All Stories

  1. YeATSAM analysis of the walnut and chickpea transcriptome reveals key genes undetected by current annotation tools

    Article • F1000Research, November 2016, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar

  2. Complete Genome Sequence ofXanthomonas arboricolapv. juglandis 417, a Copper-Resistant Strain Isolated fromJuglans regiaL.

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Abhaya M Dandekar

  3. YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut

    Article • F1000Research, June 2015, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar

  4. Alpha-helical anti-microbial peptides

    Article • F1000Research, December 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  5. Correlating the ability of VP24 protein from Ebola and Marburg viruses to bind human karyopherin to their immune suppression mechanism and pathogenicity using computational methods

    Article • F1000Research, November 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  6. Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions

    Article • F1000Research, October 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  7. PREMONITION - Preprocessing motifs in protein structures for search acceleration

    Article • F1000Research, September 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  8. Directed evolution induces tributyrin hydrolysis in a virulence factor of Xylella fastidiosa using a duplicated gene as a template

    Article • F1000Research, September 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  9. PAGAL - Properties and corresponding graphics of alpha helical structures in proteins

    Article • F1000Research, August 2014, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar

  10. Promiscuous scaffolds in proteins - non-native, non-additive and non-trivial

    Article • F1000Research, November 2013, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson, Professor Jean-Marie A FRERE, Ade Rendon

  11. The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment

    Article • F1000Research, November 2013, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson

  12. Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms

    Article • F1000Research, October 2013, Faculty of 1000, Ltd.

    Professor Abhaya M Dandekar, Mr Bjarni Asgeirsson