All Stories

  1. In Vitro, In Vivo and In Silico Assessment of the Antimicrobial and Immunomodulatory Effects of a Water Buffalo Cathelicidin (WBCATH) in Experimental Pulmonary Tuberculosis
  2. In biomedicine, written words and phrases are a great untapped source of mineable data.
  3. Occurrence of Antimicrobial Resistance Genes in the Oral Cavity of Cats with Chronic Gingivostomatitis
  4. New insight into how covalent carbohydrate adducts cause disease by disrupting protein function.
  5. Editorial: Breaking the Discovery Impasse (Part 2): Deep Learning New Tricks from Old Data
  6. Development of novel inhibitors for 3C proteases of coronaviruses and related targets.
  7. Editorial: Breaking the Discovery Impasse (part 1): A Case for Deep Learning
  8. Structure-guided design, synthesis and evaluation of oxazolidinone-based inhibitors of norovirus 3CL protease
  9. Understanding the prion-like conformational shifts underlying many neurological disorders
  10. Gerald Lushington: a brief statement of research interests
  11. Editorial: Great Science: Literature, Logic and a Bit of Modeling Glue
  12. Design, synthesis, and evaluation of a novel series of macrocyclic inhibitors of norovirus 3CL protease
  13. Chemical Informatics
  14. Righting the Ship
  15. Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors
  16. Editorial: Beyond Pills and Needles: Delivering on New Promise
  17. Cover Picture: Enantiospecific Synthesis and Cytotoxicity Evaluation of Oximidine II Analogues (ChemMedChem 15/2016)
  18. Structure-based design and synthesis of triazole-based macrocyclic inhibitors of norovirus protease: Structural, biochemical, spectroscopic, and antiviral studies
  19. Enantiospecific Synthesis and Cytotoxicity Evaluation of Oximidine II Analogues
  20. Editorial: Validate and Verify: Keys to Scientific Excellence
  21. Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease
  22. Biomedical research: a house of cards?
  23. In Memoriam Lester Mitscher
  24. Glycosylation Effects on FSH-FSHR Interaction Dynamics: A Case Study of Different FSH Glycoforms by Molecular Dynamics Simulations
  25. The Mire of Medical Talk Shows
  26. Editorial Board Member Gerald Lushington
  27. Editorial: Computational Toxicology: Screening, Chemistry, or Much More?
  28. Editorial: Mining for Pharmacophores in Phenotypic Screens
  29. Comparative Modeling of Proteins
  30. Editorial: Chemical Screening: Thinking Big with Big Data
  31. To screen or not to screen: an impassioned plea for smarter chemical libraries to improve drug lead finding
  32. Cloning and characterization of feline islet glucokinase
  33. ASSAY TECHNOLOGIES FOR PROTEASES
  34. Chemical Informatics and the Drug Discovery Knowledge Pyramid
  35. Potent inhibition of norovirus by dipeptidyl α-hydroxyphosphonate transition state mimics
  36. Macrocyclic inhibitors of 3C and 3C-like proteases of picornavirus, norovirus, and coronavirus
  37. Solution-Phase Parallel Synthesis of a Multisubstituted Cyclic Imidate Library
  38. Solution-Phase Synthesis of a Diverse Library of Benzisoxazoles Utilizing the [3 + 2] Cycloaddition of in Situ-Generated Nitrile Oxides and Arynes
  39. An Overview of Computational Life Science Databases & Exchange Formats of Relevance to Chemical Biology Research
  40. Clinical Relevance of Cathelicidin in Infectious Disease
  41. Cardiac beta-defensins upregulate with a high fat diet and influence monocyte migration
  42. Design, synthesis and characterization of novel 1,2-benzisothiazol-3(2H)-one and 1,3,4-oxadiazole hybrid derivatives: Potent inhibitors of Dengue and West Nile virus NS2B/NS3 proteases
  43. ChemInform Abstract: Synthesis of an Isoindoline-Annulated, Tricyclic Sultam Library via Microwave-Assisted, Continuous-Flow Organic Synthesis (MACOS).
