All Stories

  1. Structure calculation, refinement and validation usingCcpNmr Analysis

    Article • Acta Crystallographica Section D Biological Crystallography, January 2015, International Union of Crystallography

    Professor Geerten W. Vuister

  2. Sulfonylurea receptors regulate the channel pore in ATP-sensitive potassium channels via an intersubunit salt bridge

    Article • Biochemical Journal, December 2014, Portland Press Ltd.

    Professor Geerten W. Vuister

  3. NMR-Based Modeling and Refinement of Protein 3D Structures

    Article • September 2014, Springer Science + Business Media

    Professor Geerten W. Vuister, Dr. Alexandre M.J.J. Bonvin

  4. Recommendations of the wwPDB NMR Validation Task Force

    Article • Structure, September 2013, Elsevier

    Professor Geerten W. Vuister

  5. An overview of tools for the validation of protein NMR structures

    Article • Journal of Biomolecular NMR, July 2013, Springer Science + Business Media

    Professor Geerten W. Vuister

  6. Structural analysis of calmodulin binding to ion channels demonstrates the role of its plasticity in regulation

    Article • Pflügers Archiv - European Journal of Physiology, April 2013, Springer Science + Business Media

    Professor Geerten W. Vuister

  7. WeNMR: Structural Biology on the Grid

    Article • Journal of Grid Computing, November 2012, Springer Science + Business Media

    Professor Geerten W. Vuister, Dr. Alexandre M.J.J. Bonvin

  8. Accurate Prediction of the Dynamical Changes within the Second PDZ Domain of PTP1e

    Article • PLoS Computational Biology, November 2012, PLOS

    Professor Geerten W. Vuister

  9. CING: an integrated residue-based structure validation program suite

    Article • Journal of Biomolecular NMR, September 2012, Springer Science + Business Media

    Professor Geerten W. Vuister

  10. NMR structure note: solution structure of Ca2+ binding domain 2B of the third isoform of the Na+/Ca2+ exchanger

    Article • Journal of Biomolecular NMR, July 2012, Springer Science + Business Media

    Professor Geerten W. Vuister

  11. Structural and dynamic aspects of Ca 2+ and Mg 2+ binding of the regulatory domains of the Na + /Ca 2+ exchanger

    Article • Biochemical Society Transactions, April 2012, Portland Press Ltd.

    Professor Geerten W. Vuister

  12. Overlapping transport and chaperone‐binding functions within a bacterial twin‐arginine signal peptide

    Article • Molecular Microbiology, February 2012, Wiley

    Professor Geerten W. Vuister, Prof Frank Sargent

  13. The TRPV5/6 calcium channels contain multiple calmodulin binding sites with differential binding properties

    Article • Journal of Structural and Functional Genomics, February 2012, Springer Science + Business Media

    Professor Geerten W. Vuister

  14. Blind Testing of Routine, Fully Automated Determination of Protein Structures from NMR Data

    Article • Structure, February 2012, Elsevier

    Professor Michele Vendruscolo, Professor Geerten W. Vuister, Dr. Alexandre M.J.J. Bonvin

  15. Gradient-enhanced heteronuclear correlation spectroscopy: Theory and experimental aspects

    Article • Journal of Magnetic Resonance, December 2011, Elsevier

    Professor Geerten W. Vuister

  16. NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDB

    Article • Nucleic Acids Research, December 2011, Oxford University Press (OUP)

    Professor Geerten W. Vuister

  17. Expression and purification of the C-terminal fragments of TRPV5/6 channels

    Article • Protein Expression and Purification, November 2011, Elsevier

    Professor Geerten W. Vuister

  18. The Second Ca 2+ -Binding Domain of NCX1 Binds Mg 2+ with High Affinity

    Article • Biochemistry, October 2011, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  19. Measurement of Structural Restraints

    Article • June 2011, Wiley

    Professor Geerten W. Vuister

  20. Molecular Mechanisms of Calmodulin Action on TRPV5 and Modulation by Parathyroid Hormone

    Article • Molecular and Cellular Biology, May 2011, ASM Journals

    Professor Geerten W. Vuister

  21. Traditional Biomolecular Structure Determination by NMR Spectroscopy Allows for Major Errors

    Article • April 2011, Taylor & Francis

    Professor Geerten W. Vuister

  22. Overview on the Use of NMR to Examine Protein Structure

    Article • April 2011, Wiley

    Professor Geerten W. Vuister

  23. Binding of calcium is sensed structurally and dynamically throughout the second calcium-binding domain of the sodium/calcium exchanger

