Professor Tom Coenye
Universiteit Gent
Professor, Life Sciences
Belgium
My co-authors include
Dr Carmen Alvarez-Lorenzo
Professor Katri Johanna Bjorkroth
Professor Freddy Haesebrouck
My Publications
Low iron-induced small RNA BrrF regulates central metabolism and oxidative stress respo...
PLoS ONE
July 2020
Laser-induced vapour nanobubbles improve drug diffusion and efficiency in bacterial bio...
Nature Communications
October 2018
Targeting the Nonmevalonate Pathway in Burkholderia cenocepacia Increases Susceptibilit...
Antimicrobial Agents and Chemotherapy
February 2018
Developing an in vitro artificial sebum model to study Propionibacterium acnes biof...
Anaerobe
February 2018
The Small RNA ncS35 Regulates Growth in Burkholderia cenocepacia J2315
mSphere
January 2018
Elucidation of the mechanism behind the potentiating activity of baicalin against Burkh...
PLoS ONE
January 2018
Identification of small RNAs abundant in Burkholderia cenocepacia biofilms reveal putat...
Scientific Reports
November 2017
Community Composition Determines Activity of Antibiotics against Multispecies Biofilms
Antimicrobial Agents and Chemotherapy
July 2017
A Topical Hydrogel with Deferiprone and Gallium-Protoporphyrin Targets Bacterial Iron M...
Antimicrobial Agents and Chemotherapy
April 2017
Metabolic activity, urease production, antibiotic resistance and virulence in dual spec...
PLoS ONE
March 2017
Screening a repurposing library for potentiators of antibiotics against Staphylococcus ...
International Journal of Antimicrobial Agents
January 2017
Effect of β-Lactamase inhibitors on in vitro activity of β-Lactam antibiotics against B...
Antimicrobial Resistance and Infection Control
November 2016
The Role of Reactive Oxygen Species in Antibiotic-Induced Cell Death in Burkholderia ce...
PLoS ONE
July 2016
The Role of Efflux and Physiological Adaptation in Biofilm Tolerance and Resistance
Journal of Biological Chemistry
April 2016
Orthopaedic device-related infection: current and future interventions for improved pre...
EFORT Open Reviews
April 2016
Differential Roles of RND Efflux Pumps in Antimicrobial Drug Resistance of Sessile and ...
Antimicrobial Agents and Chemotherapy
September 2014
The Family Burkholderiaceae
January 2014
Transport of Nanoparticles and Tobramycin-loaded Liposomes in Burkholderia cepacia Comp...
PLoS ONE
November 2013
Evaluation of a new high-throughput method for identifying quorum quenching bacteria
Scientific Reports
October 2013
The presence of antibiotic-resistant nosocomial pathogens in endotracheal tube biofilms...
Pathogens and Disease
October 2013
Genomewide screening for genes involved in biofilm formation and miconazole susceptibi...
FEMS Yeast Research
September 2013
Transport of nanoparticles in cystic fibrosis sputum and bacterial biofilms by single-p...
Nanomedicine
June 2013
Corrigendum to “Synthesis and evaluation of thiazolidinedione and dioxazaborocane analo...
Bioorganic & Medicinal Chemistry
May 2013
Comment on: Synergistic antibacterial efficacy of early combination treatment with tobr...
Journal of Antimicrobial Chemotherapy
April 2013
Biofilm inhibitory and eradicating activity of wound care products againstStaphylococcu...
Journal of Applied Microbiology
April 2013
Biofilm-Grown Burkholderia cepacia Complex Cells Survive Antibiotic Treatment by Avoidi...
PLoS ONE
March 2013
Antiseptic cyclodextrin-functionalized hydrogels and gauzes for loading and delivery of...
Biofouling
March 2013
Synthesis and evaluation of thiazolidinedione and dioxazaborocane analogues as inhibito...
Bioorganic & Medicinal Chemistry
February 2013
Phenotypic and Genotypic Characterisation of Burkholderia cenocepacia J2315 Mutants Aff...