  44. Exploring chemical diversity via a modular reaction pairing strategy
  45. Automated Synthesis of a Library of Triazolated 1,2,5-Thiadiazepane 1,1-Dioxides via a Double Aza-Michael Strategy
  46. Differentiating between Models of Epothilone Binding to Microtubules Using Tubulin Mutagenesis, Cytotoxicity, and Molecular Modeling
  47. Solution-Phase Synthesis of a Highly Substituted Furan Library
  48. Synthesis of an Isoindoline-Annulated, Tricyclic Sultam Library via Microwave-Assisted, Continuous-Flow Organic Synthesis (MACOS)
  49. Inhibitors of Dengue virus and West Nile virus proteases based on the aminobenzamide scaffold
  50. Potent inhibition of norovirus 3CL protease by peptidyl α-ketoamides and α-ketoheterocycles
  51. Facile (Triazolyl)methylation of MACOS-derived Benzofused Sultams Utilizing ROMP-derived OTP Reagents
  52. Interactions of Bordetella pertussis adenylyl cyclase toxin CyaA with calmodulin mutants and calmodulin antagonists: Comparison with membranous adenylyl cyclase I
  53. Acetylcholinesterase Reprised: Molecular Modeling with the Whole Toolkit
  54. Synthesis of a Unique Isoindoline/Tetrahydroisoquinoline-based Tricyclic Sultam Library Utilizing a Heck-aza-Michael Strategy
  55. Targeting of Histone Acetyltransferase p300 by Cyclopentenone Prostaglandin Δ 12 -PGJ 2 through Covalent Binding to Cys 1438
  56. Inhibitors of membranous adenylyl cyclases
  57. Inhibition of Dengue virus and West Nile virus proteases by click chemistry-derived benz[d]isothiazol-3(2H)-one derivatives
  58. Multi-target protein-chemical interaction prediction using task-regularized and boosted multi-task learning
  59. Synthesis of Amino-Benzothiaoxazepine-1,1-dioxides Utilizing a Microwave-Assisted, S N Ar Protocol
  60. A Modular Reaction Pairing Approach to the Diversity-Oriented Synthesis of Fused- and Bridged-Polycyclic Sultams
  61. Application of 6,7-Indole Aryne Cycloaddition and Pd(0)-Catalyzed Suzuki–Miyaura and Buchwald–Hartwig Cross-Coupling Reactions for the Preparation of Annulated Indole Libraries
  62. Triazole-Containing Isothiazolidine 1,1-Dioxide Library Synthesis: One-Pot, Multi-Component Protocols for Small Molecular Probe Discovery
  63. Design, synthesis, and evaluation of inhibitors of Norwalk virus 3C protease
  64. Structure–activity relationships for the interactions of 2′- and 3′-(O)-(N-methyl)anthraniloyl-substituted purine and pyrimidine nucleotides with mammalian adenylyl cyclases
  65. Characterizing the Diversity and Biological Relevance of the MLPCN Assay Manifold and Screening Set
  66. LipidomeDB Data Calculation Environment: Online Processing of Direct-Infusion Mass Spectral Data for Lipid Profiles
  67. The 3q29 microdeletion syndrome: Report of three new unrelated patients and in silico “RNA binding” analysis of the 3q29 region
  68. Solution-Phase Parallel Synthesis of a Diverse Library of 1,2-Dihydroisoquinolines
  69. Automated Synthesis of a 184-Member Library of Thiadiazepan-1,1-dioxide-4-ones
  70. Structural Basis for the High-Affinity Inhibition of Mammalian Membranous Adenylyl Cyclase by 2′,3′-O-(N-Methylanthraniloyl)-Inosine 5′-Triphosphate
  71. 1,3‐Allylic Strain as a Strategic Diversification Element for Constructing Libraries of Substituted 2‐Arylpiperidines
  72. 1,3‐Allylic Strain as a Strategic Diversification Element for Constructing Libraries of Substituted 2‐Arylpiperidines
  73. Similarity boosting for label noise tolerance in protein-chemical interaction prediction
  74. The BioAssay network and its implications to future therapeutic discovery
  75. A filter-based feature selection approach for identifying potential biomarkers for lung cancer
  76. Exploratory analysis of the BioAssay Network with implications to therapeutic discovery
  77. Design, Synthesis, and In Vitro Evaluation of Potential West Nile Virus Protease Inhibitors Based on the 1-Oxo-1,2,3,4-tetrahydroisoquinoline and 1-Oxo-1,2-dihydroisoquinoline Scaffolds
  78. S N Ar-Based, Facile Synthesis of a Library of Benzothiaoxazepine-1,1′-dioxides
  79. Uptake, Distribution and Diffusivity of Reactive Fluorophores in Cells: Implications toward Target Identification
  80. Crystal Structure of Histamine Dehydrogenase from Nocardioides simplex
  81. GPD: A Graph Pattern Diffusion Kernel for Accurate Graph Classification with Applications in Cheminformatics
  82. Utilization of the 1,2,3,5-thiatriazolidin-3-one 1,1-dioxide scaffold in the design of potential inhibitors of human neutrophil proteinase 3
