All Stories

  1. Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation
  2. The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities
  3. Arabidopsis AAR2, a conserved splicing factor in eukaryotes, acts in microRNA biogenesis
  4. Use of NAD tagSeq II to identify growth phase-dependent alterations in E. coli RNA NAD + capping
  5. SPAAC-NAD-seq, a sensitive and accurate method to profile NAD + -capped transcripts
  6. Secrets of the MIR172 family in plant development and flowering unveiled
  7. Widespread occurrence of microRNA-mediated target cleavage on membrane-bound polysomes
  8. Regulation of Female Germline Specification via Small RNA Mobility in Arabidopsis
  9. Linking key steps of microRNA biogenesis by TREX-2 and the nuclear pore complex in Arabidopsis
  10. FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis
  11. HSP90 inhibitors stimulate DNAJB4 protein expression through a mechanism involving N6-methyladenosine
  12. Genome-Wide Transcript and Small RNA Profiling Reveals Transcriptomic Responses to Heat Stress
  13. NAD tagSeq reveals that NAD + -capped RNAs are mostly produced from a large number of protein-coding genes in Arabidopsis
  14. NAD + -capped RNAs are widespread in the Arabidopsis transcriptome and can probably be translated
  15. Author Correction: The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs
  16. The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs
  17. Intercellular and systemic trafficking of RNAs in plants
  18. Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation
  19. Biogenesis of a young, 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation
  20. The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing
  21. Conservation and divergence of small RNA pathways and microRNAs in land plants
  22. The THO Complex Non-Cell-Autonomously Represses Female Germline Specification through the TAS3-ARF3 Module
  23. The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status
  24. ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis
  25. The evolution of microRNAs in plants
  26. RNA-seq analysis on Arabidopsis ago1-27 mutant
  27. Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis
  28. POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites in Arabidopsis
  29. PARylation of the forkhead‐associated domain protein DAWDLE regulates plant immunity
  30. APETALA2 antagonizes the transcriptional activity of AGAMOUS in regulating floral stem cells in Arabidopsis thaliana
  31. FAR-RED ELONGATED HYPOCOTYL3 activates SEPALLATA2 but inhibits CLAVATA3 to regulate meristem determinacy and maintenance in Arabidopsis
  32. RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants
  33. Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis
  34. A partial loss-of-function mutation in an Arabidopsis RNA polymerase III subunit leads to pleiotropic defects
  35. Uridylation and adenylation of RNAs
  36. Mechanisms of microRNA turnover
  37. SUVH1, a Su(var)3–9 family member, promotes the expression of genes targeted by DNA methylation
  38. Fast-Suppressor Screening for New Components in Protein Trafficking, Organelle Biogenesis and Silencing Pathway in Arabidopsis thaliana Using DEX-Inducible FREE1-RNAi Plants
  39. Distinct and Cooperative Activities of HESO1 and URT1 Nucleotidyl Transferases in MicroRNA Turnover in Arabidopsis
  40. Synergistic and Independent Actions of Multiple Terminal Nucleotidyl Transferases in the 3’ Tailing of Small RNAs in Arabidopsis
  41. Ancient Origin and Recent Innovations of RNA Polymerase IV and V
  42. The Arabidopsis SWI2/SNF2 Chromatin Remodeler BRAHMA Regulates Polycomb Function during Vegetative Development and Directly Activates the Flowering Repressor Gene SVP
  43. Chemical Genetic Screens Using Arabidopsis thaliana Seedlings Grown on Solid Medium
  44. The Exosome and Trans-Acting Small Interfering RNAs Regulate Cuticular Wax Biosynthesis during Arabidopsis Inflorescence Stem Development
  45. Detection of Pol IV/RDR2-dependent transcripts at the genomic scale inArabidopsisreveals features and regulation of siRNA biogenesis
  46. AUXIN RESPONSE FACTOR 3integrates the functions ofAGAMOUSandAPETALA2in floral meristem determinacy
  47. Small RNAs meet their targets: When methylation defends miRNAs from uridylation
  48. Roles of small RNAs in soybean defense againstPhytophthora sojaeinfection
  49. DNA Topoisomerase 1α Promotes Transcriptional Silencing of Transposable Elements through DNA Methylation and Histone Lysine 9 Dimethylation in Arabidopsis
  50. DNA Topoisomerase I Affects Polycomb Group Protein-Mediated Epigenetic Regulation and Plant Development by Altering Nucleosome Distribution in Arabidopsis
  51. Non-coding RNAs and DNA methylation in plants
  52. Methylation protects microRNAs from an AGO1-associated activity that uridylates 5′ RNA fragments generated by AGO1 cleavage
  53. Traffic into silence: endomembranes and post-transcriptional RNA silencing
  54. Special Issue on Plant Epigenetics
  55. Small RNAs in Plants
  56. Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs
  57. Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species
  58. MicroRNAs Inhibit the Translation of Target mRNAs on the Endoplasmic Reticulum in Arabidopsis
  59. Oomycete pathogens encode RNA silencing suppressors
  60. NOT2 Proteins Promote Polymerase II–Dependent Transcription and Interact with Multiple MicroRNA Biogenesis Factors in Arabidopsis
  61. POWERDRESS and Diversified Expression of the MIR172 Gene Family Bolster the Floral Stem Cell Network
  62. Generation of a luciferase-based reporter for CHH and CG DNA methylation in Arabidopsis thaliana
