What is it about?

If you are interested in study the gene expression of any sample, and you decided to do RNAseq, you will find there are a lot of possibilities to analyze your data. If you want to rely in community expertise, you should use bcbio-nextgen, it is a python framework for sequencing data supported and maintained by researchers over the world. However the output could be overwhelming, but with bcbioRNASeq package everything is contained in a single place and it is easy to access all the information with a single function.

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Why is it important?

It helps to automatize and save time, time that you can invest in the important question, what is the gene expression profile telling you.

Perspectives

This package will let you getting working on the data immediately, and avoid possible technical problems or figuring out where that specific results is. Time saver.

Lorena Pantano
Harvard University

Read the Original

This page is a summary of: bcbioRNASeq: R package for bcbio RNA-seq analysis, F1000Research, November 2017, Faculty of 1000, Ltd.,
DOI: 10.12688/f1000research.12093.1.
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