All Stories

  1. Pan-genome analysis of six Paracoccus type strain genomes reveal lifestyle traits

    Article • PLoS ONE, December 2023, PLOS

    Professor Rolf Daniel

  2. Down in the pond: Isolation and characterization of a new Serratia marcescens strain (LVF3) from the surface water near frog’s lettuce (Groenlandia densa)

    Article • PLoS ONE, November 2021, PLOS

    Professor Rolf Daniel

  3. Pontibacillus sp. ALD_SL1 and Psychroflexus sp. ALD_RP9, two novel moderately halophilic bacteria isolated from sediment and water from the Aldabra Atoll, Seychelles

    Article • PLoS ONE, August 2021, PLOS

    Professor Rolf Daniel

  4. Primary Production in the Water Column as Major Structuring Element of the Biogeographical Distribution and Function of Archaea in Deep-Sea Sediments of the Central Pacific Ocean

    Article • Archaea, March 2019, Hindawi Publishing Corporation

    Professor Rolf Daniel

  5. Comparative Genomic Analysis of Members of the Genera Methanosphaera and Methanobrevibacter Reveals Distinct Clades with Specific Potential Metabolic Functions

    Article • Archaea, August 2018, Hindawi Publishing Corporation

    Professor Rolf Daniel

  6. Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271

    Article • Genome Announcements, May 2018, ASM Journals

    Professor Rolf Daniel

  7. First Insight into the Genome Sequence of Clostridium liquoris DSM 100320, a Butyrate- and Ethanol-Producing Bacterium

    Article • Genome Announcements, May 2018, ASM Journals

    Professor Rolf Daniel

  8. Draft Genome Sequence of the Butanoic Acid-Producing Bacterium Clostridium luticellarii DSM 29923, Used for Strong Aromatic Chinese Liquor Production

    Article • Genome Announcements, May 2018, ASM Journals

    Professor Rolf Daniel

  9. Draft Genome Sequence of Bacillus sp. Strain M21, Isolated from the Arid Area of Matmata, Tunisia

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  10. Draft Genome Sequences of the Obligatory Marine Myxobacterial Strains Enhygromyxa salina SWB005 and SWB007

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  11. First Insights into the Genome Sequence of Clostridium thermopalmarium DSM 5974, a Butyrate-Producing Bacterium Isolated from Palm Wine

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  12. Draft Genome Sequence of the Thermophilic Acetogen Moorella humiferrea DSM 23265

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  13. Draft Genome Sequence ofKomagataeibacter maltacetiLMG 1529T, a Vinegar-Producing Acetic Acid Bacterium Isolated from Malt Vinegar Brewery Acetifiers

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  14. First Insight into the Genome Sequence of Clostridium vincentii DSM 10228, Isolated from Sediment of the McMurdo Ice Shelf, Antarctica

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  15. Complete Genome Sequence of the Methanococcus maripaludis Type Strain JJ (DSM 2067), a Model for Selenoprotein Synthesis in Archaea

    Article • Genome Announcements, April 2018, ASM Journals

    Professor Rolf Daniel

  16. Complete Genome Sequence of vB_BveP-Goe6, a Virus Infecting Bacillus velezensis FZB42

    Article • Genome Announcements, February 2018, ASM Journals

    Professor Rolf Daniel

  17. Complete Genome Sequences of pLMA1 and pLMA7, Two Large Linear Plasmids of Micrococcus Strains Isolated from a High-Altitude Lake in Argentina

    Article • Genome Announcements, February 2018, ASM Journals

    Professor Rolf Daniel

  18. Preliminary Investigation of Species Diversity of Rice Hopper Parasitoids in Southeast Asia

    Article • Insects, February 2018, MDPI AG

    Professor Rolf Daniel

  19. Draft Genome Sequence of the Endophyte Paenibacillus sp. Strain GM2FR Isolated from Festuca rubra

    Article • Genome Announcements, February 2018, ASM Journals

    Professor Rolf Daniel

  20. Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne

    Article • Genome Announcements, February 2018, ASM Journals

    Professor Rolf Daniel

  21. Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM5LP Isolated from Lolium perenne

    Article • Genome Announcements, January 2018, ASM Journals

    Professor Rolf Daniel

  22. Drylands soil bacterial community is affected by land use change and different irrigation practices in the Mezquital Valley, Mexico

    Article • Scientific Reports, January 2018, Nature

    Professor Rolf Daniel

  23. Cryptic Species Diversity of Rice Hopper Parasitoids in Southeast Asia

    Article • November 2017, MDPI AG

    Professor Rolf Daniel

  24. Linking Compositional and Functional Predictions to Decipher the Biogeochemical Significance in DFAA Turnover of Abundant Bacterioplankton Lineages in the North Sea

    Article • Microorganisms, November 2017, MDPI AG

    Professor Christoph Scherber, Professor Rolf Daniel

  25. Gut bacterial communities of diarrheic patients with indications of Clostridioides difficile infection

    Article • Scientific Data, October 2017, Nature

    Professor Rolf Daniel

  26. Genome Sequence of the Homoacetogenic, Gram-Negative, Endospore-Forming Bacterium Sporomusa acidovorans DSM 3132

    Article • Genome Announcements, September 2017, ASM Journals

    Professor Rolf Daniel

  27. Insights into the Genome of the Anaerobic Acetogen Sporomusa silvacetica DSM 10669

    Article • Genome Announcements, September 2017, ASM Journals

    Professor Rolf Daniel

  28. Draft Genome Sequences of Sphingomonas mucosissima DSM 17494 and Sphingomonas dokdonensis DSM 21029

    Article • Genome Announcements, August 2017, ASM Journals

    Professor Rolf Daniel

  29. Direct and cascading impacts of tropical land-use change on multi-trophic biodiversity

    Article • Nature Ecology & Evolution, August 2017, Nature

    Professor Rolf Daniel

  30. First Insights into the Genome Sequence of Pseudomonas oleovorans DSM 1045

    Article • Genome Announcements, August 2017, ASM Journals

    Professor Karl-Erich Jaeger, Professor Rolf Daniel

  31. Adaptation of Bacillus subtilis to Life at Extreme Potassium Limitation

    Article • mBio, July 2017, ASM Journals

    Professor Rolf Daniel

  32. Forest management and biodiversity

    Article • Journal of Applied Ecology, June 2017, Wiley

    Martin Gossner, Peter Schall, Professor Rolf Daniel

  33. First Insights into the Genome Sequence of Clostridium oryzae DSM 28571, Isolated from the Soil of a Japanese Rice Field

    Article • Genome Announcements, June 2017, ASM Journals

    Professor Rolf Daniel

  34. First Insights into the Genome of the Cr(VI)-Reducing Bacterium Clostridium chromiireducens DSM 23318

    Article • Genome Announcements, June 2017, ASM Journals

    Professor Rolf Daniel

  35. Complete Genome Sequence of the Autotrophic Acetogen Clostridium formicaceticum DSM 92T Using Nanopore and Illumina Sequencing Data

