All Stories

  1. Probabilistic edge weights fine-tune Boolean network dynamics

    Article • PLoS Computational Biology, October 2022, PLOS

    Dr. David Deritei

  2. The anatomy of social dynamics in escape rooms

    Article • Scientific Reports, June 2022, Springer Science + Business Media

    Dr. David Deritei

  3. Translocating proteins compartment-specifically alter the fate of epithelial-mesenchymal transition in a compartmentalized Boolean network model

    Article • npj Systems Biology and Applications, June 2022, Springer Science + Business Media

    Dr. David Deritei

  4. Probabilistic Edge Weights fine-tune Boolean network dynamics

    Article • January 2022, Cold Spring Harbor Laboratory Press

    Dr. David Deritei

  5. pystablemotifs: Python library for attractor identification and control in Boolean networks

    Article • Bioinformatics, December 2021, Oxford University Press (OUP)

    Dr. David Deritei

  6. Parity and time reversal elucidate both decision-making in empirical models and attractor scaling in critical Boolean networks

    Article • Science Advances, July 2021, American Association for the Advancement of Science

    Dr. David Deritei

  7. Quantifying Life Quality as Walkability on Urban Networks: The Case of Budapest

    Article • November 2019, Springer Science + Business Media

    Dr. David Deritei

  8. A feedback loop of conditionally stable circuits drives the cell cycle from checkpoint to checkpoint

    Article • Scientific Reports, November 2019, Springer Science + Business Media

    Dr. David Deritei, Withmore Williams Associate Professor Erzsébet Regan

  9. Boolean model of growth signaling, cell cycle and apoptosis predicts the molecular mechanism of aberrant cell cycle progression driven by hyperactive PI3K

    Article • PLoS Computational Biology, March 2019, PLOS

    Dr. David Deritei, Withmore Williams Associate Professor Erzsébet Regan

  10. Stochastic graph Voronoi tessellation reveals community structure

    Article • February 2017, American Physical Society (APS)

    Dr. David Deritei

  11. Principles of dynamical modularity in biological regulatory networks

    Article • Scientific Reports, March 2016, Springer Science + Business Media

    Dr. David Deritei, Withmore Williams Associate Professor Erzsébet Regan

  12. Community detection by graph Voronoi diagrams

    Article • New Journal of Physics, June 2014, Institute of Physics Publishing

    Dr. David Deritei, Withmore Williams Associate Professor Erzsébet Regan