All Stories

  1. Stepwise Evolution and Epistatic Interaction of Driver Mutations from Endometrial Hyperplasia to Carcinoma
  2. Signal, noise, and bias in phylogenetic inference: potential and limits to the resolution of phylogenetic trees in the phylogenomic era
  3. Data from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  4. Figure S1 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  5. Figure S10 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  6. Figure S11 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  7. Figure S12 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  8. Figure S13 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  9. Figure S14 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  10. Figure S15 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  11. Figure S16 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  12. Figure S2 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  13. Figure S3 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  14. Figure S4 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  15. Figure S5 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  16. Figure S6 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  17. Figure S7 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  18. Figure S8 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  19. Figure S9 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  20. Table S1 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  21. Table S2 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  22. Table S3 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  23. Table S4 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  24. Table S5 from Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  25. Germline Predisposition to Oncogenic Alkylating Damage in Colorectal Cancer
  26. Figure S1 from Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  27. KRAS G12C-associated immunotherapy benefit in NSCLC is substantially mediated by tobacco-induced tumor mutation burden, not allele-specific effects
  28. Deconvolving mutation and selection reveals stage-specific drivers of thyroid cancer
  29. Germline predisposition to oncogenic alkylating damage in colorectal cancer
  30. Rates of Evolution of Developmental Changes in Gene Expression in Sordariomycetes
  31. Precision projections of the delay of resistance mutations in non-small cell lung cancer via suppression of APOBEC
  32. Comparative transcriptional analysis reveals gene expression changes in spore germination of opportunistic pathogenic fungi
  33. Entrenchment and contingency in neutral protein evolution with epistasis
  34. Transcription factor-dependent regulatory networks of sexual reproduction in Fusarium graminearum
  35. Tobacco smoke alters the trajectory of lung adenocarcinoma evolution via effects on somatic selection and epistasis
  36. Optimal Annual COVID-19 Vaccine Boosting Dates Following Previous Booster Vaccination or Breakthrough Infection
  37. COVID-19 prevention with alternate vaccine boosting frequencies for multiple-sclerosis patients undergoing therapy with beta-interferon, dimethyl fumarate, natalizumab, or teriflunomide
  38. Sufficient COVID-19 quarantine and testing on international travelers to forestall cross-border transmission after China's removal of the zero-COVID policy in early 2023
  39. Optimal annual COVID-19 vaccine boosting dates following previous booster vaccination or breakthrough infection
  40. Rare Drivers at Low Prevalence with High Cancer Effects in T-Cell and B-Cell Pediatric Acute Lymphoblastic Leukemia
  41. Seasonality of endemic COVID-19
  42. Pairwise and higher-order epistatic effects among somatic cancer mutations across oncogenesis
  43. Early NOTCH1 mutation is positively selected but epistatically suppresses evolution of later esophageal squamous-cell carcinoma drivers
  44. Sufficient COVID-19 quarantine and testing on international travelers from China
  45. Origins of lineage‐specific elements via gene duplication, relocation, and regional rearrangement in Neurospora crassa
  46. Infection with alternate frequencies of SARS-CoV-2 vaccine boosting for patients undergoing antineoplastic cancer treatments
  47. Purifying selection and adaptive evolution proximate to the zoonosis of SARS-CoV-1 and SARS-CoV-2
  48. Tracing the evolution of single-cell cancer 3D genomes: an atlas for cancer gene discovery
  49. Origins of lineage-specific elements via gene duplication, relocation, and regional rearrangement in Neurospora crassa
  50. Infection by SARS-CoV-2 with alternate frequencies of mRNA vaccine boosting for patients undergoing antineoplastic treatment for cancer