    Article • Genome Announcements, May 2017, ASM Journals

    Professor Rolf Daniel, Dr Frank Robert Bengelsdorf, Professor Peter Dürre

  36. First Insight into the Genome Sequence of Clostridium thermobutyricum DSM 4928, a Butyrate-Producing Moderate Thermophile

    Article • Genome Announcements, May 2017, ASM Journals

    Professor Rolf Daniel

  37. First Insights into the Genome Sequence of the Alkaliphilic Thermotolerant Bacterium Clostridium thermoalcaliphilum JW/YL23-2T

    Article • Genome Announcements, May 2017, ASM Journals

    Professor Rolf Daniel

  38. First Insights into the Genome Sequence of the Cellulolytic Bacterium Clostridium hungatei DSM 14427

    Article • Genome Announcements, May 2017, ASM Journals

    Professor Rolf Daniel

  39. No evidence for a bovine mastitis Escherichia coli pathotype

    Article • BMC Genomics, May 2017, Springer Science + Business Media

    Professor Ulrich Dobrindt, Professor Rolf Daniel

  40. Control of potassium homeostasis is an essential function of the second messenger cyclic di-AMP in Bacillus subtilis

    Article • Science Signaling, April 2017, American Association for the Advancement of Science

    Professor Rolf Daniel

  41. Aquatic adaptation of a laterally acquired pectin degradation pathway in marine gammaproteobacteria

    Article • Environmental Microbiology, April 2017, Wiley

    Professor Rolf Daniel

  42. Complementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea

    Article • Frontiers in Microbiology, March 2017, Frontiers

    Professor Rolf Daniel, Prof. Dr. Bernd Blasius

  43. Bacterial endophyte communities of three agricultural important grass species differ in their response towards management regimes

    Article • Scientific Reports, January 2017, Nature

    Professor Rolf Daniel

  44. Bacillus thuringiensis and Bacillus weihenstephanensis Inhibit the Growth of Phytopathogenic Verticillium Species

    Article • Frontiers in Microbiology, January 2017, Frontiers

    Professor Rolf Daniel

  45. Genome Sequence of Enterococcus faecalis Strain CG_E

    Article • Genome Announcements, January 2017, ASM Journals

    Dr Frank Robert Bengelsdorf, Professor Peter Dürre, Professor Rolf Daniel

  46. Genome Sequence of Lactobacillus sunkii Strain CG_D

    Article • Genome Announcements, January 2017, ASM Journals

    Dr Frank Robert Bengelsdorf, Professor Peter Dürre, Professor Rolf Daniel

  47. Genome Sequence of Uric Acid-Fermenting Eubacterium angustum DSM 1989T (MK-1)

    Article • Genome Announcements, January 2017, ASM Journals

    Professor Rolf Daniel

  48. A novel, versatile family IV carboxylesterase exhibits high stability and activity in a broad pH spectrum

    Article • Biotechnology Letters, January 2017, Springer Science + Business Media

    Professor Rolf Daniel

  49. Contrasting effects of grassland management modes on species-abundance distributions of multiple groups

    Article • Agriculture Ecosystems & Environment, January 2017, Elsevier

    Professor Rolf Daniel

  50. The Draft Genome of the Non-Host-Associated Methanobrevibacter arboriphilus Strain DH1 Encodes a Large Repertoire of Adhesin-Like Proteins

    Article • Archaea, January 2017, Hindawi Publishing Corporation

    Professor Rolf Daniel

  51. No evidence for a bovine mastitis Escherichia coli pathotype

    Article • December 2016, Cold Spring Harbor Laboratory Press

    Professor Rolf Daniel, Professor Ulrich Dobrindt

  52. Genome Sequence of the Acetogenic Bacterium Acetobacterium wieringae DSM 1911 T

    Article • Genome Announcements, December 2016, ASM Journals

    Dr Frank Robert Bengelsdorf, Professor Peter Dürre, Professor Rolf Daniel

  53. Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce

    Article • Frontiers in Microbiology, December 2016, Frontiers

    Professor Rolf Daniel

  54. Reconstruction of the Metabolic Potential of Acidophilic Sideroxydans Strains from the Metagenome of an Microaerophilic Enrichment Culture of Acidophilic Iron-Oxidizing Bacteria from a Pilot Plant for the Treatment of Acid Mine Drainage Reveals Metabol...

    Article • Frontiers in Microbiology, December 2016, Frontiers

    Professor Rolf Daniel

  55. Genome Sequence of the Poly-3-Hydroxybutyrate Producer Clostridium acetireducens DSM 10703

    Article • Genome Announcements, December 2016, ASM Journals

    Professor Peter Dürre, Professor Rolf Daniel

  56. Genome and Proteome Analysis of Rhodococcus erythropolis MI2: Elucidation of the 4,4´-Dithiodibutyric Acid Catabolism

    Article • PLoS ONE, December 2016, PLOS

    Professor Rolf Daniel

  57. Large-scale reduction of theBacillus subtilisgenome: consequences for the transcriptional network, resource allocation, and metabolism

    Article • Genome Research, December 2016, Cold Spring Harbor Laboratory Press

    Professor Rolf Daniel

  58. Genetic Variability of Myxoma Virus Genomes

    Article • Journal of Virology, November 2016, ASM Journals

    Prof. Claus P Czerny, Professor Rolf Daniel

  59. Construction of Small-Insert and Large-Insert Metagenomic Libraries

    Article • November 2016, Springer Science + Business Media

    Professor Rolf Daniel

  60. Function-Based Metagenomic Library Screening and Heterologous Expression Strategy for Genes Encoding Phosphatase Activity

    Article • November 2016, Springer Science + Business Media

    Professor Rolf Daniel

  61. Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum

    Article • Frontiers in Microbiology, October 2016, Frontiers

    Professor Rolf Daniel

  62. Nitrogen fixation in a chemoautotrophic lucinid symbiosis

    Article • Nature Microbiology, October 2016, Nature

    Professor Rolf Daniel

  63. Land-use choices follow profitability at the expense of ecological functions in Indonesian smallholder landscapes

    Article • Nature Communications, October 2016, Nature

    Professor Rolf Daniel

  64. Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests

    Article • Scientific Reports, September 2016, Nature

    Professor Rolf Daniel

  65. Genome Sequence of the Facultative AnaerobeOerskovia enterophilaDFA-19 (DSM 43852T)

    Article • Genome Announcements, September 2016, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  66. Role of Wax Ester Synthase/Acyl Coenzyme A:Diacylglycerol Acyltransferase in Oleaginous Streptomyces sp. Strain G25

    Article • Applied and Environmental Microbiology, July 2016, ASM Journals

    Professor Rolf Daniel

  67. Whole-Genome Draft Sequences of Six Commensal Fecal and Six Mastitis-Associated Escherichia coli Strains of Bovine Origin: TABLE 1

