All Stories

  1. Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments

    Article • November 2023, ACM (Association for Computing Machinery)

    Daniel S Katz, Seung-Jin Sul, Alejandro Duque, Dr Matteo Turilli, Daniela Cassol

  2. Fine-grained Policy-driven I/O Sharing for Burst Buffers

    Article • November 2023, ACM (Association for Computing Machinery)

    Daniel S Katz, William Gropp

  3. Automatic Reproduction of Workflows in the Snakemake Workflow Catalog and nf-core Registries

    Article • June 2023, ACM (Association for Computing Machinery)

    Daniel S Katz

  4. Software citation

    Article • Information Services & Use, December 2021, IOS Press

    Daniel S Katz

  5. Toward Interoperable Cyberinfrastructure: Common Descriptions for Computational Resources and Applications

    Article • July 2020, ACM (Association for Computing Machinery)

    Daniel S Katz

  6. Scalable Parallel Programming in Python with Parsl

    Article • July 2019, ACM (Association for Computing Machinery)

    Daniel S Katz

  7. The principles of tomorrow's university

    Article • F1000Research, December 2018, Faculty of 1000, Ltd.

    Daniel S Katz, Devin Berg, Anita de Waard, Professor Kyle E Niemeyer, Daniel Reed, Christine Borgman, Edward Seidel, Jeffrey Spies

  8. A multi-disciplinary perspective on emergent and future innovations in peer review

    Article • F1000Research, July 2017, Faculty of 1000, Ltd.

    Mg. Josmel Pacheco-Mendoza, Dr Lauren B Collister, Dr Dasapta Erwin Irawan, Damien Jacques, Paola Masuzzo, Professor Kyle E Niemeyer, Daniel S Katz, Bastian Greshake, Sebastien Renaut, Professor Tom Crick, Christina Pikas, Daniel O'Donnell, Yehia Elkhatib, Lillian Rigling, Devin Berg, Daniel Graziotin

  9. Four simple recommendations to encourage best practices in research software

    Article • F1000Research, June 2017, Faculty of 1000, Ltd.

    Dr Monther Alhamdoosh, Mr Rafael C Jimenez, Mr Neil P Chue Hong, Professor Josep Ll. Gelpi, Prof Carole A Goble, Rob Hooft, Daniel S Katz, Mr Federico López Gómez, Dr Sonika Tyagi, Sonika Tyagi, Mateusz Kuzak, Allegra Via, Xiaochuan (Harry) Wang, Montserrat Gonzalez, Björn Grüning, Andrew Treloar, Nathan Watson-Haigh, Dr. Yasset Perez-Riverol

  10. The Challenge and Promise of Software Citation for Credit, Identification, Discovery, and Reuse

    Article • Journal of Data and Information Quality, October 2016, ACM (Association for Computing Machinery)

    Professor Kyle E Niemeyer, Daniel S Katz

  11. Transitive Credit as a Means to Address Social and Technological Concerns Stemming from Citation and Attribution of Digital Products

    Article • Journal of Open Research Software, September 2014, Ubiquity Press, Ltd.

    Daniel S Katz

  12. The Case for Workflow-Aware Storage:An Opportunity Study

    Article • Journal of Grid Computing, July 2014, Springer Science + Business Media

    Daniel S Katz

  13. Summary of the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1)

    Article • Journal of Open Research Software, July 2014, Ubiquity Press, Ltd.

    Daniel S Katz

  14. A Framework for Discussing e-Research Infrastructure Sustainability

    Article • Journal of Open Research Software, July 2014, Ubiquity Press, Ltd.

    Daniel S Katz

  15. Design and evaluation of the gemtc framework for GPU-enabled many-task computing

    Article • June 2014, ACM (Association for Computing Machinery)

    Daniel S Katz

  16. Evaluating storage systems for scientific data in the cloud

    Article • June 2014, ACM (Association for Computing Machinery)

    Daniel S Katz

  17. Parallelizing the execution of sequential scripts

    Article • November 2013, ACM (Association for Computing Machinery)

    Daniel S Katz

  18. Constructing a Social Content Delivery Network for eScience

    Article • October 2013, Institute of Electrical & Electronics Engineers (IEEE)

    Daniel S Katz, Omer Rana

  19. JETS: Language and System Support for Many-Parallel-Task Workflows

    Article • Journal of Grid Computing, June 2013, Springer Science + Business Media

    Daniel S Katz

  20. Distributed computing practice for large‐scale science and engineering applications

    Article • Concurrency and Computation Practice and Experience, September 2012, Wiley

    Daniel S Katz

  21. Turbine

    Article • May 2012, ACM (Association for Computing Machinery)

    Daniel S Katz