All Stories

  1. Thermodynamics and Kinetics of the Deintercalation of a Novel Anthracycline from Double-Stranded Oligonucleotide DNA
  2. Mesoscale modelling of polymer-mediated adhesion: application to tack tests
  3. Simple model for the fracture of a polymer chain: Single-bond potential of mean force and tension-based rate constants for chain rupture
  4. Measuring Oxygen Solubility in Amorphous and Semicrystalline Polyolefins Using Test Particle Insertion: A Comparative Study of Polyethylene and Isotactic Polypropylene
  5. Molecular Simulation of Coarse-grained Systems using Machine Learning
  6. Tailoring Nanoparticle Orientation in Polymer Matrices via Nonuniform Grafting: Implications for Nanoparticle Dispersions and Self-Assembled Nanocomposite Morphologies
  7. Simulating Stretch-Induced Crystallization of Polyethylene Films: Strain Rate and Temperature Effect on the Kinetics and Morphology
  8. Equilibration of linear polyethylene melts with pre-defined molecular weight distributions employing united atom Monte Carlo simulations
  9. Development of a Meshless Kernel-Based Scheme for Particle-Field Brownian Dynamics Simulations
  10. Interactions of a Novel Anthracycline with Oligonucleotide DNA and Cyclodextrins in an Aqueous Environment
  11. Buckling kinetics of graphene membranes under uniaxial compression
  12. Molecular simulations of doxorubicin complexed with native and modified cyclodextrins in water
  13. Addressing the Folding of Intermolecular Springs in Particle Simulations: Fixed Image Convention
  14. Autobiography of Doros N. Theodorou
  15. Addressing Nanocomposite Systems via 3D-SCFT: Assessment of Smearing Approximation and Irregular Grafting Distributions
  16. Network dynamics: a computational framework for the simulation of the glassy state
  17. Molecular simulations of fluoxetine in hydrated lipid bilayers, as well as in aqueous solutions containing β-cyclodextrin
  18. Solvation Free Energy of Dilute Grafted (Nano)Particles in Polymer Melts via the Self-Consistent Field Theory
  19. Investigation of Machine Learning-based Coarse-Grained Mapping Schemes for Organic Molecules
  20. Developing Machine-Learned Potentials for Coarse-Grained Molecular Simulations: Challenges and Pitfalls
  21. Mixing Thermodynamics and Flory–Huggins Interaction Parameter of Polyethylene Oxide/Polyethylene Oligomeric Blends from Kirkwood–Buff Theory and Molecular Simulations
  22. A coarse-grained model for capturing the helical behavior of isotactic polypropylene
  23. Thermodynamic analysis of oligomeric blends by applying the Kirkwood-Buff theory of solutions
  24. In silico study of levodopa in hydrated lipid bilayers at the atomistic level
  25. Effect of Surface Nanopatterning on Slip: The Case of Couette Flow of Long-Chain Polyethylene Melt Flowing Past Gold Surfaces
  26. RuSseL: A Self-Consistent Field Theory Code for Inhomogeneous Polymer Interphases
  27. Potential of Mean Force between Bare or Grafted Silica/Polystyrene Surfaces from Self-Consistent Field Theory
  28. Molecular dynamics simulations of stretch‐induced crystallization in layered polyethylene
  29. Molecular simulations of dopamine in a lipid bilayer
  30. A three-dimensional finite element methodology for addressing heterogeneous polymer systems with simulations based on self-consistent field theory
  31. Mesoscopic simulations of star polyethylene melts at equilibrium and under steady shear flow
  32. Coarse-grained simulations of bidisperse polymer melts
  33. Molecular Dynamics Simulations of Polyethylene Bilayers
  34. Multiscale simulations of polyzwitterions in aqueous bulk solutions and brush array configurations
  35. Structure and thermodynamics of grafted silica/polystyrene dilute nanocomposites investigated through self-consistent field theory
  36. Kinetic concepts and local failure in the interfacial shear strength of epoxy-graphene nanocomposites
