All Stories

  1. Interference of Sulphonate Buffering Agents with E. coli Hypoxanthine-Guanine Phosphoribosyltransferase Active Site Functioning: A Crystallographic and Enzymological Study

    Article • Crystals, October 2025, MDPI AG

    Mr Vladimir Timofeev

  2. Myelin Basic Protein Attenuates Furin-Mediated Bri2 Cleavage and Postpones Its Membrane Trafficking

    Article • International Journal of Molecular Sciences, February 2024, MDPI AG

    Mr Vladimir Timofeev

  3. Designing an Efficient Biocatalyst for the Phosphoribosylation of Antiviral Pyrazine-2-carboxamide Derivatives

    Article • ACS Catalysis, February 2024, American Chemical Society (ACS)

    Mr Vladimir Timofeev

  4. Application of Protein Crystallography and Machine Learning Data for the Development of a Peptide Vaccine against African Swine Fever

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  5. Application of the Crystal Structure of the SARS-CoV-2 Spike Protein for the Development of a Peptide Vaccine against Virus

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  6. Preliminary X-ray Study of Crystals Obtained by Co-Crystallization of Hypoxanthine‒Guanine Phosphoribosyltransferase from Escherichia coli and Pyrazine-2-Carboxamide Derivatives

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  7. Search for New Potential T-Cell and B-Cell Epitopes in the Spike Protein of SARS-CoV-2

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  8. Search for Potential Epitopes in the Envelope Protein of the African Swine Fever Virus

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  9. Study of the Precrystallization Solution of Lysozyme by Accelerated Molecular Dynamics Simulation

    Article • Crystallography Reports, December 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  10. How the Hinge Region Affects Interactions between the Catalytic and β-Propeller Domains in Oligopeptidase B

    Article • Crystals, November 2023, MDPI AG

    Mr Vladimir Timofeev

  11. Study of the Formation of Precursor Clusters in an Aqueous Solution of KH2PO4 by Small-Angle X-ray Scattering and Molecular Dynamics

    Article • Crystals, November 2023, MDPI AG

    Mr Vladimir Timofeev

  12. X-ray structure of recombinant house dust mite allergen Der p 3

    Article • Mendeleev Communications, November 2023, OOO Zhurnal "Mendeleevskie Soobshcheniya"

    Mr Vladimir Timofeev

  13. An Algorithm for the Development of a Recombinant Antiherpetic Subunit Vaccine Combining the Crystal Structure Analysis, AlphaFold2-Based Modeling, and Immunoinformatics

    Article • Crystals, September 2023, MDPI AG

    Mr Vladimir Timofeev

  14. Structural Bioinformatics Study of the Structural Basis of Substrate Specificity of Purine Nucleoside Phosphorylase from Thermus thermophilus

    Article • Crystallography Reports, April 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  15. Identification of the precursor cluster in thermolysin crystallization solution by molecular dynamics methods

    Article • Mendeleev Communications, March 2023, OOO Zhurnal "Mendeleevskie Soobshcheniya"

    Mr Vladimir Timofeev

  16. Preparation, Crystallization, and Preliminary X-ray Diffraction Analysis of Recombinant House Dust Mite Allergen Der p 3 from Dermatophagoides pteronyssinus

    Article • Crystallography Reports, February 2023, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  17. Crystal Structure of Inhibitor-Bound Bacterial Oligopeptidase B in the Closed State: Similarity and Difference between Protozoan and Bacterial Enzymes

    Article • International Journal of Molecular Sciences, January 2023, MDPI AG

    Mr Vladimir Timofeev

  18. Protein Crystallography: Achievements and Challenges

    Article • Crystals, January 2023, MDPI AG

    Mr Vladimir Timofeev

  19. Comparative Analysis of the Interfaces between Monomers in the Dimers of Bacterial Histone-Like HU Proteins by the MM-GBSA Method

    Article • Crystallography Reports, December 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  20. Modeling of the Interaction of Cytochrome c with Cardiolipin