PLoS ONE
January 2013
Susceptibility of adult pigeons and hybrid falcons to experimental aspergillosis
Avian Pathology
December 2012
Synthesis and evaluation of the quorum sensing inhibitory effect of substituted triazol...
Bioorganic & Medicinal Chemistry
August 2012
A Quorum Sensing-Disrupting Brominated Thiophenone with a Promising Therapeutic Potenti...
PLoS ONE
July 2012
Assessment of Microbial Diversity in Biofilms Recovered from Endotracheal Tubes Using C...
PLoS ONE
June 2012
Transcription factor Efg1 contributes to the tolerance of Candida albicans biofilms aga...
Journal of Medical Microbiology
March 2012
The plant defensin RsAFP2 induces cell wall stress, septin mislocalization and accumula...
Molecular Microbiology
March 2012
Eradication of Propionibacterium acnes biofilms by plant extracts and putative identifi...
Phytomedicine
March 2012
Phytosphingosine-1-Phosphate Is a Signaling Molecule Involved in Miconazole Resistance ...
Antimicrobial Agents and Chemotherapy
February 2012
Evaluation of Nd:YAG and Er:YAG irradiation, antibacterial photodynamic therapy and sod...
International Endodontic Journal
January 2012
Electrospun cellulose acetate phthalate fibers for semen induced anti-HIV vaginal drug ...
Biomaterials
January 2012
Isolation and identification of quorum quenching bacteria from environmental samples
Journal of Microbiological Methods
November 2011
Quality control of Saccharomyces boulardii- a response to the Letter of Honraet and Del...
Journal of Applied Microbiology
October 2011
Superoxide Dismutases Are Involved in Candida albicans Biofilm Persistence against Mico...
Antimicrobial Agents and Chemotherapy
July 2011
Resistance of the Burkholderia cepacia complex to fosmidomycin and fosmidomycin derivat...
International Journal of Antimicrobial Agents
July 2011
In vitro inactivation of endodontic pathogens with Nd:YAG and Er:YAG lasers
Lasers in Medical Science
June 2011
Quorum Sensing Inhibitors Increase the Susceptibility of Bacterial Biofilms to Antibiot...
Antimicrobial Agents and Chemotherapy
March 2011
Molecular Mechanisms of Chlorhexidine Tolerance in Burkholderia cenocepacia Biofilms
Antimicrobial Agents and Chemotherapy
February 2011
Structure-Activity Relationship of Cinnamaldehyde Analogs as Inhibitors of AI-2 Based Q...
PLoS ONE
January 2011
Biofilm inhibition and drug-eluting properties of novel DMAEMA-modified polyethylene an...
Biofouling
January 2011
Bio-inspired porous SiC ceramics loaded with vancomycin for preventing MRSA infections
Journal of Materials Science Materials in Medicine
December 2010
In vitro activity of temocillin against planktonic and sessile Burkholderia cepacia com...
Journal of Cystic Fibrosis
December 2010
What can be learned from genotyping of fungi?
Medical Mycology
November 2010
Vancomycin release from poly(d,l-lactic acid) spray-coated hydroxyapatite fibers
European Journal of Pharmaceutics and Biopharmaceutics
November 2010
Transport and delivery of antimicrobial agents in Burkholderia biofilms
Journal of Controlled Release
November 2010
In vitro and in vivo model systems to study microbial biofilm formation
Journal of Microbiological Methods
November 2010
Functionalization of acrylic hydrogels with α-, β- or γ-cyclodextrin modulates protein ...
Acta Biomaterialia
October 2010
Response of sessile cells to stress: from changes in gene expression to phenotypic adap...
FEMS Immunology & Medical Microbiology
August 2010
Quality control of fifteen probiotic products containing Saccharomyces boulardii
Journal of Applied Microbiology
July 2010
Social interactions in theBurkholderia cepaciacomplex: biofilms and quorum sensing
Future Microbiology
July 2010
Prevention of Candida albicans Biofilm Formation by Covalently Bound Dimethylaminoethyl...
