All Stories

  1. TIE1 acts as a maternal brake on fertilization-independent endosperm development by associating with PRC2 to enforce imprinting

    Article • Nature Plants, July 2026, Springer Science + Business Media

    Xuemei Chen

  2. Key RNA elements influencing DCL1 cleavage in plant microRNA biogenesis

    Article • Nature Plants, August 2025, Springer Science + Business Media

    Xuemei Chen

  3. Plant microRNA maturation and function

    Article • Nature Reviews Molecular Cell Biology, July 2025, Springer Science + Business Media

    Xuemei Chen

  4. A PHR transcription factor-directed gene network reveals key regulators of phosphate metabolism and starvation responses in tomato

    Article • The Plant Cell, July 2025, Oxford University Press (OUP)

    Xuemei Chen

  5. A multisensor high-temperature signaling framework for triggering daytime thermomorphogenesis in Arabidopsis

    Article • Nature Communications, June 2025, Springer Science + Business Media

    Xuemei Chen

  6. The rice microRNA159–SPOROCYTELESS EAR2 module regulates starch biosynthesis during pollen development and maintains male fertility

    Article • The Plant Cell, December 2024, Oxford University Press (OUP)

    Xuemei Chen

  7. HOT3/eIF5B1 confers Kozak motif-dependent translational control of photosynthesis-associated nuclear genes for chloroplast biogenesis

    Article • Nature Communications, November 2024, Springer Science + Business Media

    Xuemei Chen

  8. ALTERED MERISTEM PROGRAM1 impairs RNA silencing by repressing the biogenesis of a subset of inverted repeat-derived siRNAs

    Article • The Plant Cell, November 2024, Oxford University Press (OUP)

    Xuemei Chen

  9. Arabidopsis transcription factor TCP4 controls the identity of the apical gynoecium

    Article • The Plant Cell, April 2024, Oxford University Press (OUP)

    Xuemei Chen

  10. Toll/interleukin-1 receptor (TIR) domain-containing proteins have NAD-RNA decapping activity

    Article • Nature Communications, March 2024, Springer Science + Business Media

    Xuemei Chen

  11. MicroRNA1432 regulates rice drought stress tolerance by targeting the CALMODULIN-LIKE2 gene

    Article • PLANT PHYSIOLOGY, March 2024, Oxford University Press (OUP)

    Xuemei Chen

  12. Plastid Transcription: A Major Regulatory Point in Chloroplast Biogenesis

    Article • January 2024, Springer Science + Business Media

    Xuemei Chen

  13. microRNA biogenesis and stabilization in plants

    Article • Fundamental Research, September 2023, Elsevier

    Xuemei Chen

  14. 25 Years of thermomorphogenesis research: milestones and perspectives

    Article • Trends in Plant Science, August 2023, Elsevier

    Professor Jorge J Casal, Ive De De Smet, Xuemei Chen

  15. HEN1 SUPPRESSOR1 stabilizes polymerase IV RNAs via uridylation in Arabidopsis

    Article • PLANT PHYSIOLOGY, May 2023, Oxford University Press (OUP)

    Xuemei Chen

  16. Plant phase extraction: A method for enhanced discovery of the RNA-binding proteome and its dynamics in plants

    Article • The Plant Cell, May 2023, Oxford University Press (OUP)

    Xuemei Chen

  17. The DEAD-box helicase RCF1 plays roles in miRNA biogenesis and RNA splicing inArabidopsis

    Article • April 2023, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  18. Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation

    Article • Proceedings of the National Academy of Sciences, April 2023, Proceedings of the National Academy of Sciences

    Xuemei Chen

  19. MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis

    Article • Nature Communications, March 2023, Springer Science + Business Media

    Xuemei Chen

  20. Focus on RNA biology

    Article • The Plant Cell, March 2023, Oxford University Press (OUP)

    Xuemei Chen

  21. The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities

    Article • PLoS Genetics, March 2023, PLOS

    Xuemei Chen

  22. An advanced protocol for profiling RNA-binding proteins in Arabidopsis using plant phase extraction

    Article • Biology Methods and Protocols, January 2023, Oxford University Press (OUP)