    Article • Crystallography Reports, December 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  21. Modeling the Interaction of Human Lipoxygenase LOX 15 with Free Arachidonic Acid

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, December 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  22. Study of Human Lipoxygenase by the Method of Molecular and Quantum Mechanics

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, December 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  23. Unusual Temperature Behavior of Stability of Proteinase K Dimer Formed in Crystallization Solution Defined by Molecular Dynamics

    Article • Crystals, November 2022, MDPI AG

    Mr Vladimir Timofeev

  24. Comparative structural analysis of a histone-like protein from Spiroplasma melliferum in the crystalline state and in solution

    Article • Mendeleev Communications, November 2022, OOO Zhurnal "Mendeleevskie Soobshcheniya"

    Mr Vladimir Timofeev

  25. Rational Mutagenesis in the Lid Domain of Ribokinase from E. coli Results in an Order of Magnitude Increase in Activity towards D-arabinose

    Article • International Journal of Molecular Sciences, October 2022, MDPI AG

    Mr Vladimir Timofeev

  26. Unusual Cytochrome c552 from Thioalkalivibrio paradoxus: Solution NMR Structure and Interaction with Thiocyanate Dehydrogenase

    Article • International Journal of Molecular Sciences, September 2022, MDPI AG

    Mr Vladimir Timofeev

  27. Crystallization and Preliminary X-Ray Diffraction Analysis of Recombinant Phosphoribosylpyrophosphate Synthetase I from Thermus thermophilus HB27

    Article • Crystallography Reports, July 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  28. Modeling of the Interaction of Cytochrome c with the Lipid Bilayer

    Article • Crystallography Reports, July 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  29. The neuropeptide cycloprolylglycine can form a complex with AMPA receptors

    Article • Mendeleev Communications, July 2022, OOO Zhurnal "Mendeleevskie Soobshcheniya"

    Mr Vladimir Timofeev

  30. Immunoinformatic Design of a Multivalent Peptide Vaccine Against Mucormycosis: Targeting FTR1 Protein of Major Causative Fungi

    Article • Frontiers in Immunology, May 2022, Frontiers

    Mr Vladimir Timofeev

  31. Study of the Binding Free Energy of Peptide Substrates in the Active Site of Oligopeptidase B from Serratia proteamaculans by the MM-GBSA Method

    Article • Crystallography Reports, May 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  32. The Role of Cations and Anions in the Formation of Crystallization Oligomers in Protein Solutions as Revealed by Combination of Small-Angle X-ray Scattering and Molecular Dynamics

    Article • Crystals, May 2022, MDPI AG

    Mr Vladimir Timofeev

  33. Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation

    Article • Crystals, May 2022, MDPI AG

    Mr Vladimir Timofeev

  34. Modeling the molecular dynamics of cytochrome C in aqueous and water–methanol environment

    Article • Mendeleev Communications, May 2022, OOO Zhurnal "Mendeleevskie Soobshcheniya"

    Mr Vladimir Timofeev

  35. Early Stage of Structural Changes and Molecular Dynamics of Cytochrome C in an Aqueous Solution Caused by the Addition of Methanol

    Article • Crystallography Reports, April 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  36. Effect of V23Q and K24T Mutations on the Mobility of Atoms in L-Asparaginase from Wolinella succinigenes

    Article • Crystallography Reports, April 2022, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  37. Identification of the Precursor Cluster in the Crystallization Solution of Proteinase K Protein by Molecular Dynamics Methods

    Article • Crystals, March 2022, MDPI AG

    Mr Vladimir Timofeev

  38. Computational designing of a novel subunit vaccine for human cytomegalovirus by employing the immunoinformatics framework

    Article • Journal of Biomolecular Structure and Dynamics, January 2022, Taylor & Francis

    Mr Vladimir Timofeev

  39. The Role of Cations of the Precipitant in the Interaction of Protein Molecules in the Lysozyme Oligomers in Crystallization Solutions