  63. Nucleus and Genome: Small RNAs
  64. MicroRNA–Mediated Repression of the Seed Maturation Program during Vegetative Development in Arabidopsis
  65. Mechanisms that impact microRNA stability in plants
  66. Small RNAs in development – insights from plants
  67. RNA polymerase V-dependent small RNAs in Arabidopsis originate from small, intergenic loci including most SINE repeats
  68. A Histone Acetyltransferase Regulates Active DNA Demethylation in Arabidopsis
  69. The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element
  70. Uridylation of miRNAs by HEN1 SUPPRESSOR1 in Arabidopsis
  71. The Arabidopsis Nucleotidyl Transferase HESO1 Uridylates Unmethylated Small RNAs to Trigger Their Degradation
  72. Regulation of small RNA stability: methylation and beyond
  73. Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
  74. Plant development—a snapshot in 2012
  75. Effective Small RNA Destruction by the Expression of a Short Tandem Target Mimic in Arabidopsis
  76. Development of a luciferase-based reporter of transcriptional gene silencing that enables bidirectional mutant screening in Arabidopsis thaliana
  77. microRNA Biogenesis and Turnover in Plants
  78. AGAMOUS Terminates Floral Stem Cell Maintenance in Arabidopsis by Directly Repressing WUSCHEL through Recruitment of Polycomb Group Proteins
  79. LEUNIG and SEUSS co-repressors regulate miR172 expression in Arabidopsis flowers
  80. The plant Mediator and its role in noncoding RNA production
  81. Dynamics of histone H3 lysine 27 trimethylation in plant development
  82. ARGONAUTE10 and ARGONAUTE1 Regulate the Termination of Floral Stem Cells through Two MicroRNAs in Arabidopsis
  83. The Anaphase-Promoting Complex Is a Dual Integrator That Regulates Both MicroRNA-Mediated Transcriptional Regulation of Cyclin B1 and Degradation of Cyclin B1 during Arabidopsis Male Gametophyte Development
  84. The role of Mediator in small and long noncoding RNA production inArabidopsis thaliana
  85. Transcriptional silencing induced by Arabidopsis T-DNA mutants is associated with 35S promoter siRNAs and requires genes involved in siRNA-mediated chromatin silencing
  86. Plant microRNAs at a glance
  87. Orchestration of the Floral Transition and Floral Development in Arabidopsis by the Bifunctional Transcription Factor APETALA2
  88. siRNAs compete with miRNAs for methylation by HEN1 in Arabidopsis
  89. Small RNAs - secrets and surprises of the genome
  90. RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
  91. Intergenic transcription by RNA Polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis
  92. Small RNAs and Their Roles in Plant Development
  93. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
  94. Structural insights into mechanisms of the small RNA methyltransferase HEN1
  95. Endogenous Small RNA Pathways in Arabidopsis
  96. Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)
  97. Computational prediction of novel non-coding RNAs in Arabidopsis thaliana
  98. Criteria for Annotation of Plant MicroRNAs
  99. Degradation of microRNAs by a Family of Exoribonucleases in Arabidopsis
  100. The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis
  101. Small RNA metabolism in Arabidopsis
  102. A Silencing Safeguard: Links between RNA Silencing and mRNA Processing in Arabidopsis
  103. Small RNA-Directed Epigenetic Natural Variation in Arabidopsis thaliana
  104. DICER-LIKE2 Plays a Primary Role in Transitive Silencing of Transgenes in Arabidopsis
  105. Biochemical Activities of Arabidopsis RNA-dependent RNA Polymerase 6
  106. MicroRNA Metabolism in Plants
  107. miR172 regulates stem cell fate and defines the inner boundary of APETALA3 and PISTILLATA expression domain in Arabidopsis floral meristems
  108. A marked end
  109. The regulation of genes and genomes by small RNAs
  110. Approaches for Studying MicroRNA and Small Interfering RNA Methylation In Vitro and In Vivo
  111. Floral patterning defects induced by Arabidopsis APETALA2 and microRNA172 expression in Nicotiana benthamiana
  112. Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation inArabidopsis
  113. HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2' OH of the 3' terminal nucleotide
  114. microRNA biogenesis and function in plants
  115. Methylation Protects miRNAs and siRNAs from a 3′-End Uridylation Activity in Arabidopsis
  116. Methylation as a Crucial Step in Plant microRNA Biogenesis
  117. siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis
  118. HUA ENHANCER3 reveals a role for a cyclin-dependent protein kinase in the specification of floral organ identity in Arabidopsis
  119. A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development
  120. Posttranscriptional control of plant development
  121. PAUSED, a Putative Exportin-t, Acts Pleiotropically in Arabidopsis Development But Is Dispensable for Viability
  122. Arabidopsis HEN1
  123. A uniform system for microRNA annotation
  124. Two RNA Binding Proteins, HEN4 and HUA1, Act in the Processing of AGAMOUS Pre-mRNA in Arabidopsis thaliana
  125. CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana
  126. HUA1, a Regulator of Stamen and Carpel Identities in Arabidopsis, Codes for a Nuclear RNA Binding Protein
  127. Minimal regions in the Arabidopsis PISTILLATA promoter responsive to the APETALA3 / PISTILLATA feedback control do not contain a CArG box
  128. HUA1 and HUA2 Are Two Members of the Floral Homeotic AGAMOUS Pathway
  129. Function of the Chlamydomonas reinhardtii petD 5' untranslated region in regulating the accumulation of subunit IV of the cytochrome b6/f complex
  130. Abstract