    Xuemei Chen

  23. Anterograde signaling controls plastid transcription via sigma factors separately from nuclear photosynthesis genes

    Article • Nature Communications, December 2022, Springer Science + Business Media

    Xuemei Chen

  24. Arabidopsis AAR2, a conserved splicing factor in eukaryotes, acts in microRNA biogenesis

    Article • Proceedings of the National Academy of Sciences, October 2022, Proceedings of the National Academy of Sciences

    Xuemei Chen

  25. The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities

    Article • September 2022, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  26. A spontaneous thermo-sensitive female sterility mutation in rice enables fully mechanized hybrid breeding

    Article • BDJ, September 2022, Springer Science + Business Media

    Xuemei Chen

  27. Arabidopsis AAR2, a conserved splicing factor in eukaryotes, acts in microRNA biogenesis

    Article • June 2022, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  28. Parallel analysis of RNA ends reveals global microRNA-mediated target RNA cleavage in maize

    Article • June 2022, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  29. Plant phase extraction (PPE): A novel method for enhanced discovery of RNA-binding proteome in plants

    Article • June 2022, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  30. Plant and animal small RNA communications between cells and organisms

    Article • Nature Reviews Molecular Cell Biology, October 2021, Springer Science + Business Media

    Xuemei Chen

  31. Quality control and evaluation of plant epigenomics data

    Article • The Plant Cell, October 2021, Oxford University Press (OUP)

    Xuemei Chen

  32. TRANS-ACTING SIRNA3-derived short interfering RNAs confer cleavage of mRNAs in rice

    Article • PLANT PHYSIOLOGY, September 2021, Oxford University Press (OUP)

    Xuemei Chen

  33. RBV, an evolutionarily conserved WD40 repeat protein, promotes microRNA biogenesis and loading into ARGONAUTE1 in Arabidopsis

    Article • June 2021, Springer Science + Business Media

    Xuemei Chen

  34. High resolution RNA‐seq profiling of genes encoding ribosomal proteins across different organs and developmental stages in Arabidopsis thaliana

    Article • Plant Direct, May 2021, Wiley

    Xuemei Chen

  35. Use of NAD tagSeq II to identify growth phase-dependent alterations in E. coli RNA NAD + capping

    Article • Proceedings of the National Academy of Sciences, March 2021, Proceedings of the National Academy of Sciences

    Xuemei Chen

  36. SPAAC-NAD-seq, a sensitive and accurate method to profile NAD + -capped transcripts

    Article • Proceedings of the National Academy of Sciences, March 2021, Proceedings of the National Academy of Sciences

    Xuemei Chen

  37. Secrets of the MIR172 family in plant development and flowering unveiled

    Article • PLoS Biology, February 2021, PLOS

    Xuemei Chen

  38. Widespread occurrence of microRNA-mediated target cleavage on membrane-bound polysomes

    Article • January 2021, Springer Science + Business Media

    Xuemei Chen

  39. Regulation of Female Germline Specification via Small RNA Mobility in Arabidopsis

    Article • The Plant Cell, July 2020, Oxford University Press (OUP)

    Xuemei Chen

  40. Linking key steps of microRNA biogenesis by TREX-2 and the nuclear pore complex in Arabidopsis

    Article • Nature Plants, July 2020, Springer Science + Business Media

    Xuemei Chen

  41. FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis

    Article • Nature Communications, September 2019, Springer Science + Business Media

    Xuemei Chen

  42. HSP90 inhibitors stimulate DNAJB4 protein expression through a mechanism involving N6-methyladenosine

    Article • Nature Communications, August 2019, Springer Science + Business Media

    Xuemei Chen

  43. Genome-Wide Transcript and Small RNA Profiling Reveals Transcriptomic Responses to Heat Stress

    Article • PLANT PHYSIOLOGY, August 2019, Oxford University Press (OUP)

    Xuemei Chen

  44. NAD tagSeq reveals that NAD + -capped RNAs are mostly produced from a large number of protein-coding genes in Arabidopsis

    Article • Proceedings of the National Academy of Sciences, May 2019, Proceedings of the National Academy of Sciences

