All Stories

  1. Novel Protein-oligonucleotide Conjugation Method Involving a High-affinity Capture HaloTag

    Article • BIO-PROTOCOL, January 2020, Bio-Protocol, LLC

    Junshi Yazaki

  2. HaloTag-based conjugation of proteins to barcoding-oligonucleotides

    Article • Nucleic Acids Research, November 2019, Oxford University Press (OUP)

    Junshi Yazaki

  3. Profiling Interactome Networks with the HaloTag-NAPPA In Situ Protein Array

    Article • Current Protocols in Plant Biology, August 2018, Wiley

    Junshi Yazaki, Dr Joseph R Ecker

  4. A signaling pathway complementary to the core known ABA signaling conected to JA signaling

    Article • Scientific Reports, June 2016, Nature

    Junshi Yazaki, Fernando Aleman, Dr Joseph R Ecker

  5. TF-interactome by HaloTag protein arrays

    Article • Proceedings of the National Academy of Sciences, June 2016, Proceedings of the National Academy of Sciences

    Junshi Yazaki, Fernando Aleman, Dr Joseph R Ecker

  6. Comparison of long-term up-regulated genes during induction of freezing tolerance by cold and ABA in bromegrass cell cultures revealed by microarray analyses

    Article • Plant Growth Regulation, April 2013, Springer Science + Business Media

    Junshi Yazaki

  7. Evidence for Network Evolution in an Arabidopsis Interactome Map

    Article • Science, July 2011, American Association for the Advancement of Science

    Junshi Yazaki

  8. A Novel FactorFLOURY ENDOSPERM2Is Involved in Regulation of Rice Grain Size and Starch Quality

    Article • The Plant Cell, October 2010, American Society of Plant Biologists (ASPB)

    Junshi Yazaki

  9. Addendum: Literature-curated protein interaction datasets

    Article • Nature Methods, November 2009, Springer Science + Business Media

    Dr Joseph R Ecker, Junshi Yazaki

  10. Analysis of expressed sequence tags in apomictic guineagrass (Panicum maximum)

    Article • Journal of Plant Physiology, May 2009, Elsevier

    Junshi Yazaki

  11. Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis

    Article • Genes & Development, February 2009, Cold Spring Harbor Laboratory Press

    Junshi Yazaki, Dr Joseph R Ecker

  12. Literature-curated protein interaction datasets

    Article • Nature Methods, December 2008, Springer Science + Business Media

    Dr Joseph R Ecker, Junshi Yazaki

  13. Rice functional genomics via cDNA microarray analysis

    Article • April 2008, World Scientific Pub Co Pte Lt

    Junshi Yazaki

  14. Utilizing tiling microarrays for whole‐genome analysis in plants

    Article • The Plant Journal, February 2008, Wiley

    Dr Joseph R Ecker, Junshi Yazaki

  15. Genome-Wide High-Resolution Mapping of Exosome Substrates Reveals Hidden Features in the Arabidopsis Transcriptome

    Article • Cell, December 2007, Elsevier

    Dr Joseph R Ecker, Junshi Yazaki, Dr. Ueli Grossniklaus

  16. Mapping the genome landscape using tiling array technology

    Article • Current Opinion in Plant Biology, October 2007, Elsevier

    Dr Joseph R Ecker, Junshi Yazaki

  17. Sequential Regulation of Gibberellin, Brassinosteroid, and Jasmonic Acid Biosynthesis Occurs in Rice Coleoptiles to Control the Transcript Levels of Anti-MicrobialThioninGenes

    Article • Bioscience Biotechnology and Biochemistry, October 2006, Taylor & Francis

    Junshi Yazaki

  18. Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley

    Article • The Plant Journal, October 2006, Wiley

    Junshi Yazaki

  19. Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis

    Article • Cell, September 2006, Elsevier

    Dr Joseph R Ecker, Junshi Yazaki

  20. Structure and expression of two genes encoding secreted acid phosphatases under phosphate-deficient conditions in Pholiota nameko strain N2

    Article • Current Genetics, February 2006, Springer Science + Business Media

    Junshi Yazaki

  21. Transcriptomic analysis indicates putative metabolic changes caused by manipulation of phosphorus availability in rice leaves

    Article • Journal of Experimental Botany, January 2006, Oxford University Press (OUP)

    Junshi Yazaki, Dr Takuro Shinano

  22. A Microarray Analysis of Rice Near-Isogenic Lines that Cover QTLs Associated with Callus Proliferation

    Article • Japan Agricultural Research Quarterly JARQ, January 2006, Japan International Research Center for Agricultural Sciences