Mycopathologia
May 2010
Transcriptional response to fluconazole and amphotericin B in Candida albicans biofilms
Research in Microbiology
May 2010
Rapid quantification of itraconazole-resistant Aspergillus fumigatus in air
Journal of Microbiological Methods
May 2010
Cyclodextrin-functionalized biomaterials loaded with miconazole prevent Candida albican...
Acta Biomaterialia
April 2010
Candida albicans biofilm formation on peptide functionalized polydimethylsiloxane
Biofouling
April 2010
The 285 kDa Bap/RTX hybrid cell surface protein (SO4317) of Shewanella oneidensis MR-1 ...
Research in Microbiology
March 2010
Rapid and Direct Quantification of Viable Candida Species in Whole Blood by Use of Immu...
Journal of Clinical Microbiology
February 2010
Fungicidal activity of miconazole against Candida spp. biofilms
Journal of Antimicrobial Chemotherapy
February 2010
Real-time PCR expression profiling of genes encoding potential virulence factors in Can...
BMC Microbiology
January 2010
Transcriptional response of Burkholderia cenocepacia J2315 sessile cells to treatments ...
BMC Genomics
January 2010
Detection and Quantification of Bacteria and Fungi Using Solid-Phase Cytometry
January 2010
Membrane Rafts Are Involved in Intracellular Miconazole Accumulation in Yeast Cells
Journal of Biological Chemistry
September 2009
Role of PvdQ in Pseudomonas aeruginosa virulence under iron-limiting conditions
Microbiology
September 2009
AI-2 quorum-sensing inhibitors affect the starvation response and reduce virulence in s...
Microbiology
September 2009
Inhibition of Candida albicans Biofilm Formation by Antimycotics Released from Modified...
Mycopathologia
September 2009
In vitro activity of ceftazidime, ciprofloxacin, meropenem, minocycline, tobramycin and...
Journal of Antimicrobial Chemotherapy
July 2009
Arcobacter thereius sp. nov., isolated from pigs and ducks
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
July 2009
Comparison of multiple typing methods for Aspergillus fumigatus
Clinical Microbiology and Infection
July 2009
Rapid Detection and Quantification of Aspergillus fumigatus in Environmental Air Sampl...
Environmental Science & Technology
May 2009
Effectiveness of different laser systems to killEnterococcus faecalisin aqueous suspens...
International Endodontic Journal
April 2009
Resistance of planktonic and biofilm-grown Burkholderia cepacia complex isolates to the...
Journal of Antimicrobial Chemotherapy
March 2009
Use of quorum sensing inhibitors to interfere with biofilm formation and development in...
Research in Microbiology
March 2009
Detection and quantification of viable airborne bacteria and fungi using solid-phase cy...
Nature Protocols
February 2009
Evaluation of the efficacy of disinfection procedures against Burkholderia cenocepacia ...
Journal of Hospital Infection
December 2008
Pilot study using doxycycline-releasing stents to ameliorate postoperative healing qual...
Wound Repair and Regeneration
October 2008
Polypropylene grafted with smart polymers (PNIPAAm/PAAc) for loading and controlled rel...
European Journal of Pharmaceutics and Biopharmaceutics
October 2008
Use of the modified Robbins device to study thein vitrobiofilm removal efficacy of Nitr...
Journal of Applied Microbiology
September 2008
Microsatellite typing of Aspergillus fumigatus isolates recovered from deep organ sampl...
Diagnostic Microbiology and Infectious Disease
September 2008
Monitoring ALS1 and ALS3 Gene Expression During In Vitro Candida albicans Biofilm Forma...
Mycopathologia
August 2008
Diversity and occurrence ofBurkholderiaspp. in the natural environment
FEMS Microbiology Reviews
July 2008
High-resolution genotyping of Aspergillus fumigatus isolates recovered from chronically...
European Journal of Clinical Microbiology & Infectious Diseases
May 2008
Factors influencing the trailing endpoint observed in Candida albicans susceptibility t...
Clinical Microbiology and Infection
May 2008
Resistance of planktonic and biofilm-grown Burkholderia cepacia complex isolates to the...