    Article • Proteins Structure Function and Bioinformatics, February 2010, Wiley

    Professor Geerten W. Vuister

  24. A Cell-penetrating Peptide Derived from Human Lactoferrin with Conformation-dependent Uptake Efficiency

    Article • Journal of Biological Chemistry, October 2009, American Society for Biochemistry & Molecular Biology (ASBMB)

    Professor Geerten W. Vuister

  25. The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries

    Article • Journal of Biomolecular NMR, October 2009, Springer Science + Business Media

    Professor Geerten W. Vuister

  26. CASD-NMR: critical assessment of automated structure determination by NMR

    Article • Nature Methods, September 2009, Nature

    Professor Geerten W. Vuister, Dr. Alexandre M.J.J. Bonvin

  27. Ca 2+ regulation in the Na + /Ca 2+ exchanger features a dual electrostatic switch mechanism

    Article • Proceedings of the National Academy of Sciences, August 2009, Proceedings of the National Academy of Sciences

    Professor Geerten W. Vuister

  28. Structure and Dynamics of Ca2+-Binding Domain 1 of the Na+/Ca2+ Exchanger in the Presence and in the Absence of Ca2+

    Article • Journal of Molecular Biology, March 2008, Elsevier

    Professor Geerten W. Vuister

  29. An Allosteric Intramolecular PDZ−PDZ Interaction Modulates PTP-BL PDZ2 Binding Specificity †

    Article • Biochemistry, November 2007, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  30. Structural diversity in twin-arginine signal peptide-binding proteins

    Article • Proceedings of the National Academy of Sciences, October 2007, Proceedings of the National Academy of Sciences

    Professor Geerten W. Vuister, Prof Frank Sargent

  31. Structural Basis for Ca2+ Regulation in the Na+/Ca2+ Exchanger

    Article • Annals of the New York Academy of Sciences, February 2007, Wiley

    Professor Geerten W. Vuister

  32. A PDZ domain recapitulates a unifying mechanism for protein folding

    Article • Proceedings of the National Academy of Sciences, January 2007, Proceedings of the National Academy of Sciences

    Professor Geerten W. Vuister, Professor Michele Vendruscolo

  33. Demonstration of Long-Range Interactions in a PDZ Domain by NMR, Kinetics, and Protein Engineering

    Article • Structure, December 2006, Elsevier

    Professor Andrea Bellelli, Professor Geerten W. Vuister

  34. Role of Structural and Dynamical Plasticity in Sin3: The Free PAH2 Domain is a Folded Module in mSin3B

    Article • Journal of Molecular Biology, April 2006, Elsevier

    Professor Geerten W. Vuister

  35. Ca2+ Regulation in the Na+/Ca2+ Exchanger Involves Two Markedly Different Ca2+ Sensors

    Article • Molecular Cell, April 2006, Elsevier

    Professor Geerten W. Vuister

  36. CEESY:  Characterizing the Conformation of Unobservable Protein States

    Article • Journal of the American Chemical Society, March 2006, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  37. Traditional Biomolecular Structure Determination by NMR Spectroscopy Allows for Major Errors

    Article • PLoS Computational Biology, January 2006, PLOS

    Professor Geerten W. Vuister

  38. Definition of a New Information-Based Per-Residue Quality Parameter

    Article • Journal of Biomolecular NMR, October 2005, Springer Science + Business Media

    Professor Geerten W. Vuister

  39. Solution Structure of the Second PDZ Domain of the Neuronal Adaptor X11α and its Interaction with the C-terminal Peptide of the Human Copper Chaperone for Superoxide Dismutase

    Article • Journal of Biomolecular NMR, July 2005, Springer Science + Business Media

    Professor Geerten W. Vuister

  40. Kinetic folding mechanism of PDZ2 from PTP-BL

    Article • Protein Engineering Design and Selection, June 2005, Oxford University Press (OUP)

    Professor Geerten W. Vuister

  41. Traditional Biomolecular Structure Determination by NMR Spectroscopy Allows for Major Errors

    Article • PLoS Computational Biology, January 2005, PLOS

    Professor Geerten W. Vuister

  42. The interaction of PTP-BL PDZ domains with RIL: An enigmatic role for the RIL LIM domain

    Article • Molecular Biology Reports, January 2005, Springer Science + Business Media

