Prof. Tero Aittokallio
Professor, Life Sciences
My co-authors include
Comprehensive Drug Testing of Patient-derived Conditionally Reprogrammed Cells from Cas...
Drug response prediction by inferring pathway-response associations with kernelized Bay...
Multi-Omics Studies towards Novel Modulators of Influenza A Virus-Host Interaction
Stronger pre-clinical statistics by optimal animal matching
Transcriptional response networks for elucidating mechanisms of action of multitargeted...
Drug Discovery Today
Systematic Identification of MicroRNAs That Impact on Proliferation of Prostate Cancer ...
Identification of selective cytotoxic and synthetic lethal drug responses in triple neg...
Methods for High-Throughput Drug Combination Screening and Synergy Scoring
Relevance Rank Platform (RRP) for Functional Filtering of High Content Protein–Protein ...
Molecular & Cellular Proteomics
Identification of drug candidates and repurposing opportunities through compound–target...
Expert Opinion on Drug Discovery
From drug response profiling to target addiction scoring in cancer cell models
Disease Models & Mechanisms
What is synergy? The Saariselkä agreement revisited
Frontiers in Pharmacology
Label-free quantitative phosphoproteomics with novel pairwise abundance normalization r...
Impact of normalization methods on high-throughput screening data with high hit rates a...
Abstract 1700: Dasatinib and everolimus show synergistic growth inhibition with paclita...
Abstract 5328: Protein phosphatase 2A activity is a major determinant of therapy respon...
Systematic Mapping of Kinase Addiction Combinations in Breast Cancer Cells by Integrati...
Chemistry & Biology
Network pharmacology applications to map the unexplored target space and therapeutic po...
Natural Product Reports
Searching for Drug Synergy in Complex Dose–Response Landscapes Using an Interaction Pot...
Computational and Structural Biotechnology Journal
Regularized Machine Learning in the Genetic Prediction of Complex Traits
Ovarian Endometriosis Signatures Established through Discovery and Directed Mass Spectr...
Journal of Proteome Research
Castration Induces Up-Regulation of Intratumoral Androgen Biosynthesis and Androgen Rec...
American Journal Of Pathology
Quantitative scoring of differential drug sensitivity for individually optimized antica...
Novel Lignan and Stilbenoid Mixture Shows Anticarcinogenic Efficacy in Preclinical PC-3...
Making Sense of Large-Scale Kinase Inhibitor Bioactivity Data Sets: A Comparative and I...
Journal of Chemical Information and Computer Sciences
Network Pharmacology Strategies Toward Multi-Target Anticancer Therapies: From Computat...
Current Pharmaceutical Design
A Two-Step Learning Approach for Solving Full and Almost Full Cold Start Problems in Dy...
PhosFox: a bioinformatics tool for peptide-level processing of LC-MS/MS-based phosphopr...
Target Inhibition Networks: Predicting Selective Combinations of Druggable Targets to B...
PLoS Computational Biology
Genetic variants and their interactions in disease risk prediction – machine learning a...
Predicting drug–target interactions through integrative analysis of chemogenetic assays...
Parallel Feature Selection for Regularized Least-Squares
A multilevel layout algorithm for visualizing physical and genetic interaction networks...
The rocky road to personalized medicine: computational and statistical challenges
Pravastatin-induced improvement in coronary reactivity and circulating ATP and ADP leve...
Frontiers in Physiology
Wrapper-based selection of genetic features in genome-wide association studies through ...
Algorithms for Molecular Biology
Fast and parallelized greedy forward selection of genetic variants in Genome-wide assoc...
Quantitative Subcellular Proteome and Secretome Profiling of Influenza A Virus-Infected...
Quantitative maps of genetic interactions in yeast - Comparative evaluation and integra...
BMC Systems Biology
PolyAlign: A Versatile LC-MS Data Alignment Tool for Landmark-Selected and -Automated Use
International Journal of Proteomics
Mahalanobis distance screening of Arabidopsis mutants with chlorophyll fluorescence
Early suppression of immune response pathways characterizes children with prediabetes i...
Journal of Autoimmunity
Genome-Wide Scoring of Positive and Negative Epistasis through Decomposition of Quantit...
An update on clinical proteomics in Alzheimer’s research
Journal of Neurochemistry
Understanding sleep-disordered breathing through mathematical modelling
Sleep Medicine Reviews
Filtering strategies for improving protein identification in high-throughput MS/MS studies
Probe-level estimation improves the detection of differential splicing in Affymetrix ex...
A practical comparison of methods for detecting transcription factor binding sites in C...
Predicting Quantitative Genetic Interactions by Means of Sequential Matrix Approximation
Overnight variability in transcutaneous carbon dioxide predicts vascular impairment in ...
Alignment of LC-MS images, with applications to biomarker discovery and protein identif...
Overnight features of transcutaneous carbon dioxide measurement as predictors of metabo...
Artificial Intelligence in Medicine
Missing value imputation improves clustering and interpretation of gene expression micr...
Can carotid body perfusion act as a respiratory controller?
Journal of Theoretical Biology
Computer-assisted identification of multitrace electrophoretic patterns in differential...
Inspiratory flow shape clustering: An automated method to monitor upper airway performa...
Computer Methods and Programs in Biomedicine
Non-invasive respiratory monitoring during wakefulness and sleep in pre- and postmenopa...
Respiratory Physiology & Neurobiology
Sleep quality, daytime sleepiness and fasting insulin levels in women with chronic obst...
Medroxyprogesterone improves nocturnal breathing in postmenopausal women with chronic o...
Statistical Methods for Identifying Conserved Residues in Multiple Sequence Alignment
Statistical Applications in Genetics and Molecular Biology
Genetic Feature Learning Algorithm for Fluorescence Fingerprinting of Plants
Computational Strategies for Analyzing Data in Gene Expression Microarray Experiments
Journal of Bioinformatics and Computational Biology
Effect of medroxyprogesterone on inspiratory flow shapes during sleep in postmenopausal...
Respiratory Physiology & Neurobiology
Hierarchical grid transformation for image warping in the analysis of two-dimensional e...
Climacteric vasomotor symptoms do not predict nocturnal breathing abnormalities in post...
Automated detection of differentially expressed fragments in mRNA differential display
A model of a snorer's upper airway
Analysis of Inspiratory Flow Shapes in Patients With Partial Upper-Airway Obstruction D...
Analysis of similarity of electrophoretic patterns in mRNA differential display
Module Finding Approaches for Protein Interaction Networks
Automated Pattern Ranking in Differential Display Data Analysis
Predicting Gene Expression from Combined Expression and Promoter Profile Similarity wit...