    Article • Crystals, December 2021, MDPI AG

    Mr Vladimir Timofeev

  40. Erratum to: Effect of the Simulation Box Size and Precipitant Concentration on the Behavior of Tetragonal Lysozyme Dimer

    Article • Crystallography Reports, December 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  41. The Crystal Structure of Nα-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding

    Article • Crystals, November 2021, MDPI AG

    Mr Vladimir Timofeev

  42. Modeling of the Complex of the N-Methyl–D-Aspartate (NMDA) Receptor with Lipids of the Postsynaptic Membrane

    Article • Crystallography Reports, November 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  43. Modeling of the Lipid Bilayer Mimicking the Inner Mitochondrial Membrane

    Article • Crystallography Reports, November 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  44. Molecular Dynamics Study of Escherichia coli Thymidine Phosphorylase in a Complex with 3'-Azidothymidine Inhibitor and Phosphate

    Article • Russian Journal of Bioorganic Chemistry, November 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  45. Molecular Dynamics Study of the Viscosity Change in the Postsynaptic Membrane upon a Variation in Its Composition

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, November 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  46. First Crystal Structure of Bacterial Oligopeptidase B in an Intermediate State: The Roles of the Hinge Region Modification and Spermine

    Article • Biology, October 2021, MDPI AG

    Mr Vladimir Timofeev

  47. Comparison of Spatial Structures and Packaging of Phosphorybosil Pyrophosphate Synthetase 2 from Thermus thermophilus HB27 in Rhombohedral and Tetragonal Crystals

    Article • Crystals, September 2021, MDPI AG

    Mr Vladimir Timofeev

  48. Free Energy Change during the Formation of Crystalline Contact between Lysozyme Monomers under Different Physical and Chemical Conditions

    Article • Crystals, September 2021, MDPI AG

    Mr Vladimir Timofeev

  49. Study of the Interaction of Sorption and Catalytic Centers in Carboxypeptidase T by X-ray Analysis

    Article • Crystals, September 2021, MDPI AG

    Mr Vladimir Timofeev

  50. Effect of Disruption of the Interface between Monomers in a Dimer on the Structural and Dynamic Properties of the HU Protein from Spiroplasma Melliferum

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, September 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  51. Molecular Dynamics of the Self-Organization of Dilinoleoyl Phosphatidylethanolamine Molecules

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, September 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  52. Three-Dimensional Structure of Recombinant Thermophilic Ribokinase from Thermus speсies 2.9 in Complex with Adenosine Diphosphate

    Article • Crystallography Reports, September 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  53. Simulation of A Bilayer Imitating the Inner Mitochondrial Membrane Using Coarse-Grained Molecular Dynamics

    Article • Journal of Surface Investigation X-ray Synchrotron and Neutron Techniques, July 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  54. Effect of the Simulation Box Size and Precipitant Concentration on the Behavior of Tetragonal Lysozyme Dimer

    Article • Crystallography Reports, May 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  55. Preparation, Crystallization, and Preliminary X-Ray Diffraction Study of Mutant Carboxypeptidase T Bearing the Hydrophilized Primary Specificity Pocket

    Article • Crystallography Reports, May 2021, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  56. Immunoinformatics analysis to design novel epitope based vaccine candidate targeting the glycoprotein and nucleoprotein of Lassa mammarenavirus (LASMV) using strains from Nigeria

    Article • Journal of Biomolecular Structure and Dynamics, March 2021, Taylor & Francis

    Mr Vladimir Timofeev

  57. Structure of the microbial carboxypeptidase T complexed with the transition state analog N-sulfamoyl-l-lysine

    Article • Biophysical Chemistry, March 2021, Elsevier

    Mr Vladimir Timofeev

  58. The comparative analysis of the properties and structures of purine nucleoside phosphorylases from thermophilic bacterium Thermus thermophilus HB27

    Article • Journal of Biomolecular Structure and Dynamics, November 2020, Taylor & Francis

