All Stories

  1. MODIMO: Workshop on Multi-Omics Data Integration for Modelling Biological Systems

    Article • October 2021, ACM (Association for Computing Machinery)

    Ph.D. Vincenzo VB Bonnici

  2. APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks

    Article • Bioinformatics, April 2016, Oxford University Press (OUP)

    Ph.D. Vincenzo VB Bonnici

  3. On the variable ordering in subgraph isomorphism algorithms

    Article • IEEE/ACM Transactions on Computational Biology and Bioinformatics, January 2016, Institute of Electrical & Electronics Engineers (IEEE)

    Ph.D. Vincenzo VB Bonnici

  4. NetMatchStar: an enhanced Cytoscape network querying app

    Article • F1000Research, November 2015, Faculty of 1000, Ltd.

    Ph.D. Vincenzo VB Bonnici

  5. NetMatchStar: an enhanced Cytoscape network querying app

    Article • F1000Research, August 2015, Faculty of 1000, Ltd.

    Professor Gary D Bader, Ph.D. Vincenzo VB Bonnici, Fabio Rinnone, Prof Alfredo Ferro

  6. Recurrence Distance Distributions in Computational Genomics

    Article • American Journal of Bioinformatics and Computational Biology, January 2015, Columbia International Publishing

    Ph.D. Vincenzo VB Bonnici

  7. DT-Web: a web-based application for drug-target interaction and drug combination prediction through domain-tuned network-based inference

    Article • BMC Systems Biology, January 2015, Springer Science + Business Media

    Ph.D. Vincenzo VB Bonnici

  8. Comprehensive Reconstruction and Visualization of Non-Coding Regulatory Networks in Human

    Article • Frontiers in Bioengineering and Biotechnology, December 2014, Frontiers

    Ph.D. Vincenzo VB Bonnici

  9. A knowledge base for the discovery of function, diagnostic potential and drug effects on cellular and extracellular miRNAs

    Article • BMC Genomics, January 2014, Springer Science + Business Media

    Ph.D. Vincenzo VB Bonnici

  10. GRAPES: A Software for Parallel Searching on Biological Graphs Targeting Multi-Core Architectures

    Article • PLoS ONE, October 2013, PLOS

    Ph.D. Vincenzo VB Bonnici

  11. A subgraph isomorphism algorithm and its application to biochemical data

    Article • BMC Bioinformatics, January 2013, Springer Science + Business Media

    Ph.D. Vincenzo VB Bonnici

  12. Enhancing Graph Database Indexing by Suffix Tree Structure

    Article • January 2010, Springer Science + Business Media

    Ph.D. Vincenzo VB Bonnici