    Xuemei Chen

  45. NAD + -capped RNAs are widespread in the Arabidopsis transcriptome and can probably be translated

    Article • Proceedings of the National Academy of Sciences, May 2019, Proceedings of the National Academy of Sciences

    Xuemei Chen

  46. Author Correction: The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs

    Article • Nature Communications, February 2019, Springer Science + Business Media

    Xuemei Chen

  47. The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs

    Article • Nature Communications, November 2018, Springer Science + Business Media

    Xuemei Chen

  48. Intercellular and systemic trafficking of RNAs in plants

    Article • Nature Plants, November 2018, Springer Science + Business Media

    Xuemei Chen

  49. Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation

    Article • Proceedings of the National Academy of Sciences, July 2018, Proceedings of the National Academy of Sciences

    Xuemei Chen

  50. Biogenesis of a young, 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation

    Article • April 2018, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  51. The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing

    Article • The Plant Cell, September 2017, Oxford University Press (OUP)

    Xuemei Chen

  52. Conservation and divergence of small RNA pathways and microRNAs in land plants

    Article • August 2017, Springer Science + Business Media

    Xuemei Chen

  53. The THO Complex Non-Cell-Autonomously Represses Female Germline Specification through the TAS3-ARF3 Module

    Article • Current Biology, June 2017, Elsevier

    Xuemei Chen

  54. The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status

    Article • eLife, April 2017, eLife

    Xuemei Chen

  55. ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis

    Article • PLoS Biology, February 2017, PLOS

    Xuemei Chen

  56. The evolution of microRNAs in plants

    Article • Current Opinion in Plant Biology, February 2017, Elsevier

    Xuemei Chen

  57. RNA-seq analysis on Arabidopsis ago1-27 mutant

    Article • JOURNAL OF SHENZHEN UNIVERSITY SCIENCE AND ENGINEERING, January 2017, China Science Publishing & Media Ltd.

    Xuemei Chen

  58. Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis

    Article • eLife, December 2016, eLife

    Xuemei Chen

  59. POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites in Arabidopsis

    Article • Proceedings of the National Academy of Sciences, December 2016, Proceedings of the National Academy of Sciences

    Xuemei Chen

  60. PARylation of the forkhead‐associated domain protein DAWDLE regulates plant immunity

    Article • EMBO Reports, October 2016, EMBO

    Xuemei Chen

  61. APETALA2 antagonizes the transcriptional activity of AGAMOUS in regulating floral stem cells in Arabidopsis thaliana

    Article • New Phytologist, September 2016, Wiley

    Xuemei Chen

  62. FAR-RED ELONGATED HYPOCOTYL3 activates SEPALLATA2 but inhibits CLAVATA3 to regulate meristem determinacy and maintenance in Arabidopsis

    Article • Proceedings of the National Academy of Sciences, July 2016, Proceedings of the National Academy of Sciences

    Xuemei Chen

  63. RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants

    Article • Molecular Plant, June 2016, Elsevier

    Xuemei Chen

  64. Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis

    Article • Nature Genetics, April 2016, Springer Science + Business Media

    Xuemei Chen

  65. A partial loss-of-function mutation in an Arabidopsis RNA polymerase III subunit leads to pleiotropic defects

    Article • Journal of Experimental Botany, February 2016, Oxford University Press (OUP)

    Xuemei Chen

  66. Uridylation and adenylation of RNAs

    Article • Science in China Series C Life Sciences, October 2015, Springer Science + Business Media

    Xuemei Chen

  67. Mechanisms of microRNA turnover

    Article • Current Opinion in Plant Biology, October 2015, Elsevier

    Xuemei Chen

  68. SUVH1, a Su(var)3–9 family member, promotes the expression of genes targeted by DNA methylation

    Article • Nucleic Acids Research, September 2015, Oxford University Press (OUP)

    Xuemei Chen

  69. Fast-Suppressor Screening for New Components in Protein Trafficking, Organelle Biogenesis and Silencing Pathway in Arabidopsis thaliana Using DEX-Inducible FREE1-RNAi Plants