  83. ChemInform Abstract: Solution-Phase Parallel Synthesis of a Multisubstituted Benzo[b]thiophene Library.
  84. Reagent based DOS: A “Click, Click, Cyclize” strategy to probe chemical space
  85. Application of kernel functions for accurate similarity search in large chemical databases
  86. A multi-tier data mining workflow to analyze the age related shift from diglycosylated- to tetra-glycosylated-FSH secretion by the anterior pituitary
  87. Systematic data integration platform for functional glycomics
  88. ChemInform Abstract: One-Pot, Three-Component, Domino Heck-aza-Michael Approach to Libraries of Functionalized 1,1-Dioxido-1,2-benzisothiazoline-3-acetic Acids.
  89. Feature Selection in the Tensor Product Feature Space
  90. The C1 homodimer of adenylyl cyclase binds nucleotides with high affinity but possesses exceedingly low catalytic activity
  91. Application of Kernel Functions for Accurate Similarity Search in Large Chemical Databases
  92. CGM: A biomedical text categorization approach using concept graph mining
  93. Temperature dependent 2nd derivative absorbance spectroscopy of aromatic amino acids as a probe of protein dynamics
  94. Novel synthetic inhibitors of 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase activity that inhibit tumor cell proliferation and are structurally unrelated to existing statins
  95. Solution-Phase Parallel Synthesis of a Multi-substituted Benzo[ b ]thiophene Library
  96. Highly Substituted Indole Library Synthesis by Palladium-Catalyzed Coupling Reactions in Solution and on a Solid Support
  97. Distinct interactions of 2′- and 3′-O-(N-methyl)anthraniloyl-isomers of ATP and GTP with the adenylyl cyclase toxin of Bacillus anthracis, edema factor
  98. One-Pot, Three-Component, Domino Heck-aza-Michael Approach to Libraries of Functionalized 1,1-Dioxido-1,2-benzisothiazoline-3-acetic Acids
  99. Identification, Ki determination and CoMFA analysis of nuclear receptor ligands as competitive inhibitors of OATP1B1-mediated estradiol-17β-glucuronide transport
