What is it about?

Peptide and protein design involves experimentally characterizing the building blocks using chemical constructs. I have been successful in experimentally establishing the design of beta-hairpin motifs using synthetic peptides. This study is the first study to investigate the folding of hydrophobic linear peptide sequences into beta hairpins using computational methods.

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Why is it important?

This is an important step in investigating the folding of synthetic peptides harboring non-natural amino acids as nucleating agents of protein folds (beta-turns). This study clearly establishes that we can computationally investigate the folding of short peptide segments, before investing in them experimentally.

Perspectives

This study is my brain child, as I want to establish that computation and experimentation can complement each other.

Dr. Raghavender S Upadhyayula
Centre for DNA Fingerprinting & Diagnostics

Read the Original

This page is a summary of: Ultrafast folding and molecular dynamics of a linear hydrophobic β-hairpin, Journal of Biomolecular Structure and Dynamics, December 2013, Taylor & Francis,
DOI: 10.1080/07391102.2012.738612.
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