What is it about?

The present work focuses on nsSNPs in human Carboxylesterase 1 (hCES1), an enzyme involved in drug metabolism. We highlight how prioritization of functional nsSNPs through computational prediction techniques in combination with structure-based approaches, namely, molecular docking and molecular dynamics simulations are powerful tools to provide insight into the underlying molecular mechanisms of nsSNPs phenotypic effects at microscopic level. Examples of in silico studies of carboxylesterases are discussed, ranging from exploring the effect of mutations on enzyme activity to predicting the metabolism of new hCES1 substrates, as well as to guiding rational design of carboxylesterases selective inhibitors.

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Why is it important?

Genetic variations in drug metabolizing enzymes have been reported to influence pharmacokinetics, drug dosage, and other aspects that affect therapeutic outcomes. Most particularly, nonsynonymous single nucleotide polymorphisms (nsSNPs) resulting in amino acid changes disrupt potential functional sites responsible for the protein activity, protein structure or stability that can account for individual susceptibility to disease and drug response. Investigating the impact of nsSNPs at a protein’s structural level is a key step in understanding the relationship between genetic variants and the resulting phenotypic changes.

Perspectives

With the advances in structural genomics, high- throughput SNP detection and functional annotation, together with fast and cost-effective structure-based simulations techniques, it is now possible to study the structural context of nsSNPs and elucidate the underlying mechanisms of phenotypic effects, along with other mechanisms related to CESs substrate binding and catalysis. Eventually, one should take advantage of the available resources and techniques to carry out further structure-based studies focused on hCES1 to predict and improve individual therapeutic outcomes of hCES1 dependent drugs, hence providing clues to the personalized drug treatment.

olivier Taboureau

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This page is a summary of: Investigating the impact of missense mutations in hCES1 by in silico structure-based approaches, Drug Metabolism and Personalized Therapy, January 2016, De Gruyter,
DOI: 10.1515/dmpt-2015-0034.
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