    Mr Vladimir Timofeev

  59. Crystallographic Study of Mutants and Complexes of Oligopeptidase B from Serratia proteamaculans

    Article • Crystallography Reports, November 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  60. Inhibitor Targeting the Interface between Monomers of HU Protein from Spiroplasma melliferum Disrupts Conformational Dynamics and DNA-Binding Properties of the Protein

    Article • Crystallography Reports, November 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  61. Preparation, Crystallization, and Preliminary X-Ray Diffraction Study of Mutant Carboxypeptidase T Bearing the Primary Specificity Pocket and the Active-Site Loop of Carboxypeptidase B

    Article • Crystallography Reports, November 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  62. Structure-based inhibitors targeting the alpha-helical domain of the Spiroplasma melliferum histone-like HU protein

    Article • Scientific Reports, September 2020, Springer Science + Business Media

    Mr Vladimir Timofeev

  63. Features of Optical Activity in Inorganic and Organic Materials

    Article • Crystallography Reports, September 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  64. Molecular Dynamics Calculations of the Interaction Energy of Imidazole Glycerol Phosphate Dehydratase from Mycobacterium tuberculosis with Triazole Derivatives

    Article • Crystallography Reports, September 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  65. Three-Dimensional Structure of Branched-Chain Amino Acid Transaminase from Thermoproteus uzoniensis in Complex with L-Norvaline

    Article • Crystallography Reports, September 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  66. Precipitant ions influence on lysozyme oligomers stability investigated by molecular dynamics simulation at different temperatures

    Article • Journal of Biomolecular Structure and Dynamics, August 2020, Taylor & Francis

    Mr Vladimir Timofeev

  67. Molecular Packing of a Mutant of L-Asparaginase from Wolinella succinigenes in Two Crystal Modifications

    Article • Crystallography Reports, July 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  68. Features of the Three Dimensional Structure of the Mutant Form of Wolinella succinogenes L-Asparaginase in Complexes with L-Aspartic and L-Glutamic Acids

    Article • Russian Journal of Bioorganic Chemistry, March 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  69. Screening of Conditions that Facilitate Crystallization of Oligopeptidase B from Serratia Proteamaculans by Differential Scanning Fluorimetry

    Article • Crystallography Reports, March 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  70. Crystal Packing of Phosphopantetheine Adenylyltransferase from Mycobacterium tuberculosis in Two Crystal Modifications

    Article • Crystallography Reports, January 2020, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  71. The nature of the ligand’s side chain interacting with the S1'-subsite of metallocarboxypeptidase T (from Thermoactinomyces vulgaris) determines the geometry of the tetrahedral transition complex

    Article • PLOS One, December 2019, PLOS

    Dr Valerii Khalilbekovich Akparov, Mr Vladimir Timofeev

  72. The binding of precipitant ions in the tetragonal crystals of hen egg white lysozyme

    Article • Journal of Biomolecular Structure and Dynamics, November 2019, Taylor & Francis

    Mr Vladimir Timofeev

  73. Molecular dynamics complemented by site-directed mutagenesis reveals significant difference between the interdomain salt bridge networks stabilizing oligopeptidases B from bacteria and protozoa in their active conformations

    Article • Journal of Biomolecular Structure and Dynamics, November 2019, Taylor & Francis

    Mr Vladimir Timofeev

  74. Crystallization and Preliminary X-ray Diffraction Study of a Mutant of L-Asparaginase from Wolinella succinogenes

    Article • Crystallography Reports, November 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  75. Molecular Dynamics Study of Binding of Substrates Bearing Two Positively Charged Residues to Oligopeptidase B from Serratia proteamaculans

    Article • Crystallography Reports, September 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  76. Three-Dimensional Structure of a Mutant of Carboxypeptidase T from Thermoactinomyces vulgaris Bearing an Implanted S1' Subsite of Pancreatic Carboxypeptidase B Complexed with a Product Analog