    Article • Journal of Genetics and Genomics, June 2015, Elsevier

    Xuemei Chen

  70. Distinct and Cooperative Activities of HESO1 and URT1 Nucleotidyl Transferases in MicroRNA Turnover in Arabidopsis

    Article • PLoS Genetics, April 2015, PLOS

    Xuemei Chen

  71. Synergistic and Independent Actions of Multiple Terminal Nucleotidyl Transferases in the 3’ Tailing of Small RNAs in Arabidopsis

    Article • PLoS Genetics, April 2015, PLOS

    Xuemei Chen

  72. Ancient Origin and Recent Innovations of RNA Polymerase IV and V

    Article • Molecular Biology and Evolution, March 2015, Oxford University Press (OUP)

    Xuemei Chen

  73. The Arabidopsis SWI2/SNF2 Chromatin Remodeler BRAHMA Regulates Polycomb Function during Vegetative Development and Directly Activates the Flowering Repressor Gene SVP

    Article • PLoS Genetics, January 2015, PLOS

    Xuemei Chen

  74. Chemical Genetic Screens Using Arabidopsis thaliana Seedlings Grown on Solid Medium

    Article • December 2014, Springer Science + Business Media

    Xuemei Chen

  75. The Exosome and Trans-Acting Small Interfering RNAs Regulate Cuticular Wax Biosynthesis during Arabidopsis Inflorescence Stem Development

    Article • PLANT PHYSIOLOGY, December 2014, Oxford University Press (OUP)

    Xuemei Chen

  76. Detection of Pol IV/RDR2-dependent transcripts at the genomic scale inArabidopsisreveals features and regulation of siRNA biogenesis

    Article • Genome Research, November 2014, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  77. AUXIN RESPONSE FACTOR 3integrates the functions ofAGAMOUSandAPETALA2in floral meristem determinacy

    Article • The Plant Journal, October 2014, Wiley

    Xuemei Chen

  78. Small RNAs meet their targets: When methylation defends miRNAs from uridylation

    Article • RNA Biology, September 2014, Taylor & Francis

    Xuemei Chen

  79. Roles of small RNAs in soybean defense againstPhytophthora sojaeinfection

    Article • The Plant Journal, July 2014, Wiley

    Xuemei Chen

  80. DNA Topoisomerase 1α Promotes Transcriptional Silencing of Transposable Elements through DNA Methylation and Histone Lysine 9 Dimethylation in Arabidopsis

    Article • PLoS Genetics, July 2014, PLOS

    Dr Joseph R Ecker, Xuemei Chen

  81. DNA Topoisomerase I Affects Polycomb Group Protein-Mediated Epigenetic Regulation and Plant Development by Altering Nucleosome Distribution in Arabidopsis

    Article • The Plant Cell, July 2014, Oxford University Press (OUP)

    Xuemei Chen

  82. Non-coding RNAs and DNA methylation in plants

    Article • National Science Review, May 2014, Oxford University Press (OUP)

    Xuemei Chen

  83. Methylation protects microRNAs from an AGO1-associated activity that uridylates 5′ RNA fragments generated by AGO1 cleavage

    Article • Proceedings of the National Academy of Sciences, April 2014, Proceedings of the National Academy of Sciences

    Xuemei Chen

  84. Traffic into silence: endomembranes and post-transcriptional RNA silencing

    Article • The EMBO Journal, March 2014, Wiley

    Xuemei Chen

  85. Special Issue on Plant Epigenetics

    Article • Molecular Plant, March 2014, Elsevier

    Xuemei Chen

  86. Small RNAs in Plants

    Article • January 2014, Springer Science + Business Media

    Xuemei Chen

  87. Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

    Article • The Plant Cell, July 2013, Oxford University Press (OUP)

    Xuemei Chen

  88. Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species

    Article • The Plant Cell, July 2013, Oxford University Press (OUP)

    Xuemei Chen

  89. MicroRNAs Inhibit the Translation of Target mRNAs on the Endoplasmic Reticulum in Arabidopsis

    Article • Cell, April 2013, Elsevier

    Xuemei Chen

  90. Oomycete pathogens encode RNA silencing suppressors

    Article • Nature Genetics, February 2013, Springer Science + Business Media

    Xuemei Chen

  91. NOT2 Proteins Promote Polymerase II–Dependent Transcription and Interact with Multiple MicroRNA Biogenesis Factors in Arabidopsis

