All Stories

  1. A comparative study reveals the relative importance of prokaryotic and eukaryotic proton pump rhodopsins in a subtropical marginal sea

    Article • ISME Communications, August 2023, Springer Science + Business Media

    Dr Senjie Lin

  2. Role of diatom-derived oxylipins in organic phosphorus recycling during coastal diatom blooms in the northern South China Sea

    Article • The Science of The Total Environment, August 2023, Elsevier

    Dr Senjie Lin

  3. In Situ Molecular Ecological Analyses Illuminate Distinct Factors Regulating Formation and Demise of a Harmful Dinoflagellate Bloom

    Article • Microbiology Spectrum, June 2023, ASM Journals