    Professor Geerten W. Vuister

  43. Validation of protein structures derived by NMR spectroscopy

    Article • Progress in Nuclear Magnetic Resonance Spectroscopy, December 2004, Elsevier

    Professor Geerten W. Vuister

  44. Cold Shock Domain of the Human Y-Box Protein YB-1. Backbone Dynamics and Equilibrium between the Native State and a Partially Unfolded State †

    Article • Biochemistry, August 2004, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  45. DRESS: a database of REfined solution NMR structures

    Article • Proteins Structure Function and Bioinformatics, April 2004, Wiley

    Professor Geerten W. Vuister, Dr. Alexandre M.J.J. Bonvin

  46. A Closed Binding Pocket and Global Destabilization Modify the Binding Properties of an Alternatively Spliced Form of the Second PDZ Domain of PTP-BL

    Article • Structure, March 2004, Elsevier

    Professor Geerten W. Vuister

  47. Binding of the AVR4 Elicitor of Cladosporium fulvum to Chitotriose Units Is Facilitated by Positive Allosteric Protein-Protein Interactions: THE CHITIN-BINDING SITE OF AVR4 REPRESENTS A NOVEL BINDING SITE ON THE FOLDING SCAFFOLD SHARED BETWEEN THE INVE...

    Article • Journal of Biological Chemistry, February 2004, American Society for Biochemistry & Molecular Biology (ASBMB)

    Professor Geerten W. Vuister

  48. Concepts and tools for NMR restraint analysis and validation

    Article • Concepts in Magnetic Resonance, January 2004, Wiley

    Professor Geerten W. Vuister

  49. Extension of the Binding Motif of the Sin3 Interacting Domain of the Mad Family Proteins † , ‡

    Article • Biochemistry, January 2004, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  50. Quantitative Evaluation of Experimental NMR Restraints

    Article • Journal of the American Chemical Society, October 2003, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  51. Structural Analysis of an Epidermal Growth Factor/Transforming Growth Factor-α Chimera with Unique ErbB Binding Specificity

    Article • Journal of Biological Chemistry, July 2003, American Society for Biochemistry & Molecular Biology (ASBMB)

    Professor Geerten W. Vuister

  52. ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase

    Article • Nature Structural & Molecular Biology, May 2003, Springer Science + Business Media

    Professor Geerten W. Vuister

  53. A Two-Dimensional Artifact from Asynchronous Decoupling

    Article • Journal of Magnetic Resonance, June 2002, Elsevier

    Professor Geerten W. Vuister

  54. Structure, dynamics and binding characteristics of the second PDZ domain of PTP-BL

    Article • Journal of Molecular Biology, March 2002, Elsevier

    Professor Geerten W. Vuister

  55. The solution structure and DNA-binding properties of the cold-shock domain of the human Y-box protein YB-1

    Article • Journal of Molecular Biology, February 2002, Elsevier

    Professor Geerten W. Vuister

  56. The EH1 Domain of Eps15 Is Structurally Classified as a Member of the S100 Subclass of EF-Hand-Containing Proteins †

    Article • Biochemistry, August 1999, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  57. NMR Experiments for the Study of Photointermediates: Application to the Photoactive Yellow Protein

    Article • Journal of Magnetic Resonance, April 1999, Elsevier

    Professor Geerten W. Vuister

  58. Solution Structure and Backbone Dynamics of the Photoactive Yellow Protein † , ‡

    Article • Biochemistry, September 1998, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  59. Structural and dynamic changes of photoactive yellow protein during its photocycle in solution

    Article • Nature Structural Biology, July 1998, Springer Science + Business Media

    Professor Geerten W. Vuister

  60. Heteronuclear NMR Studies of the Combined Src Homology Domains 2 and 3 of pp60 c-Src:  Effects of Phosphopeptide Binding †

    Article • Biochemistry, November 1997, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  61. Quantitative Measurement of Relaxation Interference Effects between 1 H N CSA and 1 H− 15 N Dipolar Interaction:  Correlation with Secondary Structure

    Article • Journal of the American Chemical Society, September 1997, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  62. Determination of Amide Proton CSA in15N-Labeled Proteins Using1H CSA/15N–1H Dipolar and15N CSA/15N–1H Dipolar Cross-Correlation Rates