  100. GRAPH WAVELET ALIGNMENT KERNELS FOR DRUG VIRTUAL SCREENING
  101. Mechanism-based inhibitors of serine proteases with high selectivity through optimization of S′ subsite binding
  102. ChemInform Abstract: Parallel Synthesis of a Multi-Substituted Benzo[c]furan Library.
  103. Key Residues Controlling Binding of Diverse Ligands to Human Cytochrome P450 2A Enzymes
  104. ChemInform Abstract: Solution Phase Synthesis of a Diverse Library of Highly Substituted Isoxazoles.
  105. GOAPhAR: An Integrative Discovery Tool for Annotation, Pathway Analysis
  106. G-hash
  107. Differences in Paclitaxel and Docetaxel Interactions with Tubulin Detected by Mutagenesis of Yeast Tubulin
  108. Parallel Synthesis of a Multi-Substituted Benzo[b]furan Library
  109. GPM: A graph pattern matching kernel with diffusion for chemical compound classification
  110. Solution Phase Synthesis of a Diverse Library of Highly Substituted Isoxazoles
  111. Design and Synthesis of Medium-Ring Lactam Libraries Inspired by Octalactin A. A Convergent−Divergent Approach
  112. GRAPH WAVELET ALIGNMENT KERNELS FOR DRUG VIRTUAL SCREENING
  113. The paclitaxel site in tubulin probed by site-directed mutagenesis ofSaccharomyces cerevisiaeβ-tubulin
  114. Deoxycholate Interacts with IpaD of Shigella flexneri in Inducing the Recruitment of IpaB to the Type III Secretion Apparatus Needle Tip
  115. Novel Algorithms for the Identification of Biologically Informative Chemical Diversity Metrics
  116. Ionic Immobilization, Diversification, and Release: Application to the Generation of a Library of Methionine Aminopeptidase Inhibitors
  117. Studies Towards the Synthesis of Methionine Aminopeptidase Inhibitors: Diversification Utilizing a ROMP-Derived Coupling Reagent
  118. Solution-Phase Parallel Synthesis of Hexahydro-1 H -isoindolone Libraries via Tactical Combination of Cu-Catalyzed Three-Component Coupling and Diels–Alder Reactions
  119. FEATURE SELECTION IN VALIDATING MASS SPECTROMETRY DATABASE SEARCH RESULTS
  120. Comprehensive Study of Sansalvamide A Derivatives and their Structure–Activity Relationships against Drug-Resistant Colon Cancer Cell Lines
  121. Activation and Inhibition of Adenylyl Cyclase Isoforms by Forskolin Analogs
  122. Comparative Modeling of Proteins
  123. Rat Cardiomyocytes Express a Classical Epithelial Beta-Defensin
  124. CHEMICAL COMPOUND CLASSIFICATION WITH AUTOMATICALLY MINED STRUCTURE PATTERNS
  125. One-Step Synthesis of Oxazoline and Dihydrooxazine Libraries.
  126. Structure-Based Quantitative Structure Activity Relationship Analysis of Omuralide Analogs in the 20S Proteasome: A Covalent Inhibitor COMBINE Study
  127. Whither Combine? New Opportunities for Receptor-Based QSAR
  128. Encircled Proton
  129. Solution-Phase Parallel Synthesis of a Library of Δ2-Pyrazolines.
  130. One-Step Synthesis of Oxazoline and Dihydrooxazine Libraries
  131. Structure of the Human Lung Cytochrome P450 2A13
  132. A conformational transition in the adenylyl cyclase catalytic site yields different binding modes for ribosyl-modified and unmodified nucleotide inhibitors
  133. The major vault protein is related to the toxic anion resistance protein (TelA) family
  134. Solution-Phase Parallel Synthesis of a Library of Δ 2 -Pyrazolines
  135. Bioinformatics process management: information flow via a computational journal
  136. Canine cathelicidin (K9CATH): Gene cloning, expression, and biochemical activity of a novel pro-myeloid antimicrobial peptide
  137. Design, synthesis, and antiproliferative and CDK2-cyclin a inhibitory activity of novel flavopiridol analogues
  138. Monte Carlo simulations of CO2-expanded acetonitrile
  139. Stability and Electronic Properties of Nitrogen Nanoneedles and Nanotubes
  140. CoMSIA/QSAR Models for Vacuolar (H+) ATPase Inhibition by Selected Benzoate and Benzolactone Species
  141. Support Vector Machines in HTS Data Mining: Type I MetAPs Inhibition Study
  142. Molecular modeling analysis of the interaction of novel bis-cationic ligands with the lipid A moiety of lipopolysaccharide
  143. Mechanistic Insight into Acetylcholinesterase Inhibition and Acute Toxicity of Organophosphorus Compounds:  A Molecular Modeling Study
  144. The 2,6-Diisocyanoazulene Motif:  Synthesis and Efficient Mono- and Heterobimetallic Complexation with Controlled Orientation of the Azulenic Dipole
  145. Anti-Endotoxin Agents. 3. Rapid Identification of High-Affinity Lipopolysaccharide-Binding Compounds in a Substituted Polyamine Library
  146. Editorial [Hot Topic: Computational Approaches in Medicinal Chemistry: Surveys, Case Studies and Future Directions (Guest Editor: Gerald H. Lushington)]
  147. Acetylcholinesterase: Molecular Modeling with the Whole Toolkit
  148. Deamidation of model β-turn cyclic peptides in the solid state
  149. Interactions of organophosphorus and related compounds with cholinesterases, a theoretical study
  150. Theoretically predicted structures of plasma membrane Ca2+-ATPase and their susceptibilities to oxidation
  151. Differential interactions of G-proteins and adenylyl cyclase with nucleoside 5′-triphosphates, nucleoside 5′-[γ-thio]triphosphates and nucleoside 5′-[β,γ-imido]triphosphates