    Article • Genome Announcements, July 2016, ASM Journals

    Professor Ulrich Dobrindt, Professor Rolf Daniel

  68. Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain ∆6

    Article • Genome Announcements, July 2016, ASM Journals

    Professor Rolf Daniel

  69. Industrial Acetogenic Biocatalysts: A Comparative Metabolic and Genomic Analysis

    Article • Frontiers in Microbiology, July 2016, Frontiers

    Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  70. Genome Sequence of the Autotrophic Acetogen Clostridium magnum DSM 2767

    Article • Genome Announcements, June 2016, ASM Journals

    Professor Rolf Daniel

  71. Metagenomic discovery of novel enzymes and biosurfactants in a slaughterhouse biofilm microbial community

    Article • Scientific Reports, June 2016, Nature

    Professor Rolf Daniel

  72. Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies

    Article • Biotechnology for Biofuels, June 2016, Springer Science + Business Media

    Professor Rolf Daniel

  73. Gene Loss and Horizontal Gene Transfer Contributed to the Genome Evolution of the Extreme Acidophile “Ferrovum”

    Article • Frontiers in Microbiology, May 2016, Frontiers

    Professor Rolf Daniel

  74. First Insights into the Genome Sequence of the Halophilic Archaeon Halalkalicoccus paucihalophilus (DSM 24557)

    Article • Genome Announcements, May 2016, ASM Journals

    Professor Rolf Daniel

  75. First Insights into the Draft Genome ofClostridium colicanisDSM 13634, Isolated from Canine Feces

    Article • Genome Announcements, May 2016, ASM Journals

    Professor Rolf Daniel

  76. A Terpene Synthase Is Involved in the Synthesis of the Volatile Organic Compound Sodorifen of Serratia plymuthica 4Rx13

    Article • Frontiers in Microbiology, May 2016, Frontiers

    Professor Rolf Daniel

  77. Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage

    Article • Nature Microbiology, May 2016, Nature

    Professor Rolf Daniel

  78. Draft Genome Sequence ofCutaneotrichosporon curvatus DSM 101032 (FormerlyCryptococcus curvatus), an Oleaginous Yeast Producing Polyunsaturated Fatty Acids

    Article • Genome Announcements, May 2016, ASM Journals

    Professor Rolf Daniel

  79. First Insights into the Genome of the Moderately Thermophilic Bacterium Clostridium tepidiprofundi SG 508 T

    Article • Genome Announcements, May 2016, ASM Journals

    Professor Rolf Daniel

  80. Draft Genome Sequence of the Strict Anaerobe Clostridium neopropionicum X4 (DSM 3847 T )

    Article • Genome Announcements, April 2016, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  81. Complete Genome Sequence of the Amino Acid-FermentingClostridium propionicumX2 (DSM 1682)

    Article • Genome Announcements, April 2016, ASM Journals

    Professor Rolf Daniel

  82. Impact of grassland management regimes on bacterial endophyte diversity differs with grass species

    Article • Letters in Applied Microbiology, March 2016, Wiley

    Professor Rolf Daniel

  83. Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed

    Article • Applied and Environmental Microbiology, February 2016, ASM Journals

    Professor Rolf Daniel

  84. Trophic and Non-Trophic Interactions in a Biodiversity Experiment Assessed by Next-Generation Sequencing

    Article • PLoS ONE, February 2016, PLOS

    Professor Christoph Scherber, Professor Rolf Daniel

  85. Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna

    Article • Standards in Genomic Sciences, February 2016, Springer Science + Business Media

    Professor Rolf Daniel

  86. Genome Analysis of the Biotechnologically Relevant Acidophilic Iron Oxidising Strain JA12 Indicates Phylogenetic and Metabolic Diversity within the Novel Genus “Ferrovum”

    Article • PLoS ONE, January 2016, PLOS

    Professor Rolf Daniel

  87. Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system

    Article • The ISME Journal, January 2016, Nature

    Professor Rolf Daniel

  88. Effects of Halide Ions on the Carbamidocyclophane Biosynthesis in Nostoc sp. CAVN2

    Article • Marine Drugs, January 2016, MDPI AG

    Professor Rolf Daniel

  89. Effects of Fertilization and Sampling Time on Composition and Diversity of Entire and Active Bacterial Communities in German Grassland Soils

    Article • PLoS ONE, December 2015, PLOS

    Professor Rolf Daniel

  90. Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia)

    Article • Frontiers in Microbiology, December 2015, Frontiers

    Professor Rolf Daniel

  91. Genome Sequence of the Acetogenic Bacterium Oxobacter pfennigii DSM 3222 T

    Article • Genome Announcements, December 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  92. Distinct compositions of free-living, particle-associated and benthic communities of the Roseobacter group in the North Sea

    Article • FEMS Microbiology Ecology, November 2015, Oxford University Press (OUP)

    Professor Rolf Daniel

  93. Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna

    Article • Standards in Genomic Sciences, November 2015, Springer Science + Business Media

    Professor Rolf Daniel

  94. Comparative Genomics Underlines the Functional and Taxonomic Diversity of Novel “Ferrovum” Related Iron Oxidizing Bacteria

    Article • Advanced Materials Research, November 2015, Trans Tech Publications

    Professor Rolf Daniel, Dr Martin Muhling, Judith Tischler

  95. Draft Genome Sequence of Komagataeibacter europaeus CECT 8546, a Cellulose-Producing Strain of Vinegar Elaborated by the Traditional Method

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Rolf Daniel

  96. Mutations improving production and secretion of extracellular lipase by Burkholderia glumae PG1

    Article • Applied Microbiology and Biotechnology, October 2015, Springer Science + Business Media

    Professor Rolf Daniel

  97. Complete Genome Sequence of the Acetogenic BacteriumMoorella thermoaceticaDSM 2955T

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  98. Complete Genome Sequence of the Type Strain of the Acetogenic BacteriumMoorella thermoaceticaDSM 521T

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  99. Complete Genome Sequence of the Clostridium difficile Type Strain DSM 1296 T

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Rolf Daniel

  100. Draft Genome Sequence of the Strict AnaerobeClostridium homopropionicumLuHBu1 (DSM 5847)

    Article • Genome Announcements, October 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  101. Draft Genome Sequence of Purine-DegradingGottschalkia purinilyticum(FormerlyClostridium purinilyticum) WA1 (DSM 1384)

    Article • Genome Announcements, September 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  102. Draft Genome Sequence of Roseovarius tolerans EL-164, a Producer of N -Acylated Alanine Methyl Esters and N -Acylhomoserine Lactones

    Article • Genome Announcements, September 2015, ASM Journals

    Professor Rolf Daniel, Dr. Stefan Schulz

  103. Genome-Wide RNA Sequencing Analysis of Quorum Sensing-Controlled Regulons in the Plant-Associated Burkholderia glumae PG1 Strain

    Article • Applied and Environmental Microbiology, September 2015, ASM Journals

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  104. Closed Genome Sequence of Octadecabacter temperatus SB1, the First Mesophilic Species of the Genus Octadecabacter

    Article • Genome Announcements, September 2015, ASM Journals

    Professor Rolf Daniel

  105. The Complete Genome Sequence of Clostridium aceticum: a Missing Link between Rnf- and Cytochrome-Containing Autotrophic Acetogens