    Article • Journal of Magnetic Resonance, July 1997, Elsevier

    Professor Geerten W. Vuister

  63. Recent Developments in Protein NMR Spectroscopy

    Article • January 1996, Springer Science + Business Media

    Professor Geerten W. Vuister

  64. NMRPipe: A multidimensional spectral processing system based on UNIX pipes

    Article • Journal of Biomolecular NMR, November 1995, Springer Science + Business Media

    Professor Geerten W. Vuister

  65. Resonance assignment of methionine methyl groups and ?3angular information from long-range proton?carbon and carbon?carbon J correlation in a calmodulin?peptide complex

    Article • Journal of Biomolecular NMR, November 1994, Springer Science + Business Media

    Professor Geerten W. Vuister

  66. 2D and 3D NMR Study of Phenylalanine Residues in Proteins by Reverse Isotopic Labeling

    Article • Journal of the American Chemical Society, October 1994, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  67. An Efficient Triple-Resonance Experiment for Proton-Directed Sequential Backbone Assignment of Medium-Sized Proteins

    Article • Journal of Magnetic Resonance Series B, October 1994, Elsevier

    Professor Geerten W. Vuister

  68. Solution structure of the DNA-binding domain of Drosophila heat shock transcription factor

    Article • Nature Structural & Molecular Biology, September 1994, Springer Science + Business Media

    Professor Geerten W. Vuister

  69. The Impact of Direct Refinement against Three-Bond HN-CαH Coupling Constants on Protein Structure Determination by NMR

    Article • Journal of Magnetic Resonance Series B, May 1994, Elsevier

    Professor Geerten W. Vuister

  70. Measurement of four-bond HN-H? J-couplings in staphylococcal nuclease

    Article • Journal of Biomolecular NMR, March 1994, Springer Science + Business Media

    Professor Geerten W. Vuister

  71. [2] Measurement of homo- and heteronuclear J couplings from quantitative J correlation

    Article • January 1994, Elsevier

    Professor Geerten W. Vuister

  72. NMR evidence for similarities between the DNA-binding regions of Drosophila melanogaster heat shock factor and the helix-turn-helix and HNF-3/forkhead families of transcription factors

    Article • Biochemistry, January 1994, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  73. Measurement of Two- and Three-Bond Proton to Methyl-Carbon J Couplings in Proteins Uniformly Enriched with 13C

    Article • Journal of Magnetic Resonance Series B, October 1993, Elsevier

    Professor Geerten W. Vuister

  74. Computer-Assisted Assignment of Homonuclear 3D NMR Spectra of Proteins. Application to Pike Parvalbumin III

    Article • Journal of Magnetic Resonance Series B, October 1993, Elsevier

    Professor Geerten W. Vuister

  75. Quantitative J correlation: a new approach for measuring homonuclear three-bond J(HNH.alpha.) coupling constants in 15N-enriched proteins

    Article • Journal of the American Chemical Society, August 1993, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  76. Flexibility of the calmodulin central helix is key to its function.

    Article • Journal of Inorganic Biochemistry, July 1993, Elsevier

    Professor Geerten W. Vuister

  77. A simple and sensitive experiment for measurement of JCC couplings between backbone carbonyl and methyl carbons in isotopically enriched proteins

    Article • Journal of Biomolecular NMR, July 1993, Springer Science + Business Media

    Professor Geerten W. Vuister

  78. Measurement of three-bond nitrogen-carbon J couplings in proteins uniformly enriched in nitrogen-15 and carbon-13

    Article • Journal of the American Chemical Society, June 1993, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  79. Measurement of two- and three-bond 13C?1H J couplings to the C? carbons of leucine residues in staphylococcal nuclease

    Article • Journal of Biomolecular NMR, May 1993, Springer Science + Business Media

    Professor Geerten W. Vuister

  80. Increased Resolution and Improved Spectral Quality in Four-Dimensional 13C/13C-Separated HMQC-NOESY-HMQC Spectra Using Pulsed Field Gradients

    Article • Journal of Magnetic Resonance Series B, April 1993, Elsevier

    Professor Geerten W. Vuister

  81. The use of 1JC?H? coupling constants as a probe for protein backbone conformation

    Article • Journal of Biomolecular NMR, January 1993, Springer Science + Business Media

