All Stories

  1. Engineering microdeletions and microduplications by targeting segmental duplications with CRISPR

    Article • Nature Neuroscience, February 2016, Nature

    Dr Serkan Erdin, Dr Mustafa Sahin

  2. Genes that Affect Brain Structure and Function Identified by Rare Variant Analyses of Mendelian Neurologic Disease

    Article • Neuron, November 2015, Elsevier

    Dr Serkan Erdin, VEHAP TOPÇU, ozlem sezer

  3. Rare variants in the notch signaling pathway describe a novel type of autosomal recessive Klippel-Feil syndrome

    Article • American Journal of Medical Genetics Part A, August 2015, Wiley

    Dr Serkan Erdin

  4. Whole-Exome Sequencing Identifies HomozygousGPR161Mutation in a Family with Pituitary Stalk Interruption Syndrome

    Article • The Journal of Clinical Endocrinology & Metabolism, January 2015, Endocrine Society

    Dr Serkan Erdin, Kursat Oguz Yaykasli

  5. CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors

    Article • Proceedings of the National Academy of Sciences, October 2014, Proceedings of the National Academy of Sciences

    Dr Serkan Erdin

  6. Low Incidence of Off-Target Mutations in Individual CRISPR-Cas9 and TALEN Targeted Human Stem Cell Clones Detected by Whole-Genome Sequencing

    Article • Cell Stem Cell, August 2014, Elsevier

    Dr Serkan Erdin

  7. Low Incidence of Off-Target Mutations in Individual CRISPR-Cas9 and TALEN Targeted Human Stem Cell Clones Detected by Whole-Genome Sequencing

    Article • Cell Stem Cell, July 2014, Elsevier

    Dr Serkan Erdin

  8. Transcriptional Consequences of 16p11.2 Deletion and Duplication in Mouse Cortex and Multiplex Autism Families

    Article • The American Journal of Human Genetics, June 2014, Elsevier

    Dr Serkan Erdin

  9. Human CLP1 Mutations Alter tRNA Biogenesis, Affecting Both Peripheral and Central Nervous System Function

    Article • Cell, April 2014, Elsevier

    Dr Serkan Erdin

  10. Prediction and experimental validation of enzyme substrate specificity in protein structures

    Article • Proceedings of the National Academy of Sciences, October 2013, Proceedings of the National Academy of Sciences

    Dr Serkan Erdin

  11. Accounting for epistatic interactions improves the functional analysis of protein structures

    Article • Bioinformatics, September 2013, Oxford University Press (OUP)

    Dr Serkan Erdin

  12. A large-scale evaluation of computational protein function prediction

    Article • Nature Methods, January 2013, Nature

    Karin M Verspoor, Dr Serkan Erdin

  13. Function prediction from networks of local evolutionary similarity in protein structure

    Article • BMC Bioinformatics, January 2013, Springer Science + Business Media

    Dr Serkan Erdin

  14. The use of evolutionary patterns in protein annotation

    Article • Current Opinion in Structural Biology, June 2012, Elsevier

    Dr Serkan Erdin

  15. A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB

    Article • The EMBO Journal, February 2012, Wiley

    Dr Serkan Erdin

  16. NetWalker: a contextual network analysis tool for functional genomics

    Article • BMC Genomics, January 2012, Springer Science + Business Media

    Dr Serkan Erdin

  17. Evolutionary Trace for Prediction and Redesign of Protein Functional Sites

    Article • November 2011, Springer Science + Business Media

    Dr Serkan Erdin

  18. Protein function prediction: towards integration of similarity metrics

    Article • Current Opinion in Structural Biology, April 2011, Elsevier

    Dr Serkan Erdin

  19. Accurate Protein Structure Annotation through Competitive Diffusion of Enzymatic Functions over a Network of Local Evolutionary Similarities

    Article • PLoS ONE, December 2010, PLOS

    Dr Serkan Erdin

  20. Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation

    Article • Protein Science, April 2010, Wiley

    Dr Serkan Erdin

  21. Evolutionary Trace Annotation of Protein Function in the Structural Proteome

    Article • Journal of Molecular Biology, March 2010, Elsevier

    Dr Serkan Erdin

  22. De-Orphaning the Structural Proteome through Reciprocal Comparison of Evolutionarily Important Structural Features

    Article • PLoS ONE, May 2008, PLOS

    Dr Serkan Erdin

  23. Ab initio studies of tetracyanoethylene-based organic magnets

    Article • Physica B Condensed Matter, May 2008, Elsevier

    Dr Serkan Erdin

  24. Double-exchange model for molecule-based magnets

    Article • Physics Letters A, January 2008, Elsevier

    Dr Serkan Erdin

  25. Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

    Article • BMC Bioinformatics, January 2008, Springer Science + Business Media

    Dr Serkan Erdin, Professor Lydia E Kavraki

  26. Self-consistent tight binding molecular dynamics study of TiO2 nanoclusters in water

    Article • Journal of Electroanalytical Chemistry, September 2007, Elsevier

    Dr Serkan Erdin

  27. Photoinduced Magnetism Caused by Charge-Transfer Excitations in Tetracyanoethylene-Based Organic Magnets

    Article • Physical Review Letters, December 2006, American Physical Society (APS)

    Dr Serkan Erdin

  28. Vortex chain states in a ferromagnet/superconductor bilayer

    Article • Physical Review B, June 2006, American Physical Society (APS)

    Dr Serkan Erdin

  29. London study of vortex states in a superconducting film due to a magnetic dot

    Article • Physical Review B, July 2005, American Physical Society (APS)

    Dr Serkan Erdin

  30. Self-consistent tight-binding study of low-index titanium surfaces

    Article • Physical Review B, July 2005, American Physical Society (APS)

    Dr Serkan Erdin

  31. Vortex penetration in magnetic superconducting heterostructures

    Article • Physical Review B, June 2004, American Physical Society (APS)

    Dr Serkan Erdin

  32. Symmetry violation in a superconducting film with a square array of ferromagnetic dots

    Article • Physica C Superconductivity, August 2003, Elsevier

    Dr Serkan Erdin

  33. Interaction of mesoscopic magnetic textures with superconductors

    Article • July 2002, American Physical Society (APS)

    Dr Serkan Erdin

  34. Topological Textures in a Ferromagnet-Superconductor Bilayer

    Article • Physical Review Letters, December 2001, American Physical Society (APS)

    Dr Serkan Erdin

  35. OSCILLATIONS OF SPHERICAL AND CYLINDRICAL SHELLS

    Article • International Journal of Modern Physics B, September 2001, World Scientific Pub Co Pte Lt

    Dr Serkan Erdin

  36. Heterogeneous Magnetic Superconducting Systems

    Article • Springer Science + Business Media

    Dr Serkan Erdin