  37. Molecular Simulations and Mechanistic Analysis of the Effect of CO2 Sorption on Thermodynamics, Structure, and Local Dynamics of Molten Atactic Polystyrene
  38. Free energy calculations by molecular simulations of deformed polymer glasses
  39. Molecular Dynamics Test of the Stress-Thermal Rule in Polyethylene and Polystyrene Entangled Melts
  40. Atomistic simulations of long-chain polyethylene melts flowing past gold surfaces: structure and wall-slip
  41. Promising Route for the Development of a Computational Framework for Self-Assembly and Phase Behavior Prediction of Ionic Surfactants Using MARTINI
  42. Multiscale Simulations of Graphite-Capped Polyethylene Melts: Brownian Dynamics/Kinetic Monte Carlo Compared to Atomistic Calculations and Experiment
  43. Molecular Modeling Investigations of Sorption and Diffusion of Small Molecules in Glassy Polymers
  44. Self-Consistent Field Theory Coupled with Square Gradient Theory of Free Surfaces of Molten Polymers and Compared to Atomistic Simulations and Experiment
  45. Chameleon: A generalized, connectivity altering software for tackling properties of realistic polymer systems
  46. Molecular dynamics simulations of EPON-862/DETDA epoxy networks: structure, topology, elastic constants, and local dynamics
  47. Thermodynamic Analysis of n-Hexane–Ethanol Binary Mixtures Using the Kirkwood–Buff Theory
  48. Mesoscopic Simulations of Free Surfaces of Molten Polyethylene: Brownian Dynamics/Kinetic Monte Carlo Coupled with Square Gradient Theory and Compared to Atomistic Calculations and Experiment
  49. SimNano: A Trust Region Strategy for Large-Scale Molecular Systems Energy Minimization Based on Exact Second-Order Derivative Information
  50. Slip Spring-Based Mesoscopic Simulations of Polymer Networks: Methodology and the Corresponding Computational Code
  51. Tacticity Effect on the Conformational Properties of Polypropylene and Poly(ethylene–propylene) Copolymers
  52. Thermodynamic analysis of Lennard-Jones binary mixtures using Kirkwood-Buff theory
  53. Computational Studies of Nanographene Systems: Extended Discotics, Covalently Linked “Supermolecules,” and Functionalized Supramolecular Assemblies
  54. Molecular Simulations of Nanographene Systems
  55. Molecular Simulations of Free and Graphite Capped Polyethylene Films: Estimation of the Interfacial Free Energies
  56. General Methodology for Estimating the Stiffness of Polymer Chains from Their Chemical Constitution: A Single Unperturbed Chain Monte Carlo Algorithm
  57. Exploring the interactions of irbesartan and irbesartan–2-hydroxypropyl-β-cyclodextrin complex with model membranes
  58. Slip-Spring Model for the Linear and Nonlinear Viscoelastic Properties of Molten Polyethylene Derived from Atomistic Simulations
  59. Equation of State Based Slip Spring Model for Entangled Polymer Dynamics
  60. Multiscale Molecular Simulations of Polymer-Matrix Nanocomposites
  61. Diffusion of Aromatics in Silicalite-1: Experimental and Theoretical Evidence of Entropic Barriers
  62. Atomistic and Coarse-grained Simulations of Hexabenzocoronene Crystals
  63. Mesoscopic Simulations of Crosslinked Polymer Networks
  64. Molecular Dynamics Study of Polyethylene under Extreme Confinement
  65. Molecular modeling and simulation of atactic polystyrene/amorphous silica nanocomposites
  66. Melting Point and Solid–Liquid Coexistence Properties of α1 Isotactic Polypropylene as Functions of Its Molar Mass: A Molecular Dynamics Study
  67. Molecular Modeling and Simulation of Polymer Nanocomposites at Multiple Length Scales
  68. Multiscale simulations of PS–SiO2nanocomposites: from melt to glassy state
  69. Molecular modeling and simulation of polymer nanocomposites at multiple length scales
  70. Structural and dynamical properties of nanographene molecular wires: A Molecular Dynamics study
  71. Molecular dynamics simulations of alkyl substituted nanographene crystals
  72. 2013 Danckwerts special issue on molecular modelling in chemical engineering