  51. The “evol” is in the details: a rummage-region model for the origins of lineage-specific elements via gene duplication, relocation, and regional rearrangement in Neurospora crassa
  52. Data from Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  53. Data from Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  54. Figure S1 from Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  55. Figure S1 from Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  56. Infection by SARS‐CoV‐2 with alternate frequencies of mRNA vaccine boosting
  57. Jot: guiding journal selection with suitability metrics
  58. Estimation of Neutral Mutation Rates and Quantification of Somatic Variant Selection Using cancereffectsizeR
  59. In Response to “De Novo KRAS G12C-Mutant SCLC: A Case Report”
  60. Not only mutations but also tumorigenesis can be substantially attributed to DNA damage from reactive oxygen species in RUNX1::RUNX1T1-fusion-positive acute myeloid leukemia
  61. The durability of natural infection and vaccine-induced immunity against future infection by SARS-CoV-2
  62. Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes
  63. Attribution of Cancer Origins to Endogenous, Exogenous, and Preventable Mutational Processes
  64. Cancer Relevance of Human Genes
  65. Heavy mutagenesis by tobacco leads to lung adenocarcinoma tumors with KRAS G12 mutations other than G12D, leading KRAS G12D tumors—on average—to exhibit a lower mutation burden
  66. Quarantine and testing strategies to ameliorate transmission due to travel during the COVID-19 pandemic: a modelling study
  67. Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
  68. Premetastatic shifts of endogenous and exogenous mutational processes support consolidative therapy in EGFR-driven lung adenocarcinoma
  69. Projecting the seasonality of endemic COVID-19
  70. Pairwise and higher-order epistatic effects among somatic cancer mutations across oncogenesis
  71. The Prognostic Value of an RT-PCR Test for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Is Contingent on Timing across Disease Time Course in addition to Assay Sensitivity
  72. The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study
  73. The somatic molecular evolution of cancer: Mutation, selection, and epistasis
  74. Comparative analyses of FDA EUA-approved rapid antigen tests and RT-PCR for COVID-19 quarantine and surveillance-based isolation
  75. Mechanistic basis of post-treatment control of SIV after anti-α4β7 antibody therapy
  76. Environmental and sex-specific molecular signatures of glioma causation
  77. Clinically relevant shifts in endogenous and exogenous mutational processes proximate to metastasis support local consolidative treatment in EGFR-driven non-small cell lung cancer
  78. Quarantine and testing strategies to ameliorate transmission due to travel during the COVID-19 pandemic: a modelling study
  79. Identifying modules of cooperating cancer drivers
  80. Cancer relevance of human genes
  81. Optimal COVID-19 quarantine and testing strategies
  82. Chemsearch: collaborative compound libraries with structure-aware browsing
  83. Comparative Genomics within and across Bilaterians Illuminates the Evolutionary History of ALK and LTK Proto-Oncogene Origination and Diversification
  84. Optimal COVID-19 quarantine and testing strategies
  85. Attribution of Cancer Origins to Endogenous, Exogenous, and Actionable Mutational Processes
  86. Identifying Modules of Cooperating Cancer Drivers
  87. Non-Coding Mutations in Urothelial Bladder Cancer: Biological and Clinical Relevance and Potential Utility as Biomarkers
  88. Dogs and pigs are transport hosts of Necator americanus: Molecular evidence for a zoonotic mechanism of human hookworm transmission in Ghana
  89. Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden
  90. Unmatched Level of Molecular Convergence among Deeply Divergent Complex Multicellular Fungi
  91. Transfer RNA methyltransferase gene NSUN2 mRNA expression modifies the effect of T cell activation score on patient survival in head and neck squamous carcinoma
  92. Re: Ming-Jun Shi, Xiang-Yu Meng, Philippe Lamy, et al. APOBEC-mediated Mutagenesis as a Likely Cause of FGFR3 S249C Mutation Over-representation in Bladder Cancer. Eur Urol 2019;76:9–13
  93. Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum
  94. Molecular Biology and Evolution of Cancer: From Discovery to Action
  95. Evolutionary analyses guide selection of model systems to investigate proto-oncogene function in ALK and LTK
  96. Modelling microbial infection to address global health challenges
  97. The landscape of novel and complementary targets for immunotherapy: an analysis of gene expression in the tumor microenvironment
  98. GEM-NET: Lessons in Multi-Institution Teamwork Using Collaboration Software
