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  1. 25th International Workshop on Data Mining in Bioinformatics (BIOKDD 2026)

    Article • August 2026, ACM (Association for Computing Machinery)

    Prof. Truong Son Hy, Prof. Mohammed J Zaki, Da Yan

  2. LINKER: L earning In teractions between Functional Groups and Residues with Chemical K nowledge- ...

    Article • Journal of Chemical Information and Modeling, July 2026, American Chemical Society (ACS)

    Prof. Truong Son Hy

  3. A comprehensive review of efficient deep learning for clinical medical imaging deployment

    Article • Discover Artificial Intelligence, July 2026, Springer Science + Business Media

    Prof. Truong Son Hy

  4. A wearable device dataset for mental health assessment using laser Doppler flowmetry and fluorescence spectroscopy sensors

    Article • Communications Medicine, July 2026, Springer Science + Business Media

    Prof. Truong Son Hy

  5. EquiHGNN: Scalable rotationally equivariant hypergraph neural networks

    Article • The Journal of Chemical Physics, April 2026, American Institute of Physics

    Prof. Truong Son Hy

  6. Learning to solve multiresolution matrix factorization by manifold optimization and evolutionary metaheuristics

    Article • Machine Learning Science and Technology, April 2026, Institute of Physics Publishing

    Prof. Truong Son Hy

  7. DiscoEPG: A Python package for characterization of insect electrical penetration graph (EPG) signals

    Article • Smart Agricultural Technology, March 2026, Elsevier

    Prof. Truong Son Hy

  8. Enabling multi-target drug discovery through latent evolutionary optimization and synthesis-aware prioritization (EVOSYNTH)

    Article • Communications Chemistry, February 2026, Springer Science + Business Media

    Prof. Truong Son Hy

  9. BioMedKG: multimodal contrastive representation learning in augmented BioMedical knowledge graphs

    Article • Frontiers in Systems Biology, December 2025, Frontiers

    Prof. Truong Son Hy

  10. Range-aware graph positional encoding via high-order pretraining: theory and practice

    Article • Machine Learning Science and Technology, November 2025, Institute of Physics Publishing

    Prof. Truong Son Hy

  11. EvoSynth: Enabling Multi-Target Drug Discovery through Latent Evolutionary Optimization and Synthesis-Aware Prioritization

    Article • November 2025, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  12. FFTMed: leveraging fast-fourier transform for a lightweight and adversarial-resilient medical image segmentation framework

    Article • Scientific Reports, October 2025, Springer Science + Business Media

    Prof. Truong Son Hy

  13. RELIC: Reinforcement Learning Based Ising Optimization via Graph Compression

    Article • August 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Prof. Truong Son Hy

  14. 24 th International Workshop on Data Mining in Bioinformatics (BIOKDD 2025)

    Article • August 2025, ACM (Association for Computing Machinery)

    Da Yan, Prof. Mohammed J Zaki, Prof. Truong Son Hy

  15. Effective Design of Sequences with Limited Data

    Article • July 2025, ACM (Association for Computing Machinery)

    Prof. Truong Son Hy, Thanh Tran

  16. A Knowledge Graph for Vietnamese Traditional Medicine and Its Use in AI Question Answering

    Article • ACM Transactions on Asian and Low-Resource Language Information Processing, June 2025, ACM (Association for Computing Machinery)

    Prof. Truong Son Hy

  17. SilVar-Med: A Speech-Driven Visual Language Model for Explainable Abnormality Detection in Medical Imaging

    Article • June 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Prof. Truong Son Hy

  18. Effective Context Modeling Framework for Emotion Recognition in Conversations

    Article • April 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Prof. Truong Son Hy

  19. Machine learning for automated electrical penetration graph analysis of aphid feeding behavior: Accelerating research on insect-plant interactions

    Article • PLOS One, April 2025, PLOS

    Prof. Truong Son Hy

  20. Protein Design by Directed Evolution Guided by Large Language Models

    Article • IEEE Transactions on Evolutionary Computation, April 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Prof. Truong Son Hy

  21. LatentDE: latent-based directed evolution for protein sequence design

    Article • Machine Learning Science and Technology, March 2025, Institute of Physics Publishing

