All Stories

  1. Exploiting Docker containers over Grid computing for a comprehensive study of chromatin conformation in different cell types
  2. Why High-Performance Modelling and Simulation for Big Data Applications Matters
  3. Power-aware pipelining with automatic concurrency control
  4. PiCo: High-performance data analytics pipelines in modern C++
  5. Deep Learning for Automated Skeletal Bone Age Assessment in X-Ray Images
  6. A parallel pattern for iterative stencil + reduce
  7. PWHATSHAP: efficient haplotyping for future generation sequencing
  8. A Cluster-as-Accelerator Approach for SPMD-Free Data Parallelism
  9. RPL: A Domain-Specific Language for Designing and Implementing Parallel C++ Applications
  10. NuchaRt: Embedding High-Level Parallel Computing in R for Augmented Hi-C Data Analysis
  11. Message from the ScalCom 2015 Chairs
  12. The Loop-of-Stencil-Reduce Paradigm
  13. Pool Evolution: A Parallel Pattern for Evolutionary and Symbolic Computing
  14. Memory-Optimised Parallel Processing of Hi-C Data
  15. Parallel Exploration of the Nuclear Chromosome Conformation with NuChart-II
  16. Parallel visual data restoration on multi-GPGPUs using stencil-reduce pattern
  17. Integrating multi-omic features exploiting Chromosome Conformation Capture data
  18. High-Performance Haplotype Assembly
  19. NuChart-II: A Graph-Based Approach for Analysis and Interpretation of Hi-C Data
  20. Exercising High-Level Parallel Programming on Streams: A Systems Biology Use Case
  21. Preface from the Organizing Chairs
  22. Table of Contents
  23. On Designing Multicore-Aware Simulators for Systems Biology Endowed with OnLine Statistics
  24. Sequence Alignment Tools: One Parallel Pattern to Rule Them All?
  25. Design patterns percolating to parallel programming framework implementation
  26. Discovering biological knowledge by integrating high-throughput data and scientific literature on the cloud
  27. Decision tree building on multi‐core using FastFlow
  28. Parallel stochastic systems biology in the cloud
  29. Parallel Stochastic Simulators in System Biology: The Evolution of the Species
  30. Structured Data Access Annotations for Massively Parallel Computations
  31. Targeting Distributed Systems in FastFlow
  32. MuCoCoS 2012: 5th International Workshop on Multi-Core Computing Systems Focus: Performance Portability and Tuning
  33. A parallel edge preserving algorithm for salt and pepper image denoising
  34. TARGETING HETEROGENEOUS ARCHITECTURES VIA MACRO DATA FLOW
  35. Parallel Patterns + Macro Data Flow for Multi-core Programming
  36. An Efficient Unbounded Lock-Free Queue for Multi-core Systems
  37. On Designing Multicore-Aware Simulators for Biological Systems
  38. Accelerating Code on Multi-cores with FastFlow
  39. LIBERO: A Framework for Autonomic Management of Multiple Non-functional Concerns
  40. StochKit-FF: Efficient Systems Biology on Multicore Architectures
  41. Efficient Smith-Waterman on Multi-core with FastFlow
  42. Autonomic management of multiple non-functional concerns in behavioural skeletons
  43. Integrating Autonomic Grid Components and Process-Driven Business Applications
  44. Porting Decision Tree Algorithms to Multicore Using FastFlow
  45. Autonomic management of non-functional concerns in distributed & parallel application programming
  46. Co-design of Distributed Systems Using Skeleton and Autonomic Management Abstractions
  47. Stkm on Sca: A Unified Framework with Components, Workflows and Algorithmic Skeletons
  48. Semi-formal Models to Support Program Development: Autonomic Management within Component Based Parallel and Distributed Programming
  49. Towards Hierarchical Management of Autonomic Components: A Case Study
  50. Securing skeletal systems with limited performance penalty: The muskel experience
  51. AUTOMATIC MAPPING OF ASSIST APPLICATIONS USING PROCESS ALGEBRA
  52. Behavioural Skeletons in GCM: Autonomic Management of Grid Components
  53. The VirtuaLinux Storage Abstraction Layer for Ef?cient Virtual Clustering
  54. Advances in Autonomic Components & Services
  55. Behavioural Skeletons for Component Autonomic Management on Grids
  56. From Orc Models To Distributed Grid Java Code
  57. Towards software component assembly language enhanced with workflows and skeletons
  58. Towards A Formal Semantics For Autonomic Components
  59. Skeleton-based parallel programming: Functional and parallel semantics in a single shot
  60. The cost of security in skeletal systems
  61. Adding metadata to Orc to support reasoning about grid programs
  62. Management in Distributed Systems: A Semi-formal Approach
  63. Algorithmic skeletons meeting grids
  64. Autonomic QoS in ASSIST grid-aware components
  65. Optimization techniques for skeletons on grids
  66. Dynamic Reconfiguration of Grid-Aware Applications in ASSIST
  67. A framework for experimenting with structured parallel programming environment design
  68. An operational semantics for skeletons
  69. : EXPERIMENTING WITH SKELETONS IN THE SHARED ADDRESS MODEL
  70. An advanced environment supporting structured parallel programming in Java
  71. Adaptable Parallel Components for Grid Programming
  72. An Abstract Schema Modeling Adaptivity Management
  73. Skeleton Parallel Programming and Parallel Objects
  74. Towards the Automatic Mapping of Assist Applications for the Grid
  75. ASSIST As a Research Framework for High-Performance Grid Programming Environments
  76. Structured Implementation of Component-Based Grid Programming Environments
  77. Components for High-Performance Grid Programming in Grid.IT