    Professor Geerten W. Vuister

  82. An empirical correlation between 1JC.alpha.H.alpha. and protein backbone conformation

    Article • Journal of the American Chemical Society, November 1992, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  83. Gradient-enhanced heteronuclear correlation spectroscopy. Theory and experimental aspects

    Article • Journal of Magnetic Resonance (1969), November 1992, Elsevier

    Professor Geerten W. Vuister

  84. Gradient-enhanced multiple-quantum filter (ge-MQF). A simple way to obtain single-scan phase-sensitive HMQC spectra

    Article • Journal of Magnetic Resonance (1969), October 1992, Elsevier

    Professor Geerten W. Vuister

  85. Measurement of two-bond JCOHα coupling constants in proteins uniformly enriched with13C

    Article • Journal of Biomolecular NMR, July 1992, Springer Science + Business Media

    Professor Geerten W. Vuister

  86. Resolution enhancement and spectral editing of uniformly 13C-enriched proteins by homonuclear broadband 13C decoupling

    Article • Journal of Magnetic Resonance (1969), June 1992, Elsevier

    Professor Geerten W. Vuister

  87. Gradient-enhanced 3D NOESY-HMQC spectroscopy

    Article • Journal of Biomolecular NMR, May 1992, Springer Science + Business Media

    Professor Geerten W. Vuister

  88. Application of 2D and 3D NMR experiments to the conformational study of a diantennary oligosaccharide

    Article • Journal of Biomolecular NMR, May 1992, Springer Science + Business Media

    Professor Geerten W. Vuister

  89. Gradient-enhanced exchange spectroscopy

    Article • Journal of Magnetic Resonance (1969), April 1992, Elsevier

    Professor Geerten W. Vuister

  90. Gradient-enhanced HMQC and HSQC spectroscopy. Applications to 15N-labeled Mnt repressor

    Article • Journal of the American Chemical Society, December 1991, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  91. Statistical analysis of double NOE transfer pathways in proteins as measured in 3D NOE-NOE spectroscopy

    Article • Journal of Biomolecular NMR, November 1991, Springer Science + Business Media

    Professor Geerten W. Vuister

  92. Homonuclear three-dimensional proton NMR spectroscopy of pike parvalbumin. Comparison of short- and medium-range NOEs from 2D and 3D NMR

    Article • Journal of the American Chemical Society, June 1990, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  93. 3D NOE-NOE spectroscopy of proteins. Observation of sequential 3D NOE cross peaks in arc repressor

    Article • Journal of Magnetic Resonance (1969), May 1990, Elsevier

    Professor Geerten W. Vuister

  94. Structural studies by proton/carbon-13 two-dimensional and three-dimensional HMQC-NOE at natural abundance on complex carbohydrates

    Article • Journal of the American Chemical Society, April 1990, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  95. Assignment strategies in homonuclear three-dimensional proton NMR spectra of proteins

    Article • Biochemistry, February 1990, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  96. Observation of spin-diffusion in biomolecules by three-dimensional NOE-NOE spectroscopy

    Article • Journal of the American Chemical Society, October 1989, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  97. The use of three-dimensional NMR in structural studies of oligosaccharides

    Article • Journal of the American Chemical Society, January 1989, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  98. Nonselective three-dimensional nmr spectroscopy. The 3D NOE-HOHAHA experiment

    Article • Journal of Magnetic Resonance (1969), October 1988, Elsevier

    Professor Geerten W. Vuister

  99. Mobility and solvent exposure of aromatic residues in bacteriorhodopsin investigated by 1 H-NMR and photo-CIDNP-NMR spectroscopy

    Article • FEBS Letters, August 1988, Wiley

    Professor Geerten W. Vuister

  100. Proton NMR resonance assignments and surface accessibility of tryptophan residues of a dimeric phospholipase A2 from Trimeresurus flavoviridis

    Article • FEBS Letters, March 1988, Wiley

    Professor Geerten W. Vuister

  101. Three-dimensional J-resolved NMR spectroscopy

    Article • Journal of Magnetic Resonance (1969), June 1987, Elsevier

    Professor Geerten W. Vuister

  102. Nuclear spin coherence transfer in photochemical reactions

    Article • Journal of the American Chemical Society, September 1986, American Chemical Society (ACS)

    Professor Geerten W. Vuister

  103. Pulse Sequences for Measuring Coupling Constants

    Article • Springer Science + Business Media

    Professor Geerten W. Vuister