    Prof. Truong Son Hy

  22. LANTERN: Leveraging Large Language Models and Transformers for Enhanced Molecular Interactions

    Article • February 2025, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  23. DrugPipe: Generative artificial intelligence-assisted virtual screening pipeline for generalizable and efficient drug repurposing

    Article • Biology Methods and Protocols, January 2025, Oxford University Press (OUP)

    Viet Thanh Duy Nguyen, Prof. Truong Son Hy

  24. Hybridising Reinforcement Learning and Heuristics for Hierarchical Directed Arc Routing Problems

    Article • January 2025, Elsevier

    Prof. Truong Son Hy

  25. MultiMed: Multilingual Medical Speech Recognition via Attention Encoder Decoder

    Article • January 2025, Association for Computational Linguistics (ACL)

    Prof. Truong Son Hy

  26. Sentiment Reasoning for Healthcare

    Article • January 2025, Association for Computational Linguistics (ACL)

    Prof. Truong Son Hy

  27. Medical Spoken Named Entity Recognition

    Article • January 2025, Association for Computational Linguistics (ACL)

    Prof. Truong Son Hy

  28. SilVar: Speech-Driven Multimodal Model for Reasoning Visual Question Answering and Object Localization

    Article • January 2025, Association for Computational Linguistics (ACL)

    Prof. Truong Son Hy

  29. Generative AI-assisted Virtual Screening Pipeline for Generalizable and Efficient Drug Repurposing

    Article • December 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  30. DiscoEPG: A Python package for characterization of insect electrical penetration graph (EPG) signals

    Article • December 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  31. ProteinReDiff: Ligand-binding Proteins Redesign by Equivariant Diffusion-based Generative Models

    Article • Structural Dynamics, November 2024, American Institute of Physics

    Viet Thanh Duy Nguyen, Prof. Truong Son Hy

  32. LightMed: A Light-weight and Robust FFT-Based Model for Adversarially Resilient Medical Image Segmentation

    Article • September 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  33. Real-time Speech Summarization for Medical Conversations

    Article • September 2024, International Speech Communication Association

    Prof. Truong Son Hy

  34. VieMedKG: Knowledge Graph and Benchmark for Traditional Vietnamese Medicine

    Article • August 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  35. MGLEP: Multimodal Graph Learning for Modeling Emerging Pandemics with Big Data

    Article • Scientific Reports, July 2024, Springer Science + Business Media

    Prof. Truong Son Hy

  36. Machine learning for characterizing plant-insect interactions through electrical penetration graphic signal

    Article • June 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  37. Multimodal protein representation learning and target-aware variational auto-encoders for protein-binding ligand generation

    Article • Machine Learning Science and Technology, April 2024, Institute of Physics Publishing

    Prof. Truong Son Hy

  38. Complex-based Ligand-Binding Proteins Redesign by Equivariant Diffusion-based Generative Models

    Article • April 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  39. Latent-based Directed Evolution accelerated by Gradient Ascent for Protein Sequence Design

    Article • April 2024, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  40. Multimodal pretraining for unsupervised protein representation learning

    Article • Biology Methods and Protocols, January 2024, Oxford University Press (OUP)

    Prof. Truong Son Hy

  41. Multimodal Pretraining for Unsupervised Protein Representation Learning

    Article • December 2023, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  42. Protein Design by Directed Evolution Guided by Large Language Models

    Article • November 2023, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  43. Multimodal Protein Representation Learning and Target-aware Variational Auto-encoders for Protein-binding Ligand Generation

    Article • November 2023, Research Square

    Prof. Truong Son Hy

  44. Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning

    Article • August 2023, Cold Spring Harbor Laboratory Press

    Prof. Truong Son Hy

  45. Multiresolution graph transformers and wavelet positional encoding for learning long-range and hierarchical structures

    Article • The Journal of Chemical Physics, July 2023, American Institute of Physics

    Prof. Truong Son Hy

  46. Multiresolution equivariant graph variational autoencoder

    Article • Machine Learning Science and Technology, March 2023, Institute of Physics Publishing

    Prof. Truong Son Hy

  47. ViDeBERTa: A powerful pre-trained language model for Vietnamese

    Article • January 2023, Association for Computational Linguistics (ACL)

    Prof. Truong Son Hy

  48. Predicting molecular properties with covariant compositional networks

    Article • The Journal of Chemical Physics, June 2018, American Institute of Physics

    Prof. Truong Son Hy