All Stories

  1. Easy and efficient ensemble gene set testing with EGSEA

    Article • F1000Research, November 2017, Faculty of 1000, Ltd.

    Dr Matthew E Ritchie, Dr Monther Alhamdoosh

  2. Four simple recommendations to encourage best practices in research software

    Article • F1000Research, June 2017, Faculty of 1000, Ltd.

    Dr Monther Alhamdoosh, Mr Rafael C Jimenez, Mr Neil P Chue Hong, Professor Josep Ll. Gelpi, Prof Carole A Goble, Rob Hooft, Daniel S Katz, Mr Federico López Gómez, Dr Sonika Tyagi, Sonika Tyagi, Mateusz Kuzak, Allegra Via, Xiaochuan (Harry) Wang, Montserrat Gonzalez, Björn Grüning, Andrew Treloar, Nathan Watson-Haigh, Dr. Yasset Perez-Riverol

  3. RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR

    Article • F1000Research, June 2016, Faculty of 1000, Ltd.

    Dr Monther Alhamdoosh, Dr Matthew E Ritchie

  4. ANFIS-based Fuzzy Systems for Searching DNA-Protein Binding Sites

    Article • June 2016, Cold Spring Harbor Laboratory Press

    Dr Monther Alhamdoosh

  5. Enhanced pedotransfer functions with support vector machines to predict water retention of calcareous soil

    Article • European Journal of Soil Science, May 2016, Wiley

    Dr Monther Alhamdoosh, Dr Ahmed DOUAIK

  6. Combining multiple tools outperforms individual methods in gene set enrichment analyses

    Article • March 2016, Cold Spring Harbor Laboratory Press

    Dr Monther Alhamdoosh

  7. Fast decorrelated neural network ensembles with random weights

    Article • Information Sciences, April 2014, Elsevier

    Dr Monther Alhamdoosh

  8. Evolutionary extreme learning machine ensembles with size control

    Article • Neurocomputing, February 2013, Elsevier

    Dr Monther Alhamdoosh

  9. Improving the prediction of disulfide bonds in Eukaryotes with machine learning methods and protein subcellular localization

    Article • Bioinformatics, June 2011, Oxford University Press (OUP)

    Dr Monther Alhamdoosh