All Stories

  1. Synteny Enabled Upgrade of the Galapagos Giant Tortoise Genome Improves Inferences of Runs of Homozygosity

    Article • Ecology and Evolution, April 2025, Wiley

    Joshua M Miller

  2. Leveraging genomic load estimates to optimize captive breeding programmes

    Article • Molecular Ecology Resources, August 2024, Wiley

    Joshua M Miller

  3. Development of an 8K SNP chip to assess adaptive diversity and hybridization in polar bears

    Article • Conservation Genetics Resources, June 2024, Springer Science + Business Media

    Dr. René Michael Malenfant, Joshua M Miller

  4. Galapagos giant tortoise trafficking case demonstrates the utility and applications of long‐term comprehensive genetic monitoring

    Article • Animal Conservation, April 2023, Wiley

    Joshua M Miller

  5. A roadmap to robust discriminant analysis of principal components

    Article • Molecular Ecology Resources, November 2022, Wiley

    Joshua M Miller

  6. Ewe are what ewe wear: bigger horns, better ewes and the potential consequence of trophy hunting on female fitness in bighorn sheep

    Article • Proceedings of the Royal Society B Biological Sciences, March 2022, Royal Society Publishing

    Joshua M Miller

  7. A new lineage of Galapagos giant tortoises identified from museum samples

    Article • Heredity, February 2022, Springer Science + Business Media

    Scott Glaberman, Joshua M Miller

  8. Linking genetic, morphological, and behavioural divergence between inland island and mainland deer mice

    Article • Heredity, December 2021, Springer Science + Business Media

    Joshua M Miller

  9. Ancient hybridization patterns between bighorn and thinhorn sheep

    Article • Molecular Ecology, November 2021, Wiley

    Joshua M Miller

  10. The crucial role of genome-wide genetic variation in conservation

    Article • Proceedings of the National Academy of Sciences, November 2021, Proceedings of the National Academy of Sciences

    Joshua M Miller

  11. Evaluation of novel genomic markers for pedigree construction in an isolated population of Weddell Seals (Leptonychotes weddellii) at White Island, Antarctica

    Article • Conservation Genetics Resources, September 2021, Springer Science + Business Media

    Joshua M Miller

  12. A Phylogeographic Contact Zone for Arctic Grayling in Alberta, Canada

    Article • North American Journal of Fisheries Management, September 2021, Oxford University Press (OUP)

    Joshua M Miller

  13. Colonization history of Galapagos giant tortoises: Insights from mitogenomes support the progression rule

    Article • Journal of Zoological Systematics & Evolutionary Research, September 2020, Wiley

    Scott Glaberman, Joshua M Miller

  14. The influence of a priori grouping on inference of genetic clusters: simulation study and literature review of the DAPC method

    Article • Heredity, August 2020, Springer Science + Business Media

    Joshua M Miller

  15. Research–management partnerships: An opportunity to integrate genetics in conservation actions

    Article • Conservation Science and Practice, July 2020, Wiley

    Joshua M Miller

  16. The genetic basis of animal behavioural diversity in natural populations

    Article • Molecular Ecology, May 2020, Wiley

    Joshua M Miller

  17. Confidently identifying the correct K value using the Δ K method: when does K = 2?

    Article • Molecular Ecology, February 2020, Wiley

    Dr. René Michael Malenfant, Joshua M Miller

  18. Seeking compromise across competing goals in conservation translocations: The case of the ‘extinct’ Floreana Island Galapagos giant tortoise

    Article • Journal of Applied Ecology, October 2019, Wiley

    Joshua M Miller

  19. Genetically informed captive breeding of hybrids of an extinct species of Galapagos tortoise

    Article • Conservation Biology, June 2019, Wiley

    Joshua M Miller

  20. Giant tortoise genomes provide insights into longevity and age-related disease

    Article • Nature Ecology & Evolution, December 2018, Springer Science + Business Media

    Joshua M Miller, Scott Glaberman

  21. Population genomics through time provides insights into the consequences of decline and rapid demographic recovery through head-starting in a Galapagos giant tortoise

    Article • Evolutionary Applications, July 2018, Wiley

    Joshua M Miller

  22. Genome-Wide Assessment of Diversity and Divergence Among Extant Galapagos Giant Tortoise Species

    Article • Journal of Heredity, July 2018, Oxford University Press (OUP)

