All Stories

  1. Evidence of Statistical Inconsistency of Phylogenetic Methods in the Presence of Multiple Sequence Alignment Uncertainty

    Article • Genome Biology and Evolution, July 2015, Oxford University Press (OUP)

    Dr Benjamin Patrick Blackburne

  2. ModelOMatic: Fast and Automated Model Selection between RY, Nucleotide, Amino Acid, and Codon Substitution Models

    Article • Systematic Biology, September 2014, Oxford University Press (OUP)

    Dr Benjamin Patrick Blackburne

  3. Class of Multiple Sequence Alignment Algorithm Affects Genomic Analysis

    Article • Molecular Biology and Evolution, November 2012, Oxford University Press (OUP)

    Dr Benjamin Patrick Blackburne

  4. Measuring the distance between multiple sequence alignments

    Article • Bioinformatics, December 2011, Oxford University Press (OUP)

    Dr Benjamin Patrick Blackburne

  5. Phylogenetic Substitution Models for Detecting Heterotachy during Plastid Evolution

    Article • Molecular Biology and Evolution, August 2010, Oxford University Press (OUP)

    Dr Benjamin Patrick Blackburne

  6. Mutation spectrum revealed by breakpoint sequencing of human germline CNVs

    Article • Nature Genetics, April 2010, Nature

    Dr Benjamin Patrick Blackburne

  7. Changing Selective Pressure during Antigenic Changes in Human Influenza H3

    Article • PLoS Pathogens, May 2008, PLOS

    Dr Benjamin Patrick Blackburne

  8. Assessing the Accuracy of Ancestral Protein Reconstruction Methods

    Article • PLoS Computational Biology, January 2006, PLOS

    Dr Benjamin Patrick Blackburne

  9. Population dynamics simulations of functional model proteins

    Article • The Journal of Chemical Physics, October 2005, American Institute of Physics

    Dr Benjamin Patrick Blackburne

  10. Three-dimensional functional model proteins: Structure function and evolution

    Article • The Journal of Chemical Physics, August 2003, American Institute of Physics

    Dr Benjamin Patrick Blackburne

  11. Multimeme Algorithms for Protein Structure Prediction

    Article • January 2002, Springer Science + Business Media

    Dr Benjamin Patrick Blackburne

  12. Evolution of functional model proteins

    Article • The Journal of Chemical Physics, July 2001, American Institute of Physics

    Dr Benjamin Patrick Blackburne