    Article • Crystallography Reports, September 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  77. Dodecamers derived from the crystal structure were found in the pre-crystallization solution of the transaminase from the thermophilic bacterium Thermobaculum terrenum by small-angle X-ray scattering

    Article • Journal of Biomolecular Structure and Dynamics, August 2019, Taylor & Francis

    Mr Vladimir Timofeev

  78. Molecular Dynamics Study of Triazole Derivative Binding to the Active Site of Imidazole Glycerol Phosphate Dehydratase from Mycobacterium tuberculosis

    Article • Crystallography Reports, July 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  79. Virtual Screening Targeting Dimerization Signals of Two Mycoplasma HU Proteins Revealed Different Types of Inhibitors Interacting with Common Binding Determinants

    Article • Crystallography Reports, July 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  80. Functional characterization of PLP fold type IV transaminase with a mixed type of activity from Haliangium ochraceum

    Article • Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, June 2019, Elsevier

    Mr Vladimir Timofeev

  81. Modeling of Phosphoribosylpyrophosphate Synthetase from Thermus Thermophilus in Complex with ATP and Ribose 5-Phosphate

    Article • Crystallography Reports, January 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  82. Molecular Dynamics Study of Thymidine Phosphorylase from E. coli in the Apo Form and in Complexes with Substrates

    Article • Crystallography Reports, January 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  83. Study of the Influence of a Precipitant Cation on the Formation of Oligomers in Crystallization Solutions of Lysozyme Protein

    Article • Crystallography Reports, January 2019, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  84. Pre-crystallization phase formation of thermolysin hexamers in solution close to crystallization conditions

    Article • Journal of Biomolecular Structure and Dynamics, December 2018, Taylor & Francis

    Mr Vladimir Timofeev

  85. Mobile Loop in the Active Site of Metallocarboxypeptidases as an Underestimated Determinant of Substrate Specificity

    Article • Biochemistry (Moscow), December 2018, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  86. An explanation for the narrow carbohydrate substrate specificity of adenine phosphoribosyltransferase from Thermus thermophilus from the model of the enzyme, substrate, and magnesium cation cofactor complex

    Article • Journal of Biomolecular Structure and Dynamics, November 2018, Taylor & Francis

    Mr Vladimir Timofeev

  87. Study of the Behavior of Lysozyme Oligomers in Solutions by the Molecular Dynamics Method

    Article • Crystallography Reports, November 2018, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  88. Crystal structure of mutant carboxypeptidase T from Thermoactinomyces vulgaris with an implanted S1′ subsite from pancreatic carboxypeptidase B

    Article • Acta Crystallographica Section F Structural Biology Communications, September 2018, International Union of Crystallography

    Mr Vladimir Timofeev

  89. Crystallization and Preliminary X-ray Diffraction Study of Purine Nucleoside Phosphorylase from the Thermophilic Bacterium Thermus thermophilus Strain HB27

    Article • Crystallography Reports, September 2018, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  90. Three-Dimensional Structure of Recombinant Adenine Phosphoribosyltransferase from Thermophilic Bacterial Strain Thermus thermophilus HB27

    Article • Russian Journal of Bioorganic Chemistry, September 2018, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  91. Crystal structure ofEscherichia colipurine nucleoside phosphorylase complexed with acyclovir

    Article • Acta Crystallographica Section F Structural Biology Communications, June 2018, International Union of Crystallography

    Mr Vladimir Timofeev

  92. Crystal structure ofEscherichia colipurine nucleoside phosphorylase in complex with 7-deazahypoxanthine

    Article • Acta Crystallographica Section F Structural Biology Communications, May 2018, International Union of Crystallography

    Mr Vladimir Timofeev

  93. Structural plasticity and thermal stability of the histone-like protein from Spiroplasma melliferum are due to phenylalanine insertions into the conservative scaffold

    Article • Journal of Biomolecular Structure and Dynamics, January 2018, Taylor & Francis

    Mr Vladimir Timofeev

  94. Discovery of Selective Inhibitors of Imidazoleglycerol-Phosphate Dehydratase from Mycobacterium tuberculosis by Virtual Screening

