All Stories

  1. Discriminating Bacterial Phenotypes at the Population and Single‐Cell Level: A Comparison of Flow Cytometry and Raman Spectroscopy Fingerprinting

    Article • Cytometry Part A, December 2019, Wiley

    Mr Frederiek-Maarten Kerckhof

  2. Microbial protein production from methane via electrochemical biogas upgrading

    Article • Chemical Engineering Journal, November 2019, Elsevier

    Mr Frederiek-Maarten Kerckhof

  3. Future prospects for dissecting inter-individual variability in the absorption, distribution and elimination of plant bioactives of relevance for cardiometabolic endpoints

    Article • European Journal of Nutrition, October 2019, Springer Science + Business Media

    Mr Frederiek-Maarten Kerckhof

  4. Cytometric fingerprints of gut microbiota predict Crohn’s disease state

    Article • May 2019, Cold Spring Harbor Laboratory Press

    Mr Frederiek-Maarten Kerckhof

  5. PhenoGMM: Gaussian mixture modelling of microbial cytometry data enables efficient predictions of biodiversity

    Article • May 2019, Cold Spring Harbor Laboratory Press

    Mr Frederiek-Maarten Kerckhof

  6. Learning Single‐Cell Distances from Cytometry Data

    Article • Cytometry Part A, May 2019, Wiley

    Mr Frederiek-Maarten Kerckhof

  7. Determining stoichiometry and kinetics of two thermophilic nitrifying communities as a crucial step in the development of thermophilic nitrogen removal

    Article • Water Research, March 2019, Elsevier

    Mr Frederiek-Maarten Kerckhof

  8. Characterizing phenotypic heterogeneity in isogenic bacterial populations using flow cytometry and Raman spectroscopy

    Article • February 2019, Cold Spring Harbor Laboratory Press

    Mr Frederiek-Maarten Kerckhof

  9. Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities

    Article • The ISME Journal, December 2018, Springer Science + Business Media

    Mr Frederiek-Maarten Kerckhof

  10. Mucin Degradation Niche as a Driver of Microbiome Composition and Akkermansia Muciniphila Abundance in a Dynamic Gut Model is Donor Independent

    Article • FEMS Microbiology Ecology, September 2018, Oxford University Press (OUP)

    Mr Frederiek-Maarten Kerckhof

  11. Label-free Raman characterization of bacteria calls for standardized procedures

    Article • Journal of Microbiological Methods, June 2018, Elsevier

    Mr Frederiek-Maarten Kerckhof

  12. Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota

    Article • Scientific Reports, May 2018, Springer Science + Business Media

    Mr Frederiek-Maarten Kerckhof, Prof. em. Mario Vaneechoutte

  13. Microbiological, chemical and sensory spoilage analysis of raw Atlantic cod ( Gadus morhua ) stored under modified atmospheres

    Article • Food Microbiology, April 2018, Elsevier

    Mr Frederiek-Maarten Kerckhof

  14. Initial evenness determines diversity and cell density dynamics in synthetic microbial ecosystems

    Article • Scientific Reports, January 2018, Nature

    Mr Frederiek-Maarten Kerckhof

  15. Functional stabilisation and partner selection during repeated co-culivation in a methanotrophic interactome

    Article • May 2016, PeerJ

    Mr Frederiek-Maarten Kerckhof

  16. Functional stabilisation and partner selection during repeated co-culivation in a methanotrophic interactome

    Article • May 2016, PeerJ

    Mr Frederiek-Maarten Kerckhof

  17. Optimized Cryopreservation of Mixed Microbial Communities for Conserved Functionality and Diversity

    Article • PLoS ONE, June 2014, PLOS

    Professor Peter A Vandamme, Mr Frederiek-Maarten Kerckhof

  18. Exploration and prediction of interactions between methanotrophs and heterotrophs

    Article • Research in Microbiology, December 2013, Elsevier

    Mr Frederiek-Maarten Kerckhof

  19. Characterization of Staphylococcus and Corynebacterium Clusters in the Human Axillary Region

    Article • PLoS ONE, August 2013, PLOS

    Mr Frederiek-Maarten Kerckhof

  20. Conversion of Biogas to Bioproducts by Algae and Methane Oxidizing Bacteria

    Article • Environmental Science & Technology, December 2012, American Chemical Society (ACS)

    Mr Frederiek-Maarten Kerckhof

  21. Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model

    Article • The ISME Journal, December 2012, Nature

    Mr Frederiek-Maarten Kerckhof

  22. Barcoded pyrosequencing analysis of the microbial community in a simulator of the human gastrointestinal tract showed a colon region-specific microbiota modulation for two plant-derived polysaccharide blends

    Article • Antonie van Leeuwenhoek, October 2012, Springer Science + Business Media

    Mr Frederiek-Maarten Kerckhof

  23. Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies

    Article • Environmental Microbiology Reports, August 2012, Wiley

    Mr Frederiek-Maarten Kerckhof

  24. Strain-Specific Transfer of Antibiotic Resistance from an Environmental Plasmid to Foodborne Pathogens

    Article • Journal of Biomedicine and Biotechnology, January 2012, Hindawi Publishing Corporation

    Mr Frederiek-Maarten Kerckhof