All Stories

  1. Performance assessment of sample-specific network control methods for bulk and single-cell biological data analysis

    Article • PLoS Computational Biology, May 2021, PLOS

    Tao Zeng, Shaowu Zhang

  2. A novel network control model for identifying personalized driver genes in cancer

    Article • PLoS Computational Biology, November 2019, PLOS

    Shaowu Zhang, Luonan Chen

  3. Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods

    Article • PLoS Computational Biology, January 2019, PLOS

    Shaowu Zhang

  4. Brief Survey of Biological Network Alignment and a Variant with Incorporation of Functional Annotations

    Article • Current Bioinformatics, December 2018, Bentham Science Publishers

    Shaowu Zhang

  5. Identifying Drug-Target Interactions with Decision Templates

    Article • Current Protein and Peptide Science, March 2018, Bentham Science Publishers

    Shaowu Zhang

  6. Computational Methods for Predicting ncRNA-protein Interactions

    Article • Medicinal Chemistry, August 2017, Bentham Science Publishers

    Shaowu Zhang

  7. Some Remarks on Prediction of Drug-Target Interaction with Network Models

    Article • Current Topics in Medicinal Chemistry, July 2017, Bentham Science Publishers

    Shaowu Zhang

  8. Gene Prediction in Metagenomic Fragments with Deep Learning

    Article • BioMed Research International, January 2017, Hindawi Publishing Corporation

    Shaowu Zhang

  9. Some Remarks on Prediction of Protein-Protein Interaction with Machine Learning

    Article • Medicinal Chemistry, March 2015, Bentham Science Publishers

    Shaowu Zhang

  10. Decomposition of RNA methylome reveals co-methylation patterns induced by latent enzymatic regulators of the epitranscriptome

    Article • Molecular BioSystems, January 2015, Royal Society of Chemistry

    Shaowu Zhang

  11. lncRNA-MFDL: identification of human long non-coding RNAs by fusing multiple features and using deep learning

    Article • Molecular BioSystems, January 2015, Royal Society of Chemistry

    Shaowu Zhang

  12. MtHc: a motif-based hierarchical method for clustering massive 16S rRNA sequences into OTUs

    Article • Molecular BioSystems, January 2015, Royal Society of Chemistry

    Shaowu Zhang

  13. Prioritization of candidate disease genes by enlarging the seed set and fusing information of the network topology and gene expression

    Article • Molecular BioSystems, January 2014, Royal Society of Chemistry

    Shaowu Zhang