Charlotte Deane
University of Oxford
My co-authors include
Dr. Sanne Abeln
Cristian Regep
Dr Rhodri JK Saunders
My Publications
Looking for therapeutic antibodies in next-generation sequencing repositories
mAbs
July 2019
Antibody side chain conformations are position-dependent
Proteins Structure Function and Bioinformatics
January 2018
Co-evolution techniques are reshaping the way we do structural bioinformatics
F1000Research
July 2017
Faculty of 1000 evaluation for bbcontacts: prediction of β-strand pairing from direct c...
July 2017
Faculty of 1000 evaluation for OMPcontact: An Outer Membrane Protein Inter-Barrel Resid...
July 2017
Faculty of 1000 evaluation for Dimeric interactions and complex formation using direct ...
July 2017
Faculty of 1000 evaluation for Inferring interaction partners from protein sequences.
July 2017
Faculty of 1000 evaluation for Structured States of Disordered Proteins from Genomic Se...
July 2017
Faculty of 1000 evaluation for From residue coevolution to protein conformational ensem...
July 2017
Faculty of 1000 evaluation for Large-scale determination of previously unsolved protein...
July 2017
Faculty of 1000 evaluation for Protein structure determination using metagenome sequenc...
July 2017
The H3 loop of antibodies shows unique structural characteristics
Proteins Structure Function and Bioinformatics
April 2017
Faculty of 1000 evaluation for Comment on Three X-ray Crystal Structure Papers.
May 2016
ANARCI: antigen receptor numbering and receptor classification
Bioinformatics
September 2015
Structural Bridges through Fold Space
PLoS Computational Biology
September 2015
Alignment-free protein interaction network comparison
Bioinformatics
August 2014
Faculty of 1000 evaluation for How precise are reported protein coordinate data?
May 2014
Helix kinks are equally prevalent in soluble and membrane proteins
Proteins Structure Function and Bioinformatics
April 2014
Faculty of 1000 evaluation for WeFold: A Coopetition for Protein Structure Prediction.
April 2014
Protein Modeling and Structural Prediction
January 2014
Faculty of 1000 evaluation for Conservation of Protein Structure over Four Billion Years.
August 2013
Faculty of 1000 evaluation for A mathematical framework for protein structure comparison.
May 2013
Faculty of 1000 evaluation for Evolutionary conservation of codon optimality reveals hi...
April 2013
Local Network Patterns in Protein-Protein Interfaces
PLoS ONE
March 2013
Faculty of 1000 evaluation for Principles for designing ideal protein structures.
February 2013
How long is a piece of loop?
PeerJ
February 2013
Faculty of 1000 evaluation for Three-dimensional structures of membrane proteins from g...
January 2013
MP-T: improving membrane protein alignment for structure prediction
Bioinformatics
October 2012
Faculty of 1000 evaluation for Measuring the evolutionary rewiring of biological networks.
June 2012
Protein Interaction Networks and Their Statistical Analysis
September 2011
The imprint of codons on protein structure
Biotechnology Journal
May 2011
Signatures of co-translational folding
Biotechnology Journal
April 2011
Predicting antibody complementarity determining region structures without classification
Molecular BioSystems
January 2011
MEDELLER: homology-based coordinate generation for membrane proteins
Bioinformatics
October 2010
Synonymous codon usage influences the local protein structure observed
Nucleic Acids Research
June 2010
Exploring the potential of template-based modelling
Bioinformatics
June 2010
Protein structure prediction begins well but ends badly
Proteins Structure Function and Bioinformatics
October 2009
Functionally guided alignment of protein interaction networks for module detection
Bioinformatics
October 2009
iMembrane: homology-based membrane-insertion of proteins
Bioinformatics
February 2009
An assessment of the uses of homologous interactions
Bioinformatics
November 2007
Fold usage on genomes and protein fold evolution
Proteins Structure Function and Bioinformatics
July 2005
PROTEIN COMPARATIVE MODELLING AND DRUG DISCOVERY
January 2003
Improved protein loop prediction from sequence alone
Protein Engineering Design and Selection
July 2001