  73. Application of bi-Helmholtz nonlocal elasticity and molecular simulations to the dynamical response of carbon nanotubes
  74. Multiscale simulations of hexa-peri-hexabenzocoronene and hexa-n-dodecyl-hexa-peri-hexabenzocoronene
  75. Determination of the Mechanical Properties of a Poly(methyl methacrylate) Nanocomposite with Functionalized Graphene Sheets through Detailed Atomistic Simulations
  76. Self-Consistent-Field Study of Adsorption and Desorption Kinetics of Polyethylene Melts on Graphite and Comparison with Atomistic Simulations
  77. Monte Carlo simulations of structure and entanglements in polymer melts
  78. Local Segmental Dynamics and Stresses in Polystyrene–C60 Mixtures
  79. Dimensionality reduction of free energy profiles of benzene in silicalite-1: calculation of diffusion coefficients using transition state theory
  80. Tracking a glassy polymer on its energy landscape in the course of elastic deformation
  81. Atomistic simulations of cavitation in a model polyethylene network
  82. Structure of Polymer Layers Grafted to Nanoparticles in Silica–Polystyrene Nanocomposites
  83. Temporal disconnectivity of the energy landscape in glassy systems
  84. Structure and entanglements in short chain branched polyolefin melts
  85. Microscopic Description of Entanglements in Polyethylene Networks and Melts: Strong, Weak, Pairwise, and Collective Attributes
  86. Monte Carlo Simulation of Short Chain Branched Polyolefins: Structure and Properties
  87. On solving the master equation in spatially periodic systems
  88. Diffusion in Nanoporous Materials
  89. Lumping analysis for the prediction of long-time dynamics: From monomolecular reaction systems to inherent structure dynamics of glassy materials
  90. Monte Carlo simulations of a coarse grained model for an athermal all-polystyrene nanocomposite system
  91. Interface of Grafted and Ungrafted Silica Nanoparticles with a Polystyrene Matrix: Atomistic Molecular Dynamics Simulations
  92. Systematic Coarse Graining of 4-Cyano-4′-pentylbiphenyl
  93. A Study of the Entanglement in Systems with Periodic Boundary Conditions
  94. Predicting fluid phase equilibrium via histogram reweighting with Gibbs ensemble Monte Carlo simulations
  95. Temperature Accelerated Dynamics in Glass-Forming Materials
  96. Crystallization and Melting Simulations of Oligomeric α1 Isotactic Polypropylene
  97. Prediction of Infinite Dilution Benzene Solubility in Linear Polyethylene Melts via the Direct Particle Deletion Method
  98. Diffusion via space discretization method to study the concentration dependence of self-diffusivity under confinement
  99. Efficient Parallel Decomposition of Dynamical Sampling in Glass-Forming Materials Based on an “On the Fly” Definition of Metabasins
  100. Progress and Outlook in Monte Carlo Simulations
  101. Benefit of Microscopic Diffusion Measurement for the Characterization of Nanoporous Materials
  102. Diffusion in micropores
  103. Onset of Entanglements Revisited. Dynamical Analysis
  104. Onset of Entanglements Revisited. Topological Analysis
  105. Molecular Dynamics of Carbon Dioxide, Methane and Their Mixtures in a Zeolite Possessing Two Independent Pore Networks as Revealed by Computer Simulations
  106. Prediction of Sorption of CO2 in Glassy Atactic Polystyrene at Elevated Pressures Through a New Computational Scheme
  107. Probing subglass relaxation in polymers via a geometric representation of probabilities, observables, and relaxation modes for discrete stochastic systems
  108. Simulation studies of methane, carbon dioxide, hydrogen and deuterium in ITQ-1 and NaX zeolites
  109. Combined Atomistic Simulation and Quasielastic Neutron Scattering Study of the Low-Temperature Dynamics of Hydrogen and Deuterium Confined in NaX Zeolite
  110. On the Role of Inherent Structures in Glass-Forming Materials: I. The Vitrification Process
  111. On the Role of Inherent Structures in Glass-forming Materials: II. Reconstruction of the Mean Square Displacement by Rigorous Lifting of the Inherent Structure Dynamics
