deng

  3. Salmonella Serotype Determination Utilizing High-Throughput Genome Sequencing Data

    Article • Journal of Clinical Microbiology, March 2015, ASM Journals

    Dr Xiangyu Deng

  4. Comparative Analysis of Subtyping Methods against a Whole-Genome-Sequencing Standard for Salmonella enterica Serotype Enteritidis

    Article • Journal of Clinical Microbiology, November 2014, ASM Journals

    Dr Xiangyu Deng

  5. Genomic Epidemiology of Salmonella enterica Serotype Enteritidis based on Population Structure of Prevalent Lineages

    Article • Emerging Infectious Diseases, September 2014, Centers for Disease Control and Prevention (CDC)

    Dr Xiangyu Deng, PHD Jonathan G Frye, Martin Wiedmann Wiedmann

  6. High-Throughput Sequencing

    Article • August 2014, Wiley

    Dr Xiangyu Deng

  7. Transcriptome sequencing of Salmonella enterica serovar Enteritidis under desiccation and starvation stress in peanut oil

    Article • Food Microbiology, May 2012, Elsevier

    Dr Xiangyu Deng

  8. Identification of Transcriptional Promoter Sequence based on statistical filter bank model

    Article • May 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Dr Xiangyu Deng

  9. Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification

    Article • BMC Genomics, January 2010, Springer Science + Business Media

    Dr Xiangyu Deng

  10. Efficient oligonucleotide probe selection for pan-genomic tiling arrays

    Article • BMC Bioinformatics, September 2009, Springer Science + Business Media

    Dr Xiangyu Deng