    Article • mBio, September 2015, ASM Journals

    Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  106. The genome of Variovorax paradoxus strain TBEA6 provides new understandings for the catabolism of 3,3′-thiodipropionic acid and hence the production of polythioesters

    Article • Journal of Biotechnology, September 2015, Elsevier

    Professor Rolf Daniel

  107. Complete Genome Sequence of the Nonpathogenic Soil-Dwelling BacteriumClostridium sporogenesStrain NCIMB 10696

    Article • Genome Announcements, August 2015, ASM Journals

    Professor Rolf Daniel

  108. Permanent draft genome sequence of Acidiphilium sp. JA12-A1

    Article • Standards in Genomic Sciences, August 2015, Springer Science + Business Media

    Professor Rolf Daniel

  109. Draft Genome Sequence of Purine-DegradingClostridium cylindrosporumHC-1 (DSM 605)

    Article • Genome Announcements, August 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  110. The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches

    Article • Frontiers in Microbiology, August 2015, Frontiers

    Professor Rolf Daniel

  111. Genome Sequence of the Moderately Acidophilic Sulfate-Reducing FirmicuteDesulfosporosinus acididurans(Strain M1T)

    Article • Genome Announcements, August 2015, ASM Journals

    Dr Martin Muhling, Professor Rolf Daniel

  112. Genome Sequence of the Acidophilic Sulfate-Reducing Peptococcaceae Strain CEB3

    Article • Genome Announcements, August 2015, ASM Journals

    Dr Martin Muhling, Professor Rolf Daniel

  113. First Insights into the Genome of Fructobacillus sp. EFB-N1, Isolated from Honey Bee Larva Infected with European Foulbrood

    Article • Genome Announcements, July 2015, ASM Journals

    Professor Rolf Daniel

  114. Genome sequence of Clostridium sporogenes DSM 795T, an amino acid-degrading, nontoxic surrogate of neurotoxin-producing Clostridium botulinum

    Article • Standards in Genomic Sciences, July 2015, Springer Science + Business Media

    Professor Rolf Daniel

  115. Complete Genome Sequence of Rnf- and Cytochrome-Containing Autotrophic Acetogen Clostridium aceticum DSM 1496

    Article • Genome Announcements, July 2015, ASM Journals

    Professor Peter Dürre, Dr Frank Robert Bengelsdorf, Professor Rolf Daniel

  116. Functional Screening of Hydrolytic Activities Reveals an Extremely Thermostable Cellulase from a Deep-Sea Archaeon

    Article • Frontiers in Bioengineering and Biotechnology, July 2015, Frontiers

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  117. Complete Genome Sequence of the Linear Plasmid pJD12 Hosted by Micrococcus sp. D12, Isolated from a High-Altitude Volcanic Lake in Argentina

    Article • Genome Announcements, June 2015, ASM Journals

    Professor Rolf Daniel

  118. Host–Pathogen Coevolution: The Selective Advantage of Bacillus thuringiensis Virulence and Its Cry Toxin Genes

    Article • PLoS Biology, June 2015, PLOS

    Professor Rolf Daniel

  119. Complete genome sequence of the lipase producing strain Burkholderia glumae PG1

    Article • Journal of Biotechnology, June 2015, Elsevier

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  120. Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data: Fig. 1.

    Article • Bioinformatics, May 2015, Oxford University Press (OUP)

    Professor Rolf Daniel

  121. Engineering Bacillus subtilis for the conversion of the antimetabolite 4-hydroxy-l-threonine to pyridoxine

    Article • Metabolic Engineering, May 2015, Elsevier

    Professor Rolf Daniel

  122. Genome Sequence of the Acidophilic Ferrous Iron-Oxidizing IsolateAcidithrix ferrooxidansStrain Py-F3, the Proposed Type Strain of the Novel Actinobacterial GenusAcidithrix

    Article • Genome Announcements, April 2015, ASM Journals

    Professor Rolf Daniel

  123. Genome Sequence of the Acidophilic Iron Oxidizer Ferrimicrobium acidiphilum Strain T23 T

    Article • Genome Announcements, April 2015, ASM Journals

    Professor Rolf Daniel

  124. First Insights into the Genome of the N -Methylhydantoin-Degrading Clostridium sp. Strain FS41 (DSM 6877)

    Article • Genome Announcements, April 2015, ASM Journals

    Professor Rolf Daniel

  125. Genome Sequence of Jannaschia aquimarina GSW-M26, a Member of the Roseobacter Clade

    Article • Genome Announcements, April 2015, ASM Journals

    Professor Rolf Daniel

  126. Genome Resequencing of the Virulent and Multidrug-Resistant Reference StrainClostridium difficile630

    Article • Genome Announcements, April 2015, ASM Journals

    Professor Rolf Daniel

  127. Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans

    Article • Environmental Microbiology, April 2015, Wiley

    Professor Rolf Daniel

  128. Draft Genome Sequence of the Phenazine-Producing Pseudomonas fluorescens Strain 2-79

    Article • Genome Announcements, March 2015, ASM Journals

    Professor Rolf Daniel, Isabel Maurus

  129. Draft Genome Sequence of the Beneficial Rhizobacterium Pseudomonas fluorescens DSM 8569, a Natural Isolate of Oilseed Rape (Brassica napus)

    Article • Genome Announcements, March 2015, ASM Journals

    Professor Rolf Daniel, Isabel Maurus

  130. Complete Genome Sequences of Escherichia coli Strains 1303 and ECC-1470 Isolated from Bovine Mastitis

    Article • Genome Announcements, March 2015, ASM Journals

    Professor Ulrich Dobrindt, Professor Rolf Daniel

  131. Metagenomic and Metatranscriptomic Analyses of Bacterial Communities Derived From a Calcifying Karst Water Creek Biofilm and Tufa

    Article • Geomicrobiology Journal, March 2015, Taylor & Francis

    Professor Rolf Daniel

  132. Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain 3NA

    Article • Genome Announcements, March 2015, ASM Journals

    Professor Rolf Daniel

  133. Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40

    Article • BMC Genomics, March 2015, Springer Science + Business Media

    Professor Rolf Daniel

  134. Complete Genome Sequence of the Urethral Catheter Isolate Myroides sp. A21

    Article • Genome Announcements, March 2015, ASM Journals

    Professor Rolf Daniel

  135. Complete Genome Sequence of the Nitrogen-Fixing and Solvent-Producing Clostridium pasteurianum DSM 525

    Article • Genome Announcements, February 2015, ASM Journals

    Professor Rolf Daniel

  136. Closed Genome Sequence of Clostridium pasteurianum ATCC 6013

    Article • Genome Announcements, February 2015, ASM Journals

    Professor Rolf Daniel

  137. Schlüsseltechnologie der Lebenswissenschaften

    Article • BIOspektrum, February 2015, Springer Science + Business Media

    Professor Rolf Daniel

  138. High quality draft genome of Lactobacillus kunkeei EFB6, isolated from a German European foulbrood outbreak of honeybees

    Article • Standards in Genomic Sciences, January 2015, Springer Science + Business Media