    Joshua M Miller

  23. Temporal Mitogenomics of the Galapagos Giant Tortoise from Pinzón Reveals Potential Biases in Population Genetic Inference

    Article • Journal of Heredity, April 2018, Oxford University Press (OUP)

    Joshua M Miller

  24. From transects to transcripts: Teasing apart the architecture of reproductive isolation

    Article • Molecular Ecology, March 2018, Wiley

    Joshua M Miller

  25. Genetic Pedigree Analysis of the Pilot Breeding Program for the Rediscovered Galapagos Giant Tortoise from Floreana Island

    Article • Journal of Heredity, February 2018, Oxford University Press (OUP)

    Joshua M Miller

  26. Theory, practice, and conservation in the age of genomics: The Galápagos giant tortoise as a case study

    Article • Evolutionary Applications, October 2017, Wiley

    Joshua M Miller

  27. Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provide Founders for Species Restoration Program

    Article • Scientific Reports, September 2017, Nature

    Joshua M Miller

  28. The K = 2 conundrum

    Article • Molecular Ecology, June 2017, Wiley

    Joshua M Miller, Dr. René Michael Malenfant

  29. Assessing polar bear ( Ursus maritimus ) population structure in the Hudson Bay region using SNP s

    Article • Ecology and Evolution, October 2016, Wiley

    Dr. René Michael Malenfant, Joshua M Miller

  30. Interspecies hybridization in the conservation toolbox: response to Kovach et al. (2016)

    Article • Conservation Biology, February 2016, Wiley

    Joshua M Miller

  31. Population structure and dispersal of wolves in the Canadian Rocky Mountains

    Article • Journal of Mammalogy, February 2016, Oxford University Press (OUP)

    Joshua M Miller

  32. Cross-Species Application of SNP Chips is Not Suitable for Identifying Runs of Homozygosity

    Article • Journal of Heredity, January 2016, Oxford University Press (OUP)

    Joshua M Miller

  33. Adaptive introgression as a resource for management and genetic conservation in a changing climate

    Article • Conservation Biology, October 2015, Wiley

    Joshua M Miller

  34. Temporal dynamics of linkage disequilibrium in two populations of bighorn sheep

    Article • Ecology and Evolution, July 2015, Wiley

    Dr. René Michael Malenfant, Joshua M Miller

  35. Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis)

    Article • BMC Genomics, May 2015, Springer Science + Business Media

    Joshua M Miller

  36. Assessment of identity disequilibrium and its relation to empirical heterozygosity fitness correlations: a meta-analysis

    Article • Molecular Ecology, March 2014, Wiley

    Joshua M Miller

  37. Estimating genome-wide heterozygosity: effects of demographic history and marker type

    Article • Heredity, October 2013, Springer Science + Business Media

    Dr. René Michael Malenfant, Joshua M Miller

  38. Genomic Resources Notes accepted 1 April 2013-31 May 2013

    Article • Molecular Ecology Resources, July 2013, Wiley

    Joshua M Miller

  39. Consistent divergence times and allele sharing measured from cross‐species application of SNP chips developed for three domestic species

    Article • Molecular Ecology Resources, September 2012, Wiley

    Mr John C McEwan, Joshua M Miller

  40. Genomic consequences of genetic rescue in an insular population of bighorn sheep (Ovis canadensis)

    Article • Molecular Ecology, January 2012, Wiley

    Joshua M Miller

  41. Short Reads, Circular Genome: Skimming SOLiD Sequence to Construct the Bighorn Sheep Mitochondrial Genome

    Article • Journal of Heredity, September 2011, Oxford University Press (OUP)

    Dr. René Michael Malenfant, Joshua M Miller

  42. Phylogeographic analysis of nuclear and mtDNA supports subspecies designations in the ostrich (Struthio camelus)

    Article • Conservation Genetics, October 2010, Springer Science + Business Media

    Joshua M Miller

  43. Long-term isolation of a highly mobile seabird on the Galapagos

    Article • Proceedings of the Royal Society B Biological Sciences, September 2010, Royal Society Publishing

    Dr Frank Hailer, Joshua M Miller

  44. A genome-wide set of SNPs detects population substructure and long range linkage disequilibrium in wild sheep

    Article • Molecular Ecology Resources, September 2010, Wiley

    Joshua M Miller

  45. Genetic linkage map of a wild genome: genomic structure, recombination and sexual dimorphism in bighorn sheep

    Article • BMC Genomics, January 2010, Springer Science + Business Media

    Joshua M Miller