All Stories

  1. Type-specific EV-D68 real-time RT-PCR assay for the detection of all extant enterovirus D68 strains
  2. Enterovirus D68–Associated Respiratory Illness in Children
  3. Genome Announcement of Four Parechovirus A3 Isolates from the United States of America
  4. Pediatric Rash Illness Outbreak with Initial Positive Measles Immunoglobulin M Antibody Test Results — American Samoa, March–July 2023
  5. Novel adomavirus associated with proliferative skin lesions affecting the dermal denticles of a sand tiger shark (Carcharias taurus)
  6. Discovery and Genomic Characterization of a Novel Hepadnavirus from Asymptomatic Anadromous Alewife (Alosa pseudoharengus)
  7. Diagnosis, isolation and description of a novel amnoonvirus recovered from diseased fancy guppies, Poecilia reticulata
  8. Surveillance for Acute Flaccid Myelitis ― United States, 2018–2022
  9. Duration of Enterovirus D68 RNA Shedding in the Upper Respiratory Tract and Transmission among Household Contacts, Colorado, USA
  10. Molecular Epidemiology
  11. Nearly Complete Genome Sequences of Type 2 Sabin-Like Polioviruses from Northern Nigerian Poliovirus Surveillance, 2016 to 2018
  12. Wastewater Testing and Detection of Poliovirus Type 2 Genetically Linked to Virus Isolated from a Paralytic Polio Case — New York, March 9–October 11, 2022
  13. Type-specific EV-D68 real-time RT-PCR assay for the detection of all extant enterovirus D68 strains
  14. Public health response to a case of paralytic poliomyelitis in an unvaccinated person and detection of poliovirus in wastewater—New York, June–August 2022
  15. Public Health Response to a Case of Paralytic Poliomyelitis in an Unvaccinated Person and Detection of Poliovirus in Wastewater — New York, June–August 2022
  16. VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data
  17. Next-generation sequencing of human respiratory syncytial virus subgroups A and B genomes
  18. Enterovirus D68-Associated Acute Respiratory Illness ─ New Vaccine Surveillance Network, United States, July–November 2018–2020
  19. A novel herpes-like virus inducing branchial lesions in a tiger shark (Galeocerdo cuvier)
  20. Whole-Genome Sequences of Enteroviruses D94 and D111 Isolated from Stool Specimens in Angola
  21. Author Correction: Pan-viral serology implicates enteroviruses in acute flaccid myelitis
  22. Metagenomic sequencing generates the whole genomes of porcine rotavirus A, C, and H from the United States
  23. CrAssphage as a Novel Tool to Detect Human Fecal Contamination on Environmental Surfaces and Hands
  24. First Isolation of a Novel Aquatic Flavivirus from Chinook Salmon (Oncorhynchus tshawytscha) and Its In Vivo Replication in a Piscine Animal Model
  25. Characterization of a novel picornavirus isolated from moribund aquacultured clownfish
  26. Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus
  27. The effect of variant interference on de novo assembly for viral deep sequencing
  28. Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses
  29. Molecular and Biological Characterization of a Cervidpoxvirus Isolated From Moose with Necrotizing Dermatitis
  30. Genomic characterization of a novel circovirus from a stranded Longman’s beaked whale (Indopacetus pacificus)
  31. Antifungal Triazole Posaconazole Targets an Early Stage of the Parechovirus A3 Life Cycle
  32. Haiti Poliovirus Environmental Surveillance
  33. Characterization of a peribunyavirus isolated from largemouth bass (Micropterus salmoides)
  34. Nearly Complete Genome Sequence of an Echovirus 30 Strain from a Cluster of Aseptic Meningitis Cases in California, September 2017
  35. The effect of variant interference on de novo assembly for viral deep sequencing
  36. Pan-viral serology implicates enteroviruses in acute flaccid myelitis
  37. Outbreak of diarrhoea in piglets caused by novel rotavirus genotype G4P[49] in north‐western district of Bangladesh, February 2014
  38. Antibodies to Enteroviruses in Cerebrospinal Fluid of Patients with Acute Flaccid Myelitis
  39. Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses
  40. Identification of “Missing Link” Families of Small DNA Tumor Viruses
  41. Characterization of Novel Reoviruses Wad Medani Virus (Orbivirus) and Kundal Virus (Coltivirus) Collected from Hyalomma anatolicum Ticks in India during Surveillance for Crimean Congo Hemorrhagic Fever
  42. Strengthening laboratory surveillance of viral pathogens: Experiences and lessons learned building next-generation sequencing capacity in Ghana
  43. Complete genome sequence of a divergent strain of Tibetan frog hepatitis B virus associated with a concave-eared torrent frog (Odorrana tormota)
  44. Genomic sequencing of a virus representing a novel type within the species Dyopipapillomavirus 1 in an Indian River Lagoon bottlenose dolphin
  45. Complete genome sequence of a divergent strain of Tibetan frog hepatitis B virus associated to concave-eared torrent frog Odorrana tormota: TFHBV-Ot virus sequence
  46. Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017
  47. Characterization of the Genome Sequences of Enterovirus C109 from Two Respiratory Disease Cases in Florida, 2016
  48. Genetic diversity of human sapovirus across the Americas
  49. Microscopic and Molecular Evidence of the First Elasmobranch Adomavirus, the Cause of Skin Disease in a Giant Guitarfish, Rhynchobatus djiddensis
  50. Complete Genome Sequencing of a Novel Type ofOmikronpapillomavirus 1in Indian River Lagoon Bottlenose Dolphins (Tursiops truncatus)