    Professor Rolf Daniel

  139. Calcium dynamics in microbialite-forming exopolymer-rich mats on the atoll of Kiritimati, Republic of Kiribati, Central Pacific

    Article • Geobiology, December 2014, Wiley

    Professor Rolf Daniel

  140. New Mode of Energy Metabolism in the Seventh Order of Methanogens as Revealed by Comparative Genome Analysis of “Candidatus Methanoplasma termitum”

    Article • Applied and Environmental Microbiology, December 2014, ASM Journals

    Andreas Brune, Professor Rolf Daniel

  141. Cell physiology of the biotechnological relevant bacterium Bacillus pumilus—An omics-based approach

    Article • Journal of Biotechnology, December 2014, Elsevier

    Professor Rolf Daniel

  142. Complete Genome Sequence of the Solvent Producer Clostridium saccharoperbutylacetonicum Strain DSM 14923

    Article • Genome Announcements, October 2014, ASM Journals

    Professor Rolf Daniel

  143. Analysis and comparative genomics of ICEMh1, a novel integrative and conjugative element (ICE) of Mannheimia haemolytica

    Article • Journal of Antimicrobial Chemotherapy, September 2014, Oxford University Press (OUP)

    Professor Stefan Schwarz, Professor Rolf Daniel

  144. Draft Genome Sequence of Serratia sp. Strain DD3, Isolated from the Guts of Daphnia magna

    Article • Genome Announcements, September 2014, ASM Journals

    Professor Rolf Daniel

  145. A Comparative Metagenome Survey of the Fecal Microbiota of a Breast- and a Plant-Fed Asian Elephant Reveals an Unexpectedly High Diversity of Glycoside Hydrolase Family Enzymes

    Article • PLoS ONE, September 2014, PLOS

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  146. Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses

    Article • The ISME Journal, August 2014, Nature

    Professor Rolf Daniel

  147. First Insights into the Genome of the Amino Acid-Metabolizing Bacterium Clostridium litorale DSM 5388

    Article • Genome Announcements, July 2014, ASM Journals

    Professor Rolf Daniel

  148. Paenilarvins: Iturin Family Lipopeptides from the Honey Bee PathogenPaenibacillus larvae

    Article • ChemBioChem, July 2014, Wiley

    Professor Rolf Daniel

  149. Microbial community composition and dynamics in high-temperature biogas reactors using industrial bioethanol waste as substrate

    Article • Applied Microbiology and Biotechnology, July 2014, Springer Science + Business Media

    Professor Rolf Daniel

  150. Wastewater Irrigation Increases the Abundance of Potentially Harmful Gammaproteobacteria in Soils in Mezquital Valley, Mexico

    Article • Applied and Environmental Microbiology, June 2014, ASM Journals

    Professor Rolf Daniel

  151. Complete Genome Sequence of Amino Acid-Utilizing Eubacterium acidaminophilum al-2 (DSM 3953)

    Article • Genome Announcements, June 2014, ASM Journals

    Professor Rolf Daniel

  152. Screening of Metagenomic and Genomic Libraries Reveals Three Classes of Bacterial Enzymes That Overcome the Toxicity of Acrylate

    Article • PLoS ONE, May 2014, PLOS

    Professor Rolf Daniel

  153. Full-Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas protegens CHA0

    Article • Genome Announcements, April 2014, ASM Journals

    Dr Alexandre Jousset, Professor Rolf Daniel

  154. Insights into the Microbial Degradation of Rubber and Gutta-Percha by Analysis of the Complete Genome of Nocardia nova SH22a

    Article • Applied and Environmental Microbiology, April 2014, ASM Journals

    Professor Rolf Daniel

  155. Unravelling the complete genome sequence of Advenella mimigardefordensis strain DPN7T and novel insights in the catabolism of the xenobiotic polythioester precursor 3,3'-dithiodipropionate

    Article • Microbiology, April 2014, Society for General Microbiology

    Professor Rolf Daniel

  156. How to Kill the Honey Bee Larva: Genomic Potential and Virulence Mechanisms of Paenibacillus larvae

    Article • PLoS ONE, March 2014, PLOS

    Professor Rolf Daniel

  157. Land Use Type Significantly Affects Microbial Gene Transcription in Soil

    Article • Microbial Ecology, February 2014, Springer Science + Business Media

    Professor Rolf Daniel

  158. VOC emission of various Serratia species and isolates and genome analysis of Serratia plymuthica 4Rx13

    Article • FEMS Microbiology Letters, January 2014, Oxford University Press (OUP)

    Professor Rolf Daniel

  159. A genome-guided analysis of energy conservation in the thermophilic, cytochrome-free acetogenic bacterium Thermoanaerobacter kivui

    Article • BMC Genomics, January 2014, Springer Science + Business Media

    Professor Rolf Daniel

  160. Interannual variation in land-use intensity enhances grassland multidiversity

    Article • Proceedings of the National Academy of Sciences, December 2013, Proceedings of the National Academy of Sciences

    Professor Christoph Scherber, Professor Rolf Daniel

  161. Draft Genome Sequence of the Methanotrophic Gammaproteobacterium Methyloglobulus morosus DSM 22980 Strain KoM1

    Article • Genome Announcements, December 2013, ASM Journals

    Professor Rolf Daniel

  162. Genome-guided insights into the versatile metabolic capabilities of the mercaptosuccinate-utilizing β-proteobacteriumVariovorax paradoxusstrain B4

    Article • Environmental Microbiology, December 2013, Wiley

    Professor Rolf Daniel

  163. Legionella oakridgensis ATCC 33761 genome sequence and phenotypic characterization reveals its replication capacity in amoebae

    Article • International Journal of Medical Microbiology, December 2013, Elsevier

    Professor Rolf Daniel

  164. Complete Genome Sequence of pAP13, a Large Linear Plasmid of a Brevibacterium Strain Isolated from a Saline Lake at 4,200 Meters above Sea Level in Argentina

    Article • Genome Announcements, November 2013, ASM Journals

    Professor Rolf Daniel

  165. First Complete Sequence of a Giant Linear Plasmid from a Micrococcus Strain Isolated from an Extremely High-Altitude Lake

    Article • Genome Announcements, November 2013, ASM Journals

    Professor Rolf Daniel

  166. Complete Genome Sequence of the Solvent Producer Clostridium saccharobutylicum NCP262 (DSM 13864)

    Article • Genome Announcements, November 2013, ASM Journals

    Professor Rolf Daniel

  167. Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches

    Article • FEMS Microbiology Ecology, October 2013, Oxford University Press (OUP)

    Professor Rolf Daniel

  168. Leaf litter is the main driver for changes in bacterial community structures in the rhizosphere of ash and beech

    Article • Applied Soil Ecology, October 2013, Elsevier

    Professor Rolf Daniel

  169. Physiological, Genomic, and Proteomic Characterization of New “Ferrovum” Strains Obtained from a Pilot Plant for Mine-Water Treatment