  152. Ab initio Calculations of G-tensors
  153. Novel splice isoforms for NLGN3 and NLGN4 with possible implications in autism
  154. Modular Synthesis of Cyclic Peptidomimetics Inspired by γ-Turns.
  155. Five Possible Isocyanoazulenes and Electron-Rich Complexes Thereof:  A Quantitative Organometallic Approach for Probing Electronic Inhomogeneity of the Azulenic Framework
  156. Orientational Dynamics and Dye-DNA Interactions in a Dye-Labeled DNA Aptamer
  157. Hydrolysis of Phosphorus Esters: A Computational Study
  158. Modular Synthesis of Cyclic Peptidomimetics Inspired by γ-Turns†
  159. Interaction of Phosphonate Analogues of the Tetrahedral Reaction Intermediate with 5-Enolpyruvylshikimate-3-phosphate Synthase in Atomic Detail † , ‡
  160. A Docking Score Function for Estimating Ligand−Protein Interactions:  Application to Acetylcholinesterase Inhibition
  161. The Effective Spin Hamiltonian Concept from a Quantum Chemical Perspective
  162. Ab Initio Calculations of g-Tensors
  163. Organometallic Isocyanocyclopentadienides:  A Combined Synthetic, Spectroscopic, Structural, Electrochemical, and Theoretical Investigation
  164. Utilization of Hydrogen Bonds To Stabilize M−O(H) Units:  Synthesis and Properties of Monomeric Iron and Manganese Complexes with Terminal Oxo and Hydroxo Ligands
  165. Differential Inhibition of Adenylyl Cyclase Isoforms and Soluble Guanylyl Cyclase by Purine and Pyrimidine Nucleotides
  166. Comparison of Thioethers and Sulfoxides as Axial Ligands for N -Acetylmicroperoxidase-8:  Implications for Oxidation of Methionine-80 in Cytochrome c
  167. Ab Initio and Density Functional Study of the Electronic Transitions of Indoline and Indoline-2-Carboxylic Acid
  168. Discovery and Structural Modification of Inhibitors of Methionine Aminopeptidases from Escherichia coli and Saccharomyces cerevisiae
  169. Computational Studies on Acetylcholinesterase: Results from a FY 2002 DoD Challenge Project
  170. First Isocyanoazulene and Its Homoleptic Complexes
  171. Quantum mechanics and mixed quantum mechanics/molecular mechanics simulations of model nerve agents with acetylcholinesterase
  172. First Homoleptic Complexes of Isocyanoferrocene
  173. How the mutation glycine96 to alanine confers glyphosate insensitivity to 5-enolpyruvyl shikimate-3-phosphate synthase from Escherichia coli
  174. Ab initio simulation of physisorption: N2 on pregraphitic clusters
  175. The electron-spin magnetic moment (g-tensor) of H2CO+ according to MRCI calculations
  176. Small Closed-Form CI Expansions for Electronic g-Tensor Calculations
  177. Chemistry and the Internet
  178. Stability, properties and electronic g-tensors of H2CO− as stabilized in H2CO·Na complexes
  179. Multireference configuration interaction calculations of electronicg-tensors for NO2, H2O+, and CO+
  180. Electron‐spin magnetic moments of the 2Σ ions Li2, Li2, and Be2: An ab initio ROHF study
  181. Electron-spin magnetic moments of the2?+ ions Li2+, Li2?, and Be2+: An ab initio ROHF study
  182. Electron-spin g-factors of H2−. An ab initio study
  183. The electronicg-tensor of MgF: A comparison of ROHF and MRD?CI level results
  184. Ab initio study of molecularg-tensors
  185. Configuration interaction study of relativistic corrections to the zeeman effect in diatomic molecules
  186. G-Hash
  187. Defense against chemical warfare agents and toxic industrial chemicals