    Junshi Yazaki

  23. The Genomic View of Genes Responsive to the Antagonistic Phytohormones, Abscisic Acid, and Gibberellin

    Article • January 2005, Elsevier

    Junshi Yazaki

  24. Microarray Analysis of Sink-Source Transition in Rice Leaf Sheaths

    Article • Breeding Science, January 2005, Japanese Society of Breeding

    Junshi Yazaki

  25. The virescent-2 Mutation Inhibits Translation of Plastid Transcripts for the Plastid Genetic System at an Early Stage of Chloroplast Differentiation

    Article • Plant and Cell Physiology, August 2004, Oxford University Press (OUP)

    Junshi Yazaki

  26. Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice andArabidopsis

    Article • Physiological Genomics, February 2004, American Physiological Society

    Junshi Yazaki, Piero Carninci

  27. Identification of several rice genes regulated by Si nutrition

    Article • Soil Science & Plant Nutrition, February 2004, Taylor & Francis

    Junshi Yazaki

  28. Upregulation of the genes for ferritin, RNase, and DnaJ in leaves of rice plants in response to sulfur deficiency

    Article • Soil Science & Plant Nutrition, February 2004, Taylor & Francis

    Junshi Yazaki

  29. cDNA Microarray Analysis of Rice Anther Genes under Chilling Stress at the Microsporogenesis Stage Revealed Two Genes with DNA TransposonCastawayin the 5′-Flanking Region

    Article • Bioscience Biotechnology and Biochemistry, January 2004, Taylor & Francis

    Junshi Yazaki

  30. The Rice PIPELINE: a unification tool for plant functional genomics

    Article • Nucleic Acids Research, January 2004, Oxford University Press (OUP)

    Junshi Yazaki

  31. Transcriptomic analysis of metabolic changes by phosphorus stress in rice plant roots

    Article • Plant Cell & Environment, September 2003, Wiley

    Junshi Yazaki

  32. Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice

    Article • Science, July 2003, American Association for the Advancement of Science

    Junshi Yazaki, Piero Carninci

  33. cDNA microarray analysis of gene expression in rice plants treated with probenazole, a chemical inducer of disease resistance

    Article • Journal of General Plant Pathology, February 2003, Springer Science + Business Media

    Junshi Yazaki

  34. Novel Gene Encoding a Ca2+-Binding Protein and under Hexokinase-dependent Sugar Regulation

    Article • Bioscience Biotechnology and Biochemistry, January 2003, Taylor & Francis

    Junshi Yazaki

  35. Genomics Approach to Abscisic Acid- and Gibberellin-responsive Genes in Rice

    Article • DNA Research, January 2003, Oxford University Press (OUP)

    Junshi Yazaki, Piero Carninci

  36. Rice Expression Database: the gateway to rice functional genomics

    Article • Trends in Plant Science, December 2002, Elsevier

    Junshi Yazaki

  37. Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells

    Article • Proceedings of the National Academy of Sciences, November 2002, Proceedings of the National Academy of Sciences

    Junshi Yazaki

  38. cDNA microarray analysis of gene expression during Fe-deficiency stress in barley suggests that polar transport of vesicles is implicated in phytosiderophore secretion in Fe-deficient barley roots

    Article • The Plant Journal, April 2002, Wiley

    Junshi Yazaki

  39. A Comprehensive Rice Transcript Map Containing 6591 Expressed Sequence Tag Sites

    Article • The Plant Cell, March 2002, American Society of Plant Biologists (ASPB)

    Junshi Yazaki

  40. Large-Scale Identification of Elicitor-Responsive Genes in Suspension -Cultured Rice Cells by DNA Microarray.

    Article • Plant Biotechnology, January 2002, Japanese Society for Plant Cell and Molecular Biology

    Junshi Yazaki

  41. Embarking on Rice Functional Genomics Via cDNA Microarray: Use of 3' UTR Probes for Specific Gene Expression Analysis

    Article • DNA Research, January 2000, Oxford University Press (OUP)

    Junshi Yazaki

  42. Electrophoretic analysis of soluble proteins specifically synthesized under phosphate deficiency in the mycelia of Pholiota nameko

    Article • Mycoscience, July 1998, Elsevier

    Junshi Yazaki

  43. Isolation and Properties of Glucose-1-phosphatase from Mycelia ofPholiota nameko

    Article • Bioscience Biotechnology and Biochemistry, January 1998, Taylor & Francis

    Junshi Yazaki

  44. Acid phosphatase isozymes secreted under phosphatedeficient conditions in Pholiota nameko

    Article • Mycoscience, October 1997, Elsevier

    Junshi Yazaki

  45. Purification and characterization of secreted acid phosphatase under phosphate-deficient condition in Pholiota nameko

    Article • Mycoscience, April 1996, Elsevier

    Junshi Yazaki