    Article • Advanced Materials Research, October 2013, Trans Tech Publications

    Professor Rolf Daniel

  170. Predicting the Metabolic Potential of the Novel Iron Oxidising Bacterium "Ferrovum" sp. JA12 Using Comparative Genomics

    Article • Advanced Materials Research, October 2013, Trans Tech Publications

    Professor Rolf Daniel

  171. Complete Genome Sequence of Staphylococcus aureus 6850, a Highly Cytotoxic and Clinically Virulent Methicillin-Sensitive Strain with Distant Relatedness to Prototype Strains

    Article • Genome Announcements, September 2013, ASM Journals

    Professor Rolf Daniel

  172. First Insights into the Genome of the Gram-Negative, Endospore-Forming Organism Sporomusa ovata Strain H1 DSM 2662

    Article • Genome Announcements, September 2013, ASM Journals

    Professor Rolf Daniel

  173. N-Acylated Alanine Methyl Esters (NAMEs) fromRoseovarius tolerans, Structural Analogs of Quorum-Sensing Autoinducers,N-Acylhomoserine Lactones

    Article • Chemistry & Biodiversity, September 2013, Wiley

    Professor Rolf Daniel, Dr. Stefan Schulz

  174. Size unlimited markerless deletions by a transconjugative plasmid-system in Bacillus licheniformis

    Article • Journal of Biotechnology, September 2013, Elsevier

    Professor Rolf Daniel

  175. Metagenome Survey of a Multispecies and Alga-Associated Biofilm Revealed Key Elements of Bacterial-Algal Interactions in Photobioreactors

    Article • Applied and Environmental Microbiology, August 2013, ASM Journals

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  176. First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A

    Article • Genome Announcements, August 2013, ASM Journals

    Professor Rolf Daniel

  177. Planktomarina temperata gen. nov., sp. nov., belonging to the globally distributed RCA cluster of the marine Roseobacter clade, isolated from the German Wadden Sea

    Article • INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, June 2013, Society for General Microbiology

    Professor Rolf Daniel

  178. Phylogenetic Analysis of a Microbialite-Forming Microbial Mat from a Hypersaline Lake of the Kiritimati Atoll, Central Pacific

    Article • PLoS ONE, June 2013, PLOS

    Professor Rolf Daniel

  179. Roots from beech (Fagus sylvatica L.) and ash (Fraxinus excelsior L.) differentially affect soil microorganisms and carbon dynamics

    Article • Soil Biology and Biochemistry, June 2013, Elsevier

    Professor Rolf Daniel

  180. Complete Genome Sequence of Mannheimia haemolytica Strain 42548 from a Case of Bovine Respiratory Disease

    Article • Genome Announcements, May 2013, ASM Journals

    Professor Stefan Schwarz, Professor Rolf Daniel

  181. High abundance of heterotrophic prokaryotes in hydrothermal springs of the Azores as revealed by a network of 16S rRNA gene-based methods

    Article • World Journal of Surgery, May 2013, Springer Science + Business Media

    Professor Rolf Daniel

  182. Draft Genome Sequence of Desulfotignum phosphitoxidans DSM 13687 Strain FiPS-3

    Article • Genome Announcements, May 2013, ASM Journals

    Professor Rolf Daniel

  183. Poles Apart: Arctic and Antarctic Octadecabacter strains Share High Genome Plasticity and a New Type of Xanthorhodopsin

    Article • PLoS ONE, May 2013, PLOS

    Professor Rolf Daniel

  184. Complete Genome Sequence of Geobacillus sp. Strain GHH01, a Thermophilic Lipase-Secreting Bacterium

    Article • Genome Announcements, April 2013, ASM Journals

    Professor Rolf Daniel

  185. Complete Genome Sequence of Clostridium stercorarium subsp. stercorarium Strain DSM 8532, a Thermophilic Degrader of Plant Cell Wall Fibers

    Article • Genome Announcements, March 2013, ASM Journals

    Professor Rolf Daniel

  186. The Janthinobacterium sp. HH01 Genome Encodes a Homologue of the V. cholerae CqsA and L. pneumophila LqsA Autoinducer Synthases

    Article • PLoS ONE, February 2013, PLOS

    Professor Melanie Blokesch, Professor Helge B Bode, Professor Wolfgang R. Streit, Professor Rolf Daniel

  187. Bacteriohopanepolyols in a stratified cyanobacterial mat from Kiritimati (Christmas Island, Kiribati)

    Article • Organic Geochemistry, February 2013, Elsevier

    Professor Rolf Daniel

  188. Characterization and optimization of Bacillus subtilis ATCC 6051 as an expression host

    Article • Journal of Biotechnology, January 2013, Elsevier

    Professor Rolf Daniel

  189. Fermentation stage-dependent adaptations of Bacillus licheniformis during enzyme production

    Article • Microbial Cell Factories, January 2013, Springer Science + Business Media

    Professor Rolf Daniel

  190. Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans

    Article • BMC Genomics, January 2013, Springer Science + Business Media

    Professor Rolf Daniel

  191. Microbial Diversity and Biochemical Potential Encoded by Thermal Spring Metagenomes Derived from the Kamchatka Peninsula

    Article • Archaea, January 2013, Hindawi Publishing Corporation

    Professor Rolf Daniel

  192. RNA-Seq of Bacillus licheniformis: active regulatory RNA features expressed within a productive fermentation

    Article • BMC Genomics, January 2013, Springer Science + Business Media

    Professor Rolf Daniel

  193. Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

    Article • BMC Genomics, January 2013, Springer Science + Business Media

    Professor Rolf Daniel

  194. The Anaerobic Way of Life

    Article • January 2013, Springer Science + Business Media

    Professor Rolf Daniel

  195. The Purine-Utilizing Bacterium Clostridium acidurici 9a: A Genome-Guided Metabolic Reconsideration

    Article • PLoS ONE, December 2012, PLOS

    Professor Rolf Daniel

  196. Genome Sequence of Paenibacillus alvei DSM 29, a Secondary Invader during European Foulbrood Outbreaks

    Article • Journal of Bacteriology, October 2012, ASM Journals

    Professor Rolf Daniel

  197. The genome of the ammonia-oxidizingCandidatusNitrososphaera gargensis: insights into metabolic versatility and environmental adaptations

    Article • Environmental Microbiology, October 2012, Wiley

    Professor Wolfgang R. Streit, Professor Rolf Daniel, Prof. Dr. Dr. h.c. Michael Wagner

  198. General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types

    Article • PLoS ONE, August 2012, PLOS

    Professor Rolf Daniel

  199. Complete Genome Sequence of the B12-Producing Shimwellia blattae Strain DSM 4481, Isolated from a Cockroach

    Article • Journal of Bacteriology, July 2012, ASM Journals

    Professor Rolf Daniel

  200. Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257

    Article • Journal of Bacteriology, July 2012, ASM Journals

    Professor Rolf Daniel

  201. Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities

    Article • Ecology and Evolution, July 2012, Wiley

    Professor Rolf Daniel

  202. Aerobic and anaerobic methane oxidation in terrestrial mud volcanoes in the Northern Apennines

    Article • Sedimentary Geology, July 2012, Elsevier

    Professor Rolf Daniel

  203. Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life

    Article • The ISME Journal, June 2012, Nature

    Professor Rolf Daniel

  204. An Ancient Pathway Combining Carbon Dioxide Fixation with the Generation and Utilization of a Sodium Ion Gradient for ATP Synthesis