    Article • The Plant Cell, February 2013, Oxford University Press (OUP)

    Xuemei Chen

  92. POWERDRESS and Diversified Expression of the MIR172 Gene Family Bolster the Floral Stem Cell Network

    Article • PLoS Genetics, January 2013, PLOS

    Xuemei Chen

  93. Generation of a luciferase-based reporter for CHH and CG DNA methylation in Arabidopsis thaliana

    Article • Silence, January 2013, Springer Science + Business Media

    Xuemei Chen

  94. Nucleus and Genome: Small RNAs

    Article • January 2013, Springer Science + Business Media

    Xuemei Chen

  95. MicroRNA–Mediated Repression of the Seed Maturation Program during Vegetative Development in Arabidopsis

    Article • PLoS Genetics, November 2012, PLOS

    Xuemei Chen

  96. Mechanisms that impact microRNA stability in plants

    Article • RNA Biology, October 2012, Taylor & Francis

    Xuemei Chen

  97. Small RNAs in development – insights from plants

    Article • Current Opinion in Genetics & Development, August 2012, Elsevier

    Xuemei Chen

  98. RNA polymerase V-dependent small RNAs in Arabidopsis originate from small, intergenic loci including most SINE repeats

    Article • Epigenetics, July 2012, Taylor & Francis

    Xuemei Chen

  99. A Histone Acetyltransferase Regulates Active DNA Demethylation in Arabidopsis

    Article • Science, June 2012, American Association for the Advancement of Science

    Xuemei Chen

  100. The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element

    Article • Development, April 2012, The Company of Biologists

    Xuemei Chen

  101. Uridylation of miRNAs by HEN1 SUPPRESSOR1 in Arabidopsis

    Article • Current Biology, April 2012, Elsevier

    Xuemei Chen

  102. The Arabidopsis Nucleotidyl Transferase HESO1 Uridylates Unmethylated Small RNAs to Trigger Their Degradation

    Article • Current Biology, April 2012, Elsevier

    Xuemei Chen

  103. Regulation of small RNA stability: methylation and beyond

    Article • BDJ, March 2012, Springer Science + Business Media

    Xuemei Chen

  104. Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing

    Article • Planta, March 2012, Springer Science + Business Media

    Xuemei Chen

  105. Plant development—a snapshot in 2012

    Article • Current Opinion in Plant Biology, February 2012, Elsevier

    Xuemei Chen

  106. Effective Small RNA Destruction by the Expression of a Short Tandem Target Mimic in Arabidopsis

    Article • The Plant Cell, February 2012, Oxford University Press (OUP)

    Xuemei Chen

  107. Development of a luciferase-based reporter of transcriptional gene silencing that enables bidirectional mutant screening in Arabidopsis thaliana

    Article • Silence, January 2012, Springer Science + Business Media

    Xuemei Chen

  108. microRNA Biogenesis and Turnover in Plants

    Article • Cold Spring Harbor Symposia on Quantitative Biology, January 2012, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  109. AGAMOUS Terminates Floral Stem Cell Maintenance in Arabidopsis by Directly Repressing WUSCHEL through Recruitment of Polycomb Group Proteins

    Article • The Plant Cell, October 2011, Oxford University Press (OUP)

    Xuemei Chen

  110. LEUNIG and SEUSS co-repressors regulate miR172 expression in Arabidopsis flowers

    Article • Development, May 2011, The Company of Biologists

    Xuemei Chen

  111. The plant Mediator and its role in noncoding RNA production

    Article • Frontiers in Biology, April 2011, Springer Science + Business Media

    Xuemei Chen

  112. Dynamics of histone H3 lysine 27 trimethylation in plant development

    Article • Current Opinion in Plant Biology, April 2011, Elsevier

    Xuemei Chen

  113. ARGONAUTE10 and ARGONAUTE1 Regulate the Termination of Floral Stem Cells through Two MicroRNAs in Arabidopsis

    Article • PLoS Genetics, March 2011, PLOS

    Xuemei Chen

  114. The Anaphase-Promoting Complex Is a Dual Integrator That Regulates Both MicroRNA-Mediated Transcriptional Regulation of Cyclin B1 and Degradation of Cyclin B1 during Arabidopsis Male Gametophyte Development

