Professor, Biological Sciences
My co-authors include
Dr Robert A Edwards
Prof. Jonathan A. Eisen
Moderate Exercise Has Limited but Distinguishable Effects on the Mouse Microbiome
The Impact of Exclusive Enteral Nutrition (EEN) on the Gut Microbiome in Crohn’s Diseas...
Microbiome Helper: a Custom and Streamlined Workflow for Microbiome Research
Discovery of an expanded set of avian leukosis subgroup E proviruses in chickens using ...
Genomic Analysis of a Serotype 5Streptococcus pneumoniaeOutbreak in British Columbia, C...
Canadian Journal of Infectious Diseases and Medical Microbiology
GenomeD3Plot: a library for rich, interactive visualizations of genomic data in web app...
IslandViewer 3: more flexible, interactive genomic island discovery, visualization and ...
Nucleic Acids Research
Fecal microbes, short chain fatty acids, and colorectal cancer across racial/ethnic groups
World Journal of Gastroenterology
Microbial shifts in the aging mouse gut
Which is more important for classifying microbial communities: who’s there or what they...
The ISME Journal
Interactions in the microbiome: communities of organisms and communities of genes
FEMS Microbiology Reviews
Predictive functional profiling of microbial communities using 16S rRNA marker gene seq...
GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradien...
IslandViewer update: improved genomic island discovery and visualization
Nucleic Acids Research
Sifting through genomes with iterative-sequence clustering produces a large, phylogenet...
Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factoriz...
Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux
MicrobeDB: a locally maintainable database of microbial genomic sequences
Human Microbiome: A Genetic Bazaar for Microbes?
Detecting genomic islands using bioinformatics approaches
Nature Reviews Microbiology
BioTorrents: A File Sharing Service for Scientific Data
The Association of Virulence Factors with Genomic Islands
Bioinformatic detection of horizontally transferred DNA in bacterial genomes
F1000 Biology Reports
IslandViewer: an integrated interface for computational identification and visualizatio...
Newly introduced genomic prophage islands are critical determinants of in vivo competit...
MOBILE GENETIC ELEMENTS AND THEIR PREDICTION
Evaluation of genomic island predictors using a comparative genomics approach
Parent genes of retrotransposition-generated gene duplicates in Drosophila melanogaster...
Data Standards for Flow Cytometry
OMICS A Journal of Integrative Biology
3D live-wire-based semi-automatic segmentation of medical images
Color lesion boundary detection using live wire