    Article • Crystallography Reports, January 2018, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  95. Crystal structures of carboxypeptidase T complexes with transition-state analogs

    Article • Journal of Biomolecular Structure and Dynamics, November 2017, Taylor & Francis

    Mr Vladimir Timofeev

  96. Comparison of histone-like HU protein DNA-binding properties and HU/IHF protein sequence alignment

    Article • PLOS One, November 2017, PLOS

    Mr Vladimir Timofeev

  97. Application of virtual screening and molecular dynamics for the analysis of selectivity of inhibitors of HU proteins targeted to the DNA-recognition site

    Article • Crystallography Reports, November 2017, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  98. Activity modulation of the oligopeptidase B from Serratia proteamaculans by site-directed mutagenesis of amino acid residues surrounding catalytic triad histidine

    Article • Biochimie, August 2017, Elsevier

    Mr Vladimir Timofeev

  99. Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27

    Article • Crystallography Reports, July 2017, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  100. Crystal structure of recombinant phosphoribosylpyrophosphate synthetase 2 fromThermus thermophilusHB27 complexed with ADP and sulfate ions

    Article • Acta Crystallographica Section F Structural Biology Communications, May 2017, International Union of Crystallography

    Mr Vladimir Timofeev

  101. Virtual screening of selective inhibitors of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis

    Article • Crystallography Reports, May 2017, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  102. Structure of the carboxypeptidase B complex with N-sulfamoyl-L-phenylalanine – a transition state analog of non-specific substrate

    Article • Journal of Biomolecular Structure and Dynamics, April 2017, Taylor & Francis

    Mr Vladimir Timofeev

  103. Three-dimensional structure of porcine pancreatic carboxypeptidase B with an acetate ion and two zinc atoms in the active site

    Article • Crystallography Reports, March 2017, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  104. Crystallization and preliminary X-ray diffraction analysis of recombinant phosphoribosylpyrophosphate synthetase from the Thermophilic thermus thermophilus strain HB27

    Article • Crystallography Reports, January 2017, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  105. Enhanced conformational flexibility of the histone-like (HU) protein from Mycoplasma gallisepticum

    Article • Journal of Biomolecular Structure and Dynamics, December 2016, Taylor & Francis

    Mr Vladimir Timofeev

  106. Crystallization and preliminary X-ray diffraction study of recombinant ribokinase from Thermus Species 2.9

    Article • Crystallography Reports, November 2016, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  107. Protein crystallization under microgravity conditions. Analysis of the results of Russian experiments performed on the International Space Station in 2005−2015

    Article • Crystallography Reports, September 2016, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  108. Investigation of the Initial Crystallization Stage in Lysozyme Solutions by Small-Angle X-ray Scattering

    Article • Crystal Growth & Design, March 2016, American Chemical Society (ACS)

    Mr Vladimir Timofeev

  109. Three-dimensional structure of E. Coli purine nucleoside phosphorylase at 0.99 Å resolution

    Article • Crystallography Reports, March 2016, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  110. In situ study of the state of lysozyme molecules at the very early stage of the crystallization process by small-angle X-ray scattering

    Article • Crystallography Reports, January 2016, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  111. Three-dimensional structure of phosphoribosyl pyrophosphate synthetase from E. coli at 2.71 Å resolution

    Article • Crystallography Reports, January 2016, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  112. Isolation, purification, crystallization, and preliminary X-ray diffraction study of the crystals of HU protein from M. gallisepticum

    Article • Crystallography Reports, November 2015, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  113. Structure of the complex of carboxypeptidase B and N-sulfamoyl-L-arginine

    Article • Acta Crystallographica Section F Structural Biology Communications, September 2015, International Union of Crystallography

    Dr Valerii Khalilbekovich Akparov, Mr Vladimir Timofeev

  114. Crystallization and preliminary X-ray diffraction study of phosphoribosyl pyrophosphate synthetase from E. Coli

    Article • Crystallography Reports, September 2015, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  115. Crystallization and preliminary X-ray diffraction study of phosphopantetheine adenylyltransferase from M. tuberculosis crystallizing in space group P32