    Article • The Plant Cell, March 2011, Oxford University Press (OUP)

    Xuemei Chen

  115. The role of Mediator in small and long noncoding RNA production inArabidopsis thaliana

    Article • The EMBO Journal, January 2011, Wiley

    Xuemei Chen

  116. Transcriptional silencing induced by Arabidopsis T-DNA mutants is associated with 35S promoter siRNAs and requires genes involved in siRNA-mediated chromatin silencing

    Article • The Plant Journal, October 2010, Wiley

    Xuemei Chen

  117. Plant microRNAs at a glance

    Article • Seminars in Cell and Developmental Biology, October 2010, Elsevier

    Xuemei Chen

  118. Orchestration of the Floral Transition and Floral Development in Arabidopsis by the Bifunctional Transcription Factor APETALA2

    Article • The Plant Cell, July 2010, Oxford University Press (OUP)

    Xuemei Chen

  119. siRNAs compete with miRNAs for methylation by HEN1 in Arabidopsis

    Article • Nucleic Acids Research, May 2010, Oxford University Press (OUP)

    Xuemei Chen, Dr Shou-Wei Ding

  120. Small RNAs - secrets and surprises of the genome

    Article • The Plant Journal, March 2010, Wiley

    Xuemei Chen

  121. RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana

    Article • Proceedings of the National Academy of Sciences, December 2009, Proceedings of the National Academy of Sciences

    Xuemei Chen, Dr Shou-Wei Ding

  122. Intergenic transcription by RNA Polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis

    Article • Genes & Development, November 2009, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  123. Small RNAs and Their Roles in Plant Development

    Article • Annual Review of Cell and Developmental Biology, November 2009, Annual Reviews

    Xuemei Chen

  124. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids

    Article • Proceedings of the National Academy of Sciences, October 2009, Proceedings of the National Academy of Sciences

    Xuemei Chen

  125. Structural insights into mechanisms of the small RNA methyltransferase HEN1

    Article • Nature, October 2009, Springer Science + Business Media

    Xuemei Chen

  126. Endogenous Small RNA Pathways in Arabidopsis

    Article • April 2009, Taylor & Francis

    Xuemei Chen

  127. Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)

    Article • Genome Biology, January 2009, Springer Science + Business Media

    Dr. David M. Stelly, Xuemei Chen

  128. Computational prediction of novel non-coding RNAs in Arabidopsis thaliana

    Article • BMC Bioinformatics, January 2009, Springer Science + Business Media

    Xuemei Chen

  129. Criteria for Annotation of Plant MicroRNAs

    Article • The Plant Cell, December 2008, Oxford University Press (OUP)

    Xuemei Chen

  130. Degradation of microRNAs by a Family of Exoribonucleases in Arabidopsis

    Article • Science, September 2008, American Association for the Advancement of Science

    Xuemei Chen

  131. The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis

    Article • Proceedings of the National Academy of Sciences, July 2008, Proceedings of the National Academy of Sciences

    Xuemei Chen

  132. Small RNA metabolism in Arabidopsis

    Article • Trends in Plant Science, July 2008, Elsevier

    Xuemei Chen

  133. A Silencing Safeguard: Links between RNA Silencing and mRNA Processing in Arabidopsis

    Article • Developmental Cell, June 2008, Elsevier

    Xuemei Chen

  134. Small RNA-Directed Epigenetic Natural Variation in Arabidopsis thaliana

    Article • PLoS Genetics, April 2008, PLOS

    Xuemei Chen

  135. DICER-LIKE2 Plays a Primary Role in Transitive Silencing of Transgenes in Arabidopsis

    Article • PLOS One, March 2008, PLOS

    Xuemei Chen

  136. Biochemical Activities of Arabidopsis RNA-dependent RNA Polymerase 6

    Article • Journal of Biological Chemistry, February 2008, Elsevier

    Xuemei Chen

  137. MicroRNA Metabolism in Plants

    Article • January 2008, Springer Science + Business Media

    Xuemei Chen

  138. miR172 regulates stem cell fate and defines the inner boundary of APETALA3 and PISTILLATA expression domain in Arabidopsis floral meristems