  99. Identifying Combinations of Cancer Drivers in Individual Patients
  100. A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes
  101. Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum
  102. Combined Aurora Kinase A (AURKA) and WEE1 Inhibition Demonstrates Synergistic Antitumor Effect in Squamous Cell Carcinoma of the Head and Neck
  103. Implementation of Syringe Services Programs to Prevent Rapid Human Immunodeficiency Virus Transmission in Rural Counties in the United States: A Modeling Study
  104. Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa
  105. Unmatched level of molecular convergence among deeply divergent complex multicellular fungi
  106. Wagging the long tail of drivers of prostate cancer
  107. APOBEC-induced mutations and their cancer effect size in head and neck squamous cell carcinoma
  108. Modeling Approaches Toward Understanding Infectious Disease Transmission
  109. Effect Sizes of Somatic Mutations in Cancer
  110. The critical importance of retention in HIV prevention
  111. Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development
  112. Potential effectiveness of long-acting injectable pre-exposure prophylaxis for HIV prevention in men who have sex with men: a modelling study
  113. Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
  114. Optimal Rates for Phylogenetic Inference and Experimental Design in the Era of Genome-Scale Data Sets
  115. Genomic Comparison Among Global Isolates of L. interrogans Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel
  116. Neutral Theory and the Somatic Evolution of Cancer
  117. Analysis of mutation, selection, and epistasis: an informed approach to cancer clinical trials
  118. Neutral Theory and the Somatic Evolution of Cancer
  119. CDKN2A Copy Number Loss Is an Independent Prognostic Factor in HPV-Negative Head and Neck Squamous Cell Carcinoma
  120. The Cancer Tree
  121. Primary hepatic neuroendocrine carcinoma: report of two cases and literature review
  122. Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic Leptospira
  123. Sexual stage-induced long noncoding RNAs in the filamentous fungus Fusarium graminearum
  124. Heterogeneity and mutation in KRAS and associated oncogenes: evaluating the potential for the evolution of resistance to targeting of KRAS G12C
  125. Somatic evolutionary timings of driver mutations
  126. how fungi may sense light and oxygen and adjust their behaviors
  127. Effect sizes of somatic mutations in cancer
  128. The Moran coalescent in a discrete one-dimensional spatial model
  129. Distributions of Mutational Effects and the Estimation of Directional Selection in Divergent Lineages ofArabidopsis thaliana
  130. Detection of Regional Variation in Selection Intensity within Protein-Coding Genes Using DNA Sequence Polymorphism and Divergence
  131. The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi
  132. The likelihood of heterogeneity or additional mutation in KRAS or associated oncogenes to compromise targeting of oncogenic KRAS G12C
  133. New insights on the sister lineage of percomorph fishes with an anchored hybrid enrichment dataset
  134. Radiation-Specific Clinical Data Should Be Included in Existing Large-Scale Genomic Datasets
  135. PhyloOncology: Understanding cancer through phylogenetic analysis
  136. Oncogenes without a neighboring tumor-suppressor gene are more prone to amplification
  137. A working model of the deep relationships of diverse modern human genetic lineages outside of Africa
  138. Mutation profiles in early-stage lung squamous cell carcinoma with clinical follow-up and correlation with markers of immune function
  139. Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma with fully annotated clinical follow-up
  140. Maximizing Power in Phylogenetics and Phylogenomics: A Perspective Illuminated by Fungal Big Data
  141. Preface
  142. One Health approach to cost-effective rabies control in India
  143. PhyInformR: phylogenetic experimental design and phylogenomic data exploration in R
  144. Vaccination strategies against respiratory syncytial virus
  145. Climatic and evolutionary drivers of phase shifts in the plague epidemics of colonial India
  146. PathScore: a web tool for identifying altered pathways in cancer data
  147. PathScore: a web tool for identifying altered pathways in cancer data
  148. Cost-effectiveness of next-generation vaccines: The case of pertussis
  149. A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
  150. Cost-Effectiveness of Pertussis Vaccination During Pregnancy in the United States
  151. Retrospective Analysis of the 2014–2015 Ebola Epidemic in Liberia
  152. A traffic light for fungal sex
  153. Determinants of Human African Trypanosomiasis Elimination via Paratransgenesis