    Article • PLoS ONE, March 2012, PLOS

    Professor Rolf Daniel

  205. Diversity Measures in Environmental Sequences Are Highly Dependent on Alignment Quality—Data from ITS and New LSU Primers Targeting Basidiomycetes

    Article • PLoS ONE, February 2012, PLOS

    Professor Rolf Daniel

  206. Involvement of Two Latex-Clearing Proteins during Rubber Degradation and Insights into the Subsequent Degradation Pathway Revealed by the Genome Sequence of Gordonia polyisoprenivorans Strain VH2

    Article • Applied and Environmental Microbiology, February 2012, ASM Journals

    Professor Rolf Daniel

  207. The inhibiting effect of nitrate fertilisation on methane uptake of a temperate forest soil is influenced by labile carbon

    Article • Biology and Fertility of Soils, January 2012, Springer Science + Business Media

    Professor Rolf Daniel

  208. Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a

    Article • BMC Genomics, January 2012, Springer Science + Business Media

    Professor Rolf Daniel

  209. Genome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeum

    Article • BMC Genomics, January 2012, Springer Science + Business Media

    Professor Rolf Daniel

  210. RNA-Based Assessment of Diversity and Composition of Active Archaeal Communities in the German Bight

    Article • Archaea, January 2012, Hindawi Publishing Corporation

    Professor Rolf Daniel

  211. Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria

    Article • The ISME Journal, December 2011, Nature

    Professor Rolf Daniel

  212. Identification and characterization of novel cellulolytic and hemicellulolytic genes and enzymes derived from German grassland soil metagenomes

    Article • Biotechnology Letters, December 2011, Springer Science + Business Media

    Professor Rolf Daniel

  213. Soil-Based Metagenomics

    Article • November 2011, Wiley

    Professor Rolf Daniel

  214. A Novel Metagenomic Short-Chain Dehydrogenase/Reductase Attenuates Pseudomonas aeruginosa Biofilm Formation and Virulence on Caenorhabditis elegans

    Article • PLoS ONE, October 2011, PLOS

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  215. Physiological homogeneity among the endosymbionts of Riftia pachyptila and Tevnia jerichonana revealed by proteogenomics

    Article • The ISME Journal, October 2011, Nature

    Professor Rolf Daniel

  216. ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: analysis of the regions that comprise 12 antimicrobial resistance genes

    Article • Journal of Antimicrobial Chemotherapy, October 2011, Oxford University Press (OUP)

    Professor Stefan Schwarz, Professor Rolf Daniel

  217. ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer

    Article • Journal of Antimicrobial Chemotherapy, October 2011, Oxford University Press (OUP)

    Professor Stefan Schwarz, Professor Rolf Daniel

  218. Genome Sequence of Brevibacillus laterosporus LMG 15441, a Pathogen of Invertebrates

    Article • Journal of Bacteriology, September 2011, ASM Journals

    Professor Rolf Daniel

  219. Complete Genome Sequences of the Chemolithoautotrophic Oligotropha carboxidovorans Strains OM4 and OM5

    Article • Journal of Bacteriology, July 2011, ASM Journals

    Professor Rolf Daniel

  220. Complete Genome Sequence of the Type Strain Cupriavidus necator N-1

    Article • Journal of Bacteriology, July 2011, ASM Journals

    Professor Rolf Daniel

  221. Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)

    Article • Archives of Microbiology, June 2011, Springer Science + Business Media

    Professor Rolf Daniel

  222. Status quo in physiological proteomics of the uncultured Riftia pachyptila endosymbiont

    Article • PROTEOMICS, June 2011, Wiley

    Professor Rolf Daniel

  223. Comparative Genomics and Transcriptomics of Propionibacterium acnes

    Article • PLoS ONE, June 2011, PLOS

    Professor Mogens Kilian, Professor Rolf Daniel

  224. Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis

    Article • BMC Genomics, June 2011, Springer Science + Business Media

    Professor Rolf Daniel

  225. Complete Genome Sequence of Carnobacterium sp. 17-4

    Article • Journal of Bacteriology, May 2011, ASM Journals

    Professor Rolf Daniel

  226. Gene Prediction in Metagenomic Fragments with Orphelia: A Large-Scale Machine Learning Approach

    Article • May 2011, Wiley

    Professor Rolf Daniel

  227. Identification of novel lipolytic genes and gene families by screening of metagenomic libraries derived from soil samples of the German Biodiversity Exploratories

    Article • FEMS Microbiology Ecology, April 2011, Oxford University Press (OUP)

    Professor Rolf Daniel

  228. Molecular Basis of Macrolide, Triamilide, and Lincosamide Resistance in Pasteurella multocida from Bovine Respiratory Disease

    Article • Antimicrobial Agents and Chemotherapy, March 2011, ASM Journals

    Professor Stefan Schwarz, Professor Rolf Daniel

  229. Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils

    Article • PLoS ONE, February 2011, PLOS

    Professor Rolf Daniel

  230. Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01

    Article • BMC Genomics, January 2011, Springer Science + Business Media

    Professor Rolf Daniel

  231. Metagenomic Analyses: Past and Future Trends

    Article • Applied and Environmental Microbiology, December 2010, ASM Journals

    Professor Rolf Daniel

  232. Genomic features and insights into the biology of Mycoplasma fermentans

    Article • Microbiology, November 2010, Society for General Microbiology

    Professor Rolf Daniel

  233. Genome Sequence of the Polysaccharide-Degrading, Thermophilic Anaerobe Spirochaeta thermophila DSM 6192

    Article • Journal of Bacteriology, October 2010, ASM Journals

    Professor Rolf Daniel, Dr. Angel Angelov

  234. Comparative Analysis of Plasmids in the Genus Listeria

    Article • PLoS ONE, September 2010, PLOS

    Professor Rolf Daniel

  235. Host Imprints on Bacterial Genomes—Rapid, Divergent Evolution in Individual Patients

    Article • PLoS Pathogens, August 2010, PLOS

    Professor Ulrich Dobrindt, Professor Rolf Daniel

  236. Structural peculiarities of linear megaplasmid, pLMA1, from Micrococcus luteus interfere with pyrosequencing reads assembly

    Article • Biotechnology Letters, July 2010, Springer Science + Business Media

    Professor Rolf Daniel

  237. Treephyler: fast taxonomic profiling of metagenomes

    Article • Bioinformatics, February 2010, Oxford University Press (OUP)

    Professor Rolf Daniel

  238. Metagenomics

    Article • January 2010

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  239. Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8

