All Stories

  1. Approximate inference of gene regulatory network models from RNA-Seq time series data

    Article • BMC Bioinformatics, April 2018, Springer Science + Business Media

    Dr Tom Thorne

  2. Empirical likelihood tests for nonparametric detection of differential expression from RNA-seq data

    Article • Statistical Applications in Genetics and Molecular Biology, January 2015, De Gruyter

    Dr Tom Thorne

  3. Bayesian non-parametric approaches to reconstructing oscillatory systems and the Nyquist limit

    Article • Physica A Statistical Mechanics and its Applications, August 2014, Elsevier

    Dr Paul Kirk, Dr Tom Thorne

  4. Derivative processes for modelling metabolic fluxes

    Article • Bioinformatics, February 2014, Oxford University Press (OUP)

    Dr Paul Kirk, Dr Tom Thorne

  5. Model selection in systems and synthetic biology

    Article • Current Opinion in Biotechnology, August 2013, Elsevier

    Dr Paul Kirk, Dr Tom Thorne

  6. Graphical modelling of molecular networks underlying sporadic inclusion body myositis

    Article • Molecular BioSystems, January 2013, Royal Society of Chemistry

    Dr Tom Thorne

  7. Inference of temporally varying Bayesian Networks

    Article • Bioinformatics, October 2012, Oxford University Press (OUP)

    Dr Tom Thorne

  8. Combinatorial stresses kill pathogenic Candida species

    Article • Medical Mycology, October 2012, Oxford University Press (OUP)

    Dr Tom Thorne, Mauricio Barahona

  9. Parameter-free model discrimination criterion based on steady-state coplanarity

    Article • Proceedings of the National Academy of Sciences, September 2012, Proceedings of the National Academy of Sciences

    Dr Tom Thorne

  10. Considerate approaches to constructing summary statistics for ABC model selection

    Article • Statistics and Computing, June 2012, Springer Science + Business Media

    Dr Tom Thorne

  11. Graph spectral analysis of protein interaction network evolution

    Article • Journal of The Royal Society Interface, May 2012, Royal Society Publishing

    Dr Tom Thorne

  12. Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation

    Article • Integrative Biology, January 2012, Oxford University Press (OUP)

    Dr Tom Thorne

  13. A systems biology analysis of long and short-term memories of osmotic stress adaptation in fungi

    Article • BMC Research Notes, January 2012, Springer Science + Business Media

    Dr Tom Thorne

  14. Prediction of putative protein interactions through evolutionary analysis of osmotic stress response in the model yeast Saccharomyces cerevisae

    Article • Fungal Genetics and Biology, May 2011, Elsevier

    Dr Tom Thorne

  15. The Evolution of the Phage Shock Protein Response System: Interplay between Protein Function, Genomic Organization, and System Function

    Article • Molecular Biology and Evolution, November 2010, Oxford University Press (OUP)

    Dr Tom Thorne

  16. Estimating the size of the human interactome

    Article • Proceedings of the National Academy of Sciences, May 2008, Proceedings of the National Academy of Sciences

    Dr Tom Thorne

  17. Evolution at the system level: the natural history of protein interaction networks

    Article • Trends in Ecology & Evolution, July 2007, Elsevier

    Dr Tom Thorne

  18. Generating confidence intervals on biological networks

    Article • BMC Bioinformatics, January 2007, Springer Science + Business Media

    Dr Tom Thorne

  19. Article • BMC Biology, January 2006, Springer Science + Business Media

    Dr Tom Thorne