    Article • Crystallography Reports, September 2015, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  116. Structure of recombinant prolidase fromThermococcus sibiricusin space groupP21221

    Article • Acta Crystallographica Section F Structural Biology Communications, July 2015, International Union of Crystallography

    Mr Vladimir Timofeev

  117. Purification, crystallization, and preliminary X-ray diffraction study of purine nucleoside phosphorylase from E. coli

    Article • Crystallography Reports, July 2015, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  118. Crystallization and preliminary X-ray diffraction study of porcine carboxypeptidase B

    Article • Crystallography Reports, May 2015, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  119. Structural insights into the broad substrate specificity of carboxypeptidase T fromThermoactinomyces vulgaris

    Article • FEBS Journal, February 2015, Wiley

    Dr Valerii Khalilbekovich Akparov, Mr Vladimir Timofeev

  120. 3′-Azidothymidine in the active site ofEscherichia colithymidine phosphorylase: the peculiarity of the binding on the basis of X-ray study

    Article • Acta Crystallographica Section D Biological Crystallography, March 2014, International Union of Crystallography

    Mr Vladimir Timofeev

  121. Three-dimensional structure of thymidine phosphorylase from E. coli in complex with 3′-azido-2′-fluoro-2′,3′-dideoxyuridine

    Article • Crystallography Reports, November 2013, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  122. Three-dimensional structure of carboxypeptidase T from Thermoactinomyces vulgaris in complex with N-BOC-L-leucine

    Article • Biochemistry (Moscow), March 2013, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  123. X-ray study of the conformational changes in the molecule of phosphopantetheine adenylyltransferase fromMycobacterium tuberculosisduring the catalyzed reaction

    Article • Acta Crystallographica Section D Biological Crystallography, November 2012, International Union of Crystallography

    Mr Vladimir Timofeev

  124. Three-dimensional structure of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis in the apo form and in complexes with coenzyme A and dephosphocoenzyme A

    Article • Crystallography Reports, January 2012, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  125. Crystal growth of phosphopantetheine adenylyltransferase, carboxypeptidase t, and thymidine phosphorylase on the international space station by the capillary counter-diffusion method

    Article • Crystallography Reports, September 2011, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  126. Three-dimensional structure of recombinant carboxypeptidase T from Thermoactinomyces vulgaris without calcium ions

    Article • Crystallography Reports, July 2011, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  127. Preparation of the Crystal Complex of Phosphopantetheine Adenylyltransferase from Mycobacterium tuberculosis with Coenzyme A and Investigation of Its Three-Dimensional Structure at 2.1-Å Resolution

    Article • Crystallography Reports, November 2010, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  128. Recombinant formate dehydrogenase from Arabidopsis thaliana: Preparation, crystal growth in microgravity, and preliminary X-ray diffraction study

    Article • Crystallography Reports, September 2010, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  129. Preparation, crystallization, and preliminary X-ray diffraction study of mutant carboxypeptidase T containing the primary specificity pocket of carboxypeptidase B

    Article • Crystallography Reports, September 2010, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  130. X-ray investigation of gene-engineered human insulin crystallized from a solution containing polysialic acid

    Article • Acta Crystallographica Section F Structural Biology and Crystallization Communications, February 2010, International Union of Crystallography

    Mr Vladimir Timofeev

  131. Protein crystal growth on the Russian segment of the International Space Station

    Article • Crystallography Reports, September 2009, Pleiades Publishing Ltd

    Mr Vladimir Timofeev

  132. Structure of the homodimer of uridine phosphorylase from Salmonella typhimurium in the native state at 1.9 Å resolution

    Article • Crystallography Reports, November 2007, Pleiades Publishing Ltd

    Dr Azat Gabdulkhakov, Mr Vladimir Timofeev

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