  51. Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018
  52. Taxonomy of the order Mononegavirales: update 2018
  53. Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes
  54. Detection and genetic characterization of bovine kobuvirus from calves in Egypt
  55. Whole-Genome Sequence of Human Rhinovirus C47, Isolated from an Adult Respiratory Illness Outbreak in Butte County, California, 2017
  56. Two new species of betatorqueviruses identified in a human melanoma that metastasized to the brain
  57. U50: A New Metric for Measuring Assembly Output Based on Non-Overlapping, Target-Specific Contigs
  58. Automated Next Generation Sequencing Bioinformatics Pipelines for Pathogen Discovery and Surveillance
  59. Complete Genome Sequences of Mumps and Measles Virus Isolates from Three States in the United States
  60. Genomic characterization of a novel calicivirus, FHMCV-2012, from baitfish in the USA
  61. ENDEMIC INFECTION OF STRANDED SOUTHERN SEA OTTERS (ENHYDRA LUTRIS NEREIS) WITH NOVEL PARVOVIRUS, POLYOMAVIRUS, AND ADENOVIRUS
  62. Novel Avulaviruses in Penguins, Antarctica
  63. Genomic Characterization of Three Melon Necrotic Spot Viruses Detected in Human Stool Specimens
  64. Molecular characterization of a novel orthomyxovirus from rainbow and steelhead trout ( Oncorhynchus mykiss )
  65. Detection and Genomic Characterization of Enterovirus D68 in Respiratory Samples Isolated in the United States in 2016
  66. High-Throughput Next-Generation Sequencing of Polioviruses
  67. Investigation of epizootic papillomatosis in bluegill Lepomis macrochirus (Rafinesque 1810) using next-generation sequencing
  68. Bunyaviruses are common in male and femaleIxodes scapularisticks in central Pennsylvania
  69. Distinct Viral Lineages from Fish and Amphibians Reveal the Complex Evolutionary History of Hepadnaviruses
  70. Complete Sequence of the Smallest Polyomavirus Genome, Giant Guitarfish ( Rhynchobatus djiddensis ) Polyomavirus 1
  71. The Ancient Evolutionary History of Polyomaviruses
  72. Genomic Sequence of the First Porcine Rotavirus Group H Strain in the United States
  73. Characterization of a Salivirus ( Picornaviridae ) from a Diarrheal Child in Guatemala
  74. Virus-associated papillomatous skin lesions in a giant guitarfish Rhynchobatus djiddensis: a case report
  75. Reorganization and expansion of the nidoviral family Arteriviridae
  76. Small circular single stranded DNA viral genomes in unexplained cases of human encephalitis, diarrhea, and in untreated sewage
  77. Rabovirus: a proposed new picornavirus genus that is phylogenetically basal to enteroviruses and sapeloviruses
  78. ORAL PAPILLOMATOSIS CAUSED BY ENHYDRA LUTRIS PAPILLOMAVIRUS 1 (ElPV-1) IN SOUTHERN SEA OTTERS ( ENHYDRA LUTRIS NEREIS ) IN CALIFORNIA, USA
  79. A Metagenomics and Case-Control Study To Identify Viruses Associated with Bovine Respiratory Disease
  80. A tortoise-infecting picornavirus expands the host range of the family Picornaviridae
  81. An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data
  82. A diverse group of small circular ssDNA viral genomes in human and non-human primate stools
  83. Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
  84. Identification of several clades of novel single-stranded circular DNA viruses with conserved stem-loop structures in pig feces
  85. Metagenomic identification of novel enteric viruses in urban wild rats and genome characterization of a group A rotavirus
  86. Feline fecal virome reveals novel and prevalent enteric viruses
  87. Divergent Picobirnaviruses in Human Feces
  88. Identification of a Novel Single-Stranded Circular DNA Virus in Pig Feces
  89. Unique Circovirus-Like Genome Detected in Pig Feces
  90. Novel circular single-stranded DNA virus from turkey faeces
  91. Isolation and Molecular Characterization of a Novel Picornavirus from Baitfish in the USA
  92. RNA Viral Metagenome of Whiteflies Leads to the Discovery and Characterization of a Whitefly-Transmitted Carlavirus in North America
  93. Distinct Lineage of Vesiculovirus from Big Brown Bats, United States
  94. Metagenomic identification of a nodavirus and a circular ssDNA virus in semi-purified viral nucleic acids from the hepatopancreas of healthy Farfantepenaeus duorarum shrimp
  95. Identification of an Astrovirus Commonly Infecting Laboratory Mice in the US and Japan
  96. Divergent Picornavirus from a Turkey with Gastrointestinal Disease
  97. A divergent clade of circular single-stranded DNA viruses from pig feces
  98. Molecular and microscopic evidence of viruses in marine copepods
  99. Diversity of viruses detected by deep sequencing in pigs from a common background
  100. High Variety of Known and New RNA and DNA Viruses of Diverse Origins in Untreated Sewage
  101. Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes
  102. Exploring the Diversity of Plant DNA Viruses and Their Satellites Using Vector-Enabled Metagenomics on Whiteflies
  103. Metagenomic identification of a novel anellovirus in Pacific harbor seal (Phoca vitulina richardsii) lung samples and its detection in samples from multiple years
  104. Vector-based metagenomics for animal virus surveillance
  105. Novel anellovirus discovered from a mortality event of captive California sea lions
  106. Discovery of a Novel Single-Stranded DNA Virus from a Sea Turtle Fibropapilloma by Using Viral Metagenomics
  107. B7+ iris pigment epithelium induce CD8+ T regulatory cells; both suppress CTLA-4+ T cells
  108. Military involvement in refugee crises: a positive evolution?