  154. Early and multiple origins of metastatic lineages within primary tumors
  155. Optimizing age of cytomegalovirus screening and vaccination to avert congenital disease in the US
  156. Quantitative analyses and modelling to support achievement of the 2020 goals for nine neglected tropical diseases
  157. The Impact of Enhanced Screening and Treatment on Hepatitis C in the United States
  158. Impact of bed capacity on spatiotemporal shifts in Ebola transmission
  159. Inferring the Origin of Metastases from Cancer Phylogenies
  160. Genomic and gene-expression comparisons among phage-resistant type-IV pilus mutants of Pseudomonas syringae pathovar phaseolicola
  161. Solving the ecological puzzle of mycorrhizal associations using data from annotated collections and environmental samples – an example of saddle fungi
  162. Correction: Harnessing Case Isolation and Ring Vaccination to Control Ebola
  163. Harnessing Case Isolation and Ring Vaccination to Control Ebola
  164. Gene Expression Evolves under a House-of-Cards Model of Stabilizing Selection
  165. Under-reporting and case fatality estimates for emerging epidemics
  166. H-CLAP: hierarchical clustering within a linear array with an application in genetics
  167. Epidemiological and Viral Genomic Sequence Analysis of the 2014 Ebola Outbreak Reveals Clustered Transmission
  168. The peopling of the African continent and the diaspora into the new world
  169. Strategies for containing Ebola in West Africa
  170. Neural Gene Expression Profiles and Androgen Levels Underlie Alternative Reproductive Tactics in the Ocellated Wrasse,Symphodus ocellatus
  171. Gene Expression Differences among Three Neurospora Species Reveal Genes Required for Sexual Reproduction in Neurospora crassa
  172. Genome-Wide Characterization of Light-Regulated Genes inNeurospora crassa
  173. Phylogenetic informativeness reconciles ray-finned fish molecular divergence times
  174. The impact of incorporating molecular evolutionary model into predictions of phylogenetic signal and noise
  175. Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy
  176. Detecting rare gene transfer events in bacterial populations
  177. Optimized primers and other critical conditions for efficient fusion PCR to generate knockout vectors in filamentous fungi.
  178. Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa
  179. Phylogenetic and phylogenomic overview of the Polyporales
  180. Potential Cost-Effectiveness of Schistosomiasis Treatment for Reducing HIV Transmission in Africa – The Case of Zimbabwean Women
  181. Sex-linked transcriptional divergence in the hermaphrodite fungus Neurospora tetrasperma
  182. Epidemiological mechanisms of genetic resistance to kuru
  183. AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification
  184. Optimal targeting of seasonal influenza vaccination toward younger ages is robust to parameter uncertainty
  185. Cost-effectiveness of a community-based intervention for reducing the transmission of Schistosoma haematobium and HIV in Africa
  186. Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection
  187. Evaluating Phylogenetic Informativeness as a Predictor of Phylogenetic Signal for Metazoan, Fungal, and Mammalian Phylogenomic Data Sets
  188. Response to: The relative utility of sequence divergence and phylogenetic informativeness profiling in phylogenetic study design
  189. Controlling Antimicrobial Resistance through Targeted, Vaccine-Induced Replacement of Strains
  190. Analyses of expressed sequence tags in Neurosporareveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi
  191. Potential for Rabies Control through Dog Vaccination in Wildlife-Abundant Communities of Tanzania
  192. Reevaluation of Epidemiological Data Demonstrates That It Is Consistent With Cross-Immunity Among Human Papillomavirus Types
  193. Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology
  194. Resampling QTL Effects in the QTL Sign Test Leads to Incongruous Sensitivity to Variance in Effect Size
  195. Sex-specific gene expression during asexual development of Neurospora crassa
  196. RBE controls microRNA164 expression to effect floral organogenesis
  197. Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa
  198. The influence of altruism on influenza vaccination decisions
  199. A Test for Selection Employing Quantitative Trait Locus and Mutation Accumulation Data
  200. Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance
  201. Phylogenetic Signal and Noise: Predicting the Power of a Data Set to Resolve Phylogeny
  202. Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations
  203. Abundant Gene-by-Environment Interactions in Gene Expression Reaction Norms to Copper within Saccharomyces cerevisiae