Journal of Antimicrobial Chemotherapy
March 2008
Comparison of multiple methods for quantification of microbial biofilms grown in microt...
Journal of Microbiological Methods
February 2008
Enumeration of airborne bacteria and fungi using solid phase cytometry
Journal of Microbiological Methods
January 2008
Cinnamaldehyde and cinnamaldehyde derivatives reduce virulence in Vibrio spp. by decrea...
BMC Microbiology
January 2008
Identification of putative noncoding RNA genes in the Burkholderia cenocepacia J2315 g...
FEMS Microbiology Letters
November 2007
Efficacy of silver-releasing rubber for the prevention ofPseudomonas aeruginosabiofilm ...
Biofouling
November 2007
Biofilm formation by Propionibacterium acnes is associated with increased resistance to...
Research in Microbiology
May 2007
In Vitro Inhibition of Streptococcus mutans Biofilm Formation on Hydroxyapatite by Subi...
Antimicrobial Agents and Chemotherapy
January 2007
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
January 2007
Pannonibacter phragmitetus, described from a Hungarian soda lake in 2003, had been reco...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
December 2006
Classification of Centers for Disease Control Group Eugonic Fermenter (EF)-4a and EF-4b...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
August 2006
Burkholderia mimosarum sp. nov., isolated from root nodules of Mimosa spp. from Taiwan ...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
August 2006
Chryseobacterium piscium sp. nov., isolated from fish of the South Atlantic Ocean off S...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
June 2006
Diversity of Weissella viridescens strains associated with “Morcilla de Burgos”
International Journal of Food Microbiology
May 2006
Streptococcus parauberis associated with modified atmosphere packaged broiler meat prod...
International Journal of Food Microbiology
February 2006
BMC Molecular Biology
January 2006
Transmission of Burkholderia cepacia Complex: Evidence for New Epidemic Clones Infectin...
Journal of Clinical Microbiology
October 2005
Chryseobacterium vrystaatense sp. nov., isolated from raw chicken in a chicken-processi...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
September 2005
Re-evaluating prokaryotic species
Nature Reviews Microbiology
August 2005
Lactobacillus oligofermentans sp. nov., Associated with Spoilage of Modified-Atmosphere...
Applied and Environmental Microbiology
August 2005
A novel strategy for the isolation and identification of environmental Burkholderia ce...
FEMS Microbiology Letters
August 2005
Development of a recA Gene-Based Identification Approach for the Entire Burkholderia Genus
Applied and Environmental Microbiology
July 2005
Use of PCR Analyses To Define the Distribution of Ralstonia Species Recovered from Pati...
Journal of Clinical Microbiology
July 2005
Displacement of ɛ-proteobacterial core genes by horizontally transferred homologous genes
Research in Microbiology
June 2005
Burkholderia phytofirmans sp. nov., a novel plant-associated bacterium with plant-benef...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
May 2005
Towards a prokaryotic genomic taxonomy
FEMS Microbiology Reviews
April 2005
Arcobacter cibarius sp. nov., isolated from broiler carcasses
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
March 2005
Organisation of the S10 , spc and alpha ribosomal protein gene clusters in prokaryotic...
FEMS Microbiology Letters
January 2005
Characterization of Mononucleotide Repeats in Sequenced Prokaryotic Genomes
DNA Research
January 2005
Advenella incenata gen. nov., sp. nov., a novel member of the Alcaligenaceae, isolated ...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
January 2005
Burkholderia phenoliruptrix sp. nov., to Accommodate the 2,4,5-Trichlorophenoxyacetic A...
Systematic and Applied Microbiology
December 2004
Polyphasic Characterisation of Burkholderia cepacia-Like Isolates Leading to the Emende...
Systematic and Applied Microbiology
December 2004
Genome Update: correlation of bacterial genomic properties
Microbiology
December 2004
Taxonomy of the genus Cupriavidus: a tale of lost and found
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
November 2004
Recovery of Burkholderia cenocepacia strain PHDC from cystic fibrosis patients in Europe
Thorax
November 2004
Enterococcus hermanniensis sp. nov., from modified-atmosphere-packaged broiler meat and...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
September 2004
Stenotrophomonas africana Drancourt et al. 1997 is a later synonym of Stenotrophomonas ...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
July 2004
Bacterial whole-genome sequences: minimal information and strain availability
Microbiology
July 2004
PCR-Based Assay for Differentiation of Pseudomonas aeruginosa from Other Pseudomonas Sp...