    Article • The Plant Journal, June 2007, Wiley

    Xuemei Chen

  139. A marked end

    Article • Nature Structural & Molecular Biology, April 2007, Springer Science + Business Media

    Xuemei Chen

  140. The regulation of genes and genomes by small RNAs

    Article • Development, March 2007, The Company of Biologists

    Xuemei Chen

  141. Approaches for Studying MicroRNA and Small Interfering RNA Methylation In Vitro and In Vivo

    Article • January 2007, Elsevier

    Professor Saulius Klimašauskas, Xuemei Chen

  142. Floral patterning defects induced by Arabidopsis APETALA2 and microRNA172 expression in Nicotiana benthamiana

    Article • Plant Molecular Biology, July 2006, Springer Science + Business Media

    Xuemei Chen

  143. Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation inArabidopsis

    Article • FEBS Letters, May 2006, Wiley

    Xuemei Chen

  144. HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2' OH of the 3' terminal nucleotide

    Article • Nucleic Acids Research, January 2006, Oxford University Press (OUP)

    Xuemei Chen

  145. microRNA biogenesis and function in plants

    Article • FEBS Letters, August 2005, Wiley

    Xuemei Chen

  146. Methylation Protects miRNAs and siRNAs from a 3′-End Uridylation Activity in Arabidopsis

    Article • Current Biology, August 2005, Elsevier

    Xuemei Chen

  147. Methylation as a Crucial Step in Plant microRNA Biogenesis

    Article • Science, February 2005, American Association for the Advancement of Science

    Xuemei Chen

  148. siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis

    Article • Genes & Development, December 2004, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  149. HUA ENHANCER3 reveals a role for a cyclin-dependent protein kinase in the specification of floral organ identity in Arabidopsis

    Article • Development, July 2004, The Company of Biologists

    Xuemei Chen

  150. A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development

    Article • Science, March 2004, American Association for the Advancement of Science

    Xuemei Chen

  151. Posttranscriptional control of plant development

    Article • Current Opinion in Plant Biology, February 2004, Elsevier

    Xuemei Chen

  152. PAUSED, a Putative Exportin-t, Acts Pleiotropically in Arabidopsis Development But Is Dispensable for Viability

    Article • PLANT PHYSIOLOGY, August 2003, Oxford University Press (OUP)

    Xuemei Chen

  153. Arabidopsis HEN1

    Article • Current Biology, May 2003, Elsevier

    Dr Franck Vazquez, Xuemei Chen

  154. A uniform system for microRNA annotation

    Article • RNA, March 2003, Cold Spring Harbor Laboratory Press

    Xuemei Chen

  155. Two RNA Binding Proteins, HEN4 and HUA1, Act in the Processing of AGAMOUS Pre-mRNA in Arabidopsis thaliana

    Article • Developmental Cell, January 2003, Elsevier

    Xuemei Chen

  156. CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana

    Article • Current Biology, September 2002, Elsevier

    Xuemei Chen

  157. HUA1, a Regulator of Stamen and Carpel Identities in Arabidopsis, Codes for a Nuclear RNA Binding Protein

    Article • The Plant Cell, October 2001, Oxford University Press (OUP)

    Xuemei Chen

  158. Minimal regions in the Arabidopsis PISTILLATA promoter responsive to the APETALA3 / PISTILLATA feedback control do not contain a CArG box

    Article • Sexual Plant Reproduction, September 2000, Springer Science + Business Media

    Xuemei Chen

  159. HUA1 and HUA2 Are Two Members of the Floral Homeotic AGAMOUS Pathway

    Article • Molecular Cell, March 1999, Elsevier

    Xuemei Chen

  160. Function of the Chlamydomonas reinhardtii petD 5' untranslated region in regulating the accumulation of subunit IV of the cytochrome b6/f complex

    Article • The Plant Journal, October 1994, Wiley

    Xuemei Chen

  161. Abstract

    Article • eLife

    Xuemei Chen