    Article • BMC Genomics, January 2010, Springer Science + Business Media

    Professor Rolf Daniel

  240. Phylogenetic Diversity and Metabolic Potential Revealed in a Glacier Ice Metagenome

    Article • Applied and Environmental Microbiology, October 2009, ASM Journals

    Professor Rolf Daniel

  241. Achievements and new knowledge unraveled by metagenomic approaches

    Article • Applied Microbiology and Biotechnology, September 2009, Springer Science + Business Media

    Professor Rolf Daniel

  242. The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea

    Article • The ISME Journal, September 2009, Nature

    Professor Rolf Daniel, Dr Nikos C Kyrpides

  243. Rapid Identification of Genes Encoding DNA Polymerases by Function-Based Screening of Metagenomic Libraries Derived from Glacial Ice

    Article • Applied and Environmental Microbiology, March 2009, ASM Journals

    Professor Rolf Daniel

  244. Isolation and Characterization of Metalloproteases with a Novel Domain Structure by Construction and Screening of Metagenomic Libraries

    Article • Applied and Environmental Microbiology, February 2009, ASM Journals

    Professor Rolf Daniel

  245. Advances in Recovery of Novel Biocatalysts from Metagenomes

    Article • Journal of Molecular Microbiology and Biotechnology, January 2009, Karger Publishers

    Professor Wolfgang R. Streit, Professor Rolf Daniel

  246. Gene prediction in metagenomic fragments: A large scale machine learning approach

    Article • BMC Bioinformatics, January 2008, Springer Science + Business Media

    Professor Rolf Daniel

  247. Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: cloning and expression of the gene encoding 1,3-propanediol dehydrogenase

    Article • FEMS Microbiology Letters, January 2006, Oxford University Press (OUP)

    Professor Rolf Daniel

  248. Purification and characterization of an extracellular lipase from Clostridium tetanomorphum

    Article • World Journal of Microbiology and Biotechnology, December 2005, Springer Science + Business Media

    Professor Rolf Daniel

  249. Enhancement of gene detection frequencies by combining DNA-based stable-isotope probing with the construction of metagenomic DNA libraries

    Article • World Journal of Microbiology and Biotechnology, September 2005, Springer Science + Business Media

    Professor Rolf Daniel

  250. Insights into the Genome of the Enteric Bacterium Escherichia blattae: Cobalamin (B12) Biosynthesis, B12-Dependent Reactions, and Inactivation of the Gene Region Encoding B12-Dependent Glycerol Dehydratase by a N...

    Article • Journal of Molecular Microbiology and Biotechnology, July 2005, Karger Publishers

    Professor Rolf Daniel

  251. The metagenomics of soil

    Article • Nature Reviews Microbiology, June 2005, Nature

    Professor Rolf Daniel

  252. Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms

    Article • Current Opinion in Biotechnology, August 2004, Elsevier

    Professor Rolf Daniel

  253. Enrichment of chitinolytic microorganisms: isolation and characterization of a chitinase exhibiting antifungal activity against phytopathogenic fungi from a novel Streptomyces strain

    Article • Applied Microbiology and Biotechnology, July 2004, Springer Science + Business Media

    Professor Rolf Daniel

  254. The soil metagenome – a rich resource for the discovery of novel natural products

    Article • Current Opinion in Biotechnology, June 2004, Elsevier

    Professor Rolf Daniel

  255. Article • BMC Evolutionary Biology, January 2004, Springer Science + Business Media

    Professor Rolf Daniel

  256. Metagenomes of Complex Microbial Consortia Derived from Different Soils as Sources for Novel Genes Conferring Formation of Carbonyls from Short-Chain Polyols on Escherichia coli

    Article • Journal of Molecular Microbiology and Biotechnology, March 2003, Karger Publishers

    Professor Rolf Daniel

  257. Construction and Screening of Metagenomic Libraries Derived from Enrichment Cultures: Generation of a Gene Bank for Genes Conferring Alcohol Oxidoreductase Activity on Escherichia coli

    Article • Applied and Environmental Microbiology, March 2003, ASM Journals

    Professor Rolf Daniel

  258. Screening of Environmental DNA Libraries for the Presence of Genes Conferring Na+(Li+)/H+Antiporter Activity on Escherichia coli: Characterization of the Recovered Genes and the Corresponding Gene Products

    Article • Journal of Bacteriology, November 2001, ASM Journals

    Professor Rolf Daniel

  259. Identification and expression of the genes and purification and characterization of the gene products involved in reactivation of coenzyme B12-dependent glycerol dehydratase ofCitrobacter freundii

    Article • European Journal of Biochemistry, April 2001, Wiley

    Professor Rolf Daniel

  260. Screening of Environmental DNA Libraries for the Presence of Genes Conferring Lipolytic Activity onEscherichia coli

    Article • Applied and Environmental Microbiology, July 2000, ASM Journals

    Professor Rolf Daniel

  261. Identification of the syntrophic partners in a coculture coupling anaerobic methanol oxidation to Fe(III) reduction

    Article • FEMS Microbiology Letters, November 1999, Oxford University Press (OUP)

    Professor Rolf Daniel

  262. Identification of the syntrophic partners in a coculture coupling anaerobic methanol oxidation to Fe(III) reduction

    Article • FEMS Microbiology Letters, November 1999, Oxford University Press (OUP)

    Professor Rolf Daniel

  263. Biochemistry of coenzyme B12-dependent glycerol and diol dehydratases and organization of the encoding genes

    Article • FEMS Microbiology Reviews, December 1998, Wiley

    Professor Rolf Daniel

  264. Properties and sequence of the coenzyme B12-dependent glycerol dehydratase ofClostridium pasteurianum

    Article • FEMS Microbiology Letters, July 1998, Oxford University Press (OUP)

    Professor Rolf Daniel

  265. Properties and sequence of the coenzyme B12-dependent glycerol dehydratase of Clostridium pasteurianum

    Article • FEMS Microbiology Letters, July 1998, Oxford University Press (OUP)

    Professor Rolf Daniel

  266. Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: cloning and expression of the gene encoding 1,3-propanediol dehydrogenase

    Article • FEMS Microbiology Letters, September 1997, Oxford University Press (OUP)

    Professor Rolf Daniel

  267. The Na+-translocating ATPase of Acetobacterium woodii is a F1F0-type enzyme as deduced from the primary structure of its β, γ and ϵ subunits

    Article • Biochimica et Biophysica Acta (BBA) - Bioenergetics, May 1995, Elsevier

    Professor Rolf Daniel

  268. Growth temperature-dependent activity of glycerol dehydratase in Escherichia coli expressing the Citrobacter freundii dha regulon

    Article • FEMS Microbiology Letters, December 1992, Oxford University Press (OUP)

    Professor Rolf Daniel

  269. Growth temperature-dependent activity of glycerol dehydratase in Escherichia coli expressing the Citrobacter freundii dha regulon

    Article • FEMS Microbiology Letters, December 1992, Oxford University Press (OUP)

    Professor Rolf Daniel

  270. Growth temperature-dependent activity of glycerol dehydratase inEscherichia coliexpressing theCitrobacter freundii dharegulon

    Article • FEMS Microbiology Letters, December 1992, Oxford University Press (OUP)

    Professor Rolf Daniel