  204. Data Integration in Bioinformatics: Current Efforts and Challenges
  205. Phylogenetic informativeness profiling of 12 genes for 28 vertebrate taxa without divergence dates
  206. PhyDesign: an online application for profiling phylogenetic informativeness
  207. Tasting Soil Fungal Diversity with Earth Tongues: Phylogenetic Test of SATé Alignments for Environmental ITS Data
  208. SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae
  209. Taxon Sampling and the Optimal Rates of Evolution for Phylogenetic Inference
  210. Retrospective evidence for a biological cost of vancomycin resistance determinants in the absence of glycopeptide selective pressures
  211. Getting the Most Out of Your Fungal Microarray Data: Two Cost- and Time-Effective Methods
  212. Northern species of earth tongue genus Thuemenidium revisited, considering morphology, ecology and molecular phylogeny
  213. Multi-targeted priming for genome-wide gene expression assays
  214. LOX: inferring Level Of eXpression from diverse methods of census sequencing
  215. Identification of new molecular markers for assembling the eukaryotic tree of life
  216. Optimal Selection of Gene and Ingroup Taxon Sampling for Resolving Phylogenetic Relationships
  217. The filamentous fungal gene expression database (FFGED)
  218. Evolving gene expression: from G to E to G×E
  219. Evolution of Reproductive Morphology in Leaf Endophytes
  220. Maximum-Likelihood Model Averaging To Profile Clustering of Site Types across Discrete Linear Sequences
  221. Geoglossomycetes cl. nov., Geoglossales ord. nov. and taxa above class rank in the Ascomycota Tree of Life
  222. Maximum-Likelihood Model Averaging To Profile Clustering of Site Types across Discrete Linear Sequences
  223. Factors affecting the reversal of antimicrobial-drug resistance
  224. The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits
  225. Evolution of Reproductive Morphology in Leaf Endophytes
  226. Measuring Transcription Factor–Binding Site Turnover: A Maximum Likelihood Approach Using Phylogenies
  227. Article Commentary: Snapshots of Tree Space
  228. RNA extraction, probe preparation, and competitive hybridization for transcriptional profiling using Neurospora crassa long-oligomer DNA microarrays
  229. Bringing Web 2.0 to bioinformatics
  230. HCLS 2.0/3.0: Health care and life sciences data mashup using Web 2.0/3.0
  231. The Phylogenetic Informativeness of Nucleotide and Amino Acid Sequences for Reconstructing the Vertebrate Tree
  232. Sleuthing the difference a nucleotide can make
  233. Quantifying variation in gene expression
  234. Profiling Phylogenetic Informativeness
  235. Enabling a Community to Dissect an Organism: Overview of the Neurospora Functional Genomics Project
  236. Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi
  237. Population structure and gene evolution in Saccharomyces cerevisiae
  238. Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii
  239. Ecological and evolutionary genomics of Saccharomyces cerevisiae
  240. Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination
  241. Concerted Evolution in the Repeats of an Immunomodulating Cell Surface Protein, SOWgp, of the Human Pathogenic Fungi Coccidioides immitis and C. posadasii
  242. Horizontal gene transfer, genome innovation and evolution
  243. Designing Experiments Using Spotted Microarrays to Detect Gene Regulation Differences Within and Among Species
  244. A Bayesian method for analysing spotted microarray data
  245. Monitoring horizontal gene transfer
  246. Monitoring and modeling horizontal gene transfer
  247. Mitochondrial genome size variation in New World and Old World populations of Drosophila melanogaster
  248. Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels and spotted DNA microarrays
  249. Gene expression profiling in evolutionary genetics
  250. Multifactorial experimental design and the transitivity of ratios with spotted DNA microarrays
  251. Biodiversity: Exploring Values and Priorities in Conservation . By Dan L  Perlman and Glenn  Adelson. Oxford and Malden (Massachusetts): Blackwell Science. $49.95 (paper). ix + 182 p + 15 pl; ill.; index. ISBN: 0‐86542‐439‐X. 1997.
  252. Population Genetic Variation in Genome-Wide Gene Expression
  253. Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatments
  254. Pathway Processor: A Tool for Integrating Whole-Genome Expression Results into Metabolic Networks
  255. Manifold anomalies in gene expression in a vineyard isolate of Saccharomyces cerevisiae revealed by DNA microarray analysis
  256. The Kinetics of Transposable Element Autoregulation
  257. Solvent Accessibility and Purifying Selection Within Proteins of Escherichia coli and Salmonella enterica