Journal of Clinical Microbiology
May 2004
Proposal to accommodate Burkholderia cepacia genomovar VI as Burkholderia dolosa sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
May 2004
Genome Update: rRNAs in sequenced microbial genomes
Microbiology
May 2004
Identification of genomic groups in the genus Stenotrophomonas using gyrB RFLP analysis
FEMS Immunology & Medical Microbiology
April 2004
Use of the Genomic Signature in Bacterial Classification and Identification
Systematic and Applied Microbiology
January 2004
A Genomic Perspective on the Relationship Between the Aquificales and the e-Proteobacteria
Systematic and Applied Microbiology
January 2004
Extracting phylogenetic information from whole-genome sequencing projects: the lactic a...
Microbiology
December 2003
Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bact...
FEMS Microbiology Letters
November 2003
Kerstersia gyiorum gen. nov., sp. nov., a novel Alcaligenes faecalis-like organism isol...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
November 2003
Achromobacter insolitus sp. nov. and Achromobacter spanius sp. nov., from human clinica...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
November 2003
Diversity and significance of Burkholderia species occupying diverse ecological niches
Environmental Microbiology
September 2003
Ralstonia respiraculi sp. nov., isolated from the respiratory tract of cystic fibrosis ...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
September 2003
Classification of Ralstonia pickettii-like isolates from the environment and clinical s...
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
July 2003
Identification by Subtractive Hybridization of a Novel Insertion Element Specific for T...
Journal of Clinical Microbiology
June 2003
Updated Version of the Burkholderia cepacia Complex Experimental Strain Panel
Journal of Clinical Microbiology
June 2003
Burkholderia cenocepacia sp. nov.—a new twist to an old story
Research in Microbiology
March 2003
BMC Genomics
January 2003
Population structure analysis of Burkholderia cepacia genomovar III: varying degrees of...
Microbiology
January 2003
Molecular epidemiology of Burkholderia species
Frontiers in Bioscience
January 2003
Comparative Assessment of Genotyping Methods for Epidemiologic Study of Burkholderia ce...
Journal of Clinical Microbiology
September 2002
Characterization of Unusual Bacteria Isolated from Respiratory Secretions of Cystic Fib...
Journal of Clinical Microbiology
June 2002
Burkholderia anthina sp. nov. and Burkholderia pyrrocinia , two additional Burkholderi...
FEMS Immunology & Medical Microbiology
June 2002
An epidemic Burkholderia cepacia complex strain identified in soil
The Lancet
June 2002
Multilocus Restriction Typing: A Novel Tool for Studying Global Epidemiology of Burkho...
The Journal of Infectious Diseases
May 2002
Ribosomal DNA-Directed PCR for Identification of Achromobacter (Alcaligenes) xylosoxida...
Journal of Clinical Microbiology
April 2002
Characterization of Pseudoalteromonas citrea and P. nigrifaciens Isolated from Differen...
Systematic and Applied Microbiology
January 2002
Identification of Pandoraea Species by 16S Ribosomal DNA-Based PCR Assays
Journal of Clinical Microbiology
December 2001
Taxonomy and Identification of the Burkholderia cepacia Complex
Journal of Clinical Microbiology
October 2001
Phenotypic Methods for Determining Genomovar Status of the Burkholderia cepacia Complex
Journal of Clinical Microbiology
March 2001
Burkholderia cepacia Genomovar III Is a Common Plant-Associated Bacterium
Applied and Environmental Microbiology
February 2001
First report of Pandoraea norimbergensis isolated from food—potential clinical signific...
Food Microbiology
February 2001
Misidentification of Burkholderia cepacia in US Cystic Fibrosis Treatment Centers
CHEST Journal
June 2000