  112. Entanglement Relaxation Time in Polyethylene: Simulation versus Experimental Data
  113. A second-order Markov process for modeling diffusive motion through spatial discretization
  114. Monte Carlo Simulation of Short Chain Branched Polyolefins in the Molten State
  115. Formation of rodlike structures of water between oppositely charged ions in decane and polyethylene
  116. Hierarchical modelling of polymeric materials
  117. Dynamical integration of a Markovian web: A first passage time approach
  118. Monte Carlo simulations of equilibrium solubilities and structure of water in n-alkanes and polyethylene
  119. Quasi-elastic neutron scattering and molecular dynamics simulation as complementary techniques for studying diffusion in zeolites
  120. Coarse-Grained and Reverse-Mapped United-Atom Simulations of Long-Chain Atactic Polystyrene Melts:  Structure, Thermodynamic Properties, Chain Conformation, and Entanglements
  121. Novel Monte Carlo Molecular Simulation Scheme Using Identity-Altering Elementary Moves for the Calculation of Structure and Thermodynamic Properties of Polyolefin Blends
  122. Mesoscopic simulations of the diffusivity of ethane in beds of NaX zeolite crystals: Comparison with pulsed field gradient NMR measurements
  123. Segmental and Chain Dynamics of Isotactic Polypropylene Melts
  124. Coarse Grained End Bridging Monte Carlo Simulations of Poly(ethylene terephthalate) Melt
  125. Sorption Thermodynamics of CO2, CH4, and Their Mixtures in the ITQ-1 Zeolite as Revealed by Molecular Simulations
  126. Accelerating molecular simulations by reversible mapping between local minima
  127. Principles of Molecular Simulation of Gas Transport in Polymers
  128. Topological Analysis of Linear Polymer Melts:  A Statistical Approach
  129. From atomistic simulations to slip-link models of entangled polymer melts: Hierarchical strategies for the prediction of rheological properties
  130. A reversible minimum-to-minimum mapping method for the calculation of free-energy differences
  131. Diffusion of Long n-Alkanes in Silicalite. A Comparison between Neutron Scattering Experiments and Hierarchical Simulation Results
  132. Microscopic Origins for the Favorable Solvation of Carbonate Ether Copolymers in CO2
  133. Self-Consistent-Field Study of Compressible Semiflexible Melts Adsorbed on a Solid Substrate and Comparison with Atomistic Simulations
  134. Hierarchical modeling of amorphous polymers
  135. Coarse graining using pretabulated potentials: Liquid benzene
  136. Diffusion in Fluid Catalytic Cracking Catalysts on Various Displacement Scales and Its Role in Catalytic Performance
  137. Molecular simulation of structure, thermodynamic and transport properties of polymeric membrane materials for hydrocarbon separation
  138. Pulsed-field gradient nuclear magnetic resonance study of transport properties of fluid catalytic cracking catalysts
  139. Detailed Atomistic Molecular Dynamics Simulation of cis-1,4-Poly(butadiene)
  140. Structure and Volumetric Properties of Linear and Triarm Star Polyethylenes from Atomistic Monte Carlo Simulation Using New Internal Rearrangement Moves
  141. Connectivity-Altering Monte Carlo Simulations of the End Group Effects on Volumetric Properties for Poly(ethylene oxide)
  142. Transport Diffusivity of N2 and CO2 in Silicalite:  Coherent Quasielastic Neutron Scattering Measurements and Molecular Dynamics Simulations
  143. Experimental and Self-Consistent-Field Theoretical Study of Styrene Block Copolymer Self-Adhesive Materials
  144. Detailed Atomistic Simulation of the Segmental Dynamics and Barrier Properties of Amorphous Poly(ethylene terephthalate) and Poly(ethylene isophthalate)
  145. Understanding and predicting structure–property relations in polymeric materials through molecular simulations
  146. Diffusivities of CO2 and N2 in silicalite, comparison between quasi-elastic neutron scattering and molecular simulations
  147. Microscopic calculation of the static electric susceptibility of polyethylene
  148. Chain and local dynamics of polyisoprene as probed by experiments and computer simulations
  149. Atomistic Monte Carlo Simulation of Polybutadiene Isomers:  cis-1,4-Polybutadiene and 1,2-Polybutadiene
  150. On the separation between torsion–vibration and conformational relaxation processes in the incoherent intermediate scattering function of polyethylene
  151. Crossover from the Rouse to the Entangled Polymer Melt Regime:  Signals from Long, Detailed Atomistic Molecular Dynamics Simulations, Supported by Rheological Experiments
  152. Polymers at Surfaces and Interfaces
  153. Parallel tempering method for reconstructing isotropic and anisotropic porous media
  154. Atomistic Monte Carlo simulation of strictly monodisperse long polyethylene melts through a generalized chain bridging algorithm
  155. Segmental Dynamics of Atactic Polypropylene As Revealed by Molecular Simulations and Quasielastic Neutron Scattering
  156. Atomistic molecular dynamics simulation of diffusion in binary liquid n-alkane mixtures
  157. Large scale atomistic polymer simulations using Monte Carlo methods for parallel vector processors
  158. A Novel Monte Carlo Scheme for the Rapid Equilibration of Atomistic Model Polymer Systems of Precisely Defined Molecular Architecture
  159. Atomic structure of a high polymer melt
  160. Detailed molecular dynamics simulation of the self-diffusion of n-alkane and cis-1,4 polyisoprene oligomer melts
  161. Linking the atomistic scale and the mesoscale: molecular orbital and solid state packing calculations on poly(p-phenylene)
  162. Variable-Connectivity Monte Carlo Algorithms for the Atomistic Simulation of Long-Chain Polymer Systems
  163. Atomistic Monte Carlo simulation of cis-1,4 polyisoprene melts. I. Single temperature end-bridging Monte Carlo simulations
  164. Atomistic Monte Carlo simulation of cis-1,4 polyisoprene melts. II. Parallel tempering end-bridging Monte Carlo simulations
  165. Mushrooms and Brushes in Thin Films of Diblock Copolymer/Homopolymer Mixtures
  166. Entanglement Network of the Polypropylene/Polyamide Interface. 3. Deformation to Fracture
  167. Calculation of the chemical potential of chain molecules using the staged particle deletion scheme
  168. Coarse-Grained Molecular Simulation of Penetrant Diffusion in a Glassy Polymer Using Reverse and Kinetic Monte Carlo
  169. Directed Bridging Methods for Fast Atomistic Monte Carlo Simulations of Bulk Polymers
  170. A new Monte Carlo simulation approach for the prediction of sorption equilibria of oligomers in polymer melts: Solubility of long alkanes in linear polyethylene
  171. Henry's Constant Analysis for Water and Nonpolar Solvents from Experimental Data, Macroscopic Models, and Molecular Simulation
  172. Diffusion of small molecules in disordered media: study of the effect of kinetic and spatial heterogeneities
  173. Local Structure and Dynamics of trans-Polyisoprene Oligomers
  174. Prediction of Permeation Properties of CO2 and N2 through Silicalite via Molecular Simulations
  175. Calculation of refractive indices and third-harmonic generation susceptibilities of liquid benzene and water: Comparison of continuum and discrete local-field theories
  176. Atomistic Monte Carlo simulation of steady-state uniaxial elongational flow of long-chain polyethylene melts: dependence of the melt degree of orientation on stress, molecular length and elongational strain rate
  177. Molecular Simulation of Phase Equilibria for Water−n-Butane and Water−n-Hexane Mixtures
  178. Atomistic simulation of the birefringence of uniaxially stretched polyethylene melts
  179. Entanglement Network of the Polypropylene/Polyamide Interface. 2. Network Generation
  180. Entanglement Network of the Polypropylene/Polyamide Interface. 1. Self-Consistent Field Model
  181. Effect of Tacticity on the Molecular Dynamics of Polypropylene Melts
  182. End-Bridging Monte Carlo:  A Fast Algorithm for Atomistic Simulation of Condensed Phases of Long Polymer Chains
  183. Molecular Simulation of α-Olefins Using a New United-Atom Potential Model:  Vapor−Liquid Equilibria of Pure Compounds and Mixtures
  184. On the calculation of the chemical potential using the particle deletion scheme
  185. On the calculation of the chemical potential using the particle deletion scheme
  186. Elementary structural transitions in the amorphous Lennard-Jones solid using multidimensional transition-state theory
  187. Phase Equilibria of Mixtures Containing Chain Molecules Predicted through a Novel Simulation Scheme
  188. Molecular Simulation of the Pure n-Hexadecane Vapor−Liquid Equilibria at Elevated Temperature
  189. Preface
  190. Simulation of hydrocarbon diffusion in zeolites
  191. Variable Connectivity Method for the Atomistic Monte Carlo Simulation of Polydisperse Polymer Melts
  192. Self-consistent field model of the polymer/diblock copolymer/polymer interface
  193. Investigation of the dynamics of benzene in silicalite using transition-state theory
  194. Editorial
  195. A hierarchical atomistic/lattice simulation approach for the prediction of adsorption thermodynamics of benzene in silicalite
  196. Low-Occupancy Sorption Thermodynamics of Long Alkanes in Silicalite Via Molecular Simulation
  197. Static atomistic modelling of the structure and ring dynamics of bulk amorphous polystyrene
  198. Geometric analysis of diffusion pathways in glassy and melt atactic polypropylene
  199. Structural and electronic features of a Broensted acid site in H-ZSM-5
  200. A concerted rotation algorithm for atomistic Monte Carlo simulation of polymer melts and glasses
  201. Stress tensor in model polymer systems with periodic boundaries
  202. A chain of states method for investigating infrequent event processes occurring in multistate, multidimensional systems
  203. Molecular Simulations of Methane Adsorption in Silicalite
  204. Molecular dynamics simulation of a glassy polymer surface
  205. Transition-state studies of xenon and sulfur hexafluoride diffusion in silicalite
  206. Atomistic simulation of a glassy polymer/graphite interface
  207. Analytical treatment of the volume and surface area of molecules formed by an arbitrary collection of unequal spheres intersected by planes
  208. The effects of local structural relaxation on aluminum siting within H-ZSM-5
  209. Atomistic simulation of a glassy polymer surface
  210. Variable-density model of polymer melt surfaces: structure and surface tension
  211. Variable-density model of polymer melt/solid interfaces: structure, adhesion tension, and surface forces
  212. Interfacial structure and dynamics of macromolecular liquids: a Monte Carlo simulation approach
  213. Lattice models for bulk polymers at interfaces
  214. Microscopic structure and thermodynamic properties of bulk copolymers and surface-active polymers at interfaces. 1. Theory
  215. Microscopic structure and thermodynamic properties of bulk copolymers and surface-active polymers at interfaces. 2. Results for some representative chain architectures
  216. Structure and thermodynamics of bulk homopolymer solid interfaces: a site lattice model approach
  217. Local structure and the mechanism of response to elastic deformation in a glassy polymer
  218. Atomistic modeling of mechanical properties of polymeric glasses
  219. Detailed molecular structure of a vinyl polymer glass
  220. Shape of unperturbed linear polymers: polypropylene
  221. Diffusion and reaction in blocked and high occupancy zeolite catalysts
  222. Elementary Steps and Mechanisms: Sections 5.3– 5.5
  223. Equilibration and Coarse-Graining Methods for Polymers
  224. Atomistic Monte Carlo simulation and continuum mean field theory of the structure and equation of state properties of alkane and polymer melts