What is it about?

StrainHub is a bioinformatics tool to generate pathogen transmission networks through a phylogenetics approach. The goal of the application is to find patterns on the metadata (e.g., host, location, risk factor) associated with the pathogen to understand the dynamic of the disease.

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This page is a summary of: StrainHub: A phylogenetic tool to construct pathogen transmission networks, May 2019, Cold Spring Harbor Laboratory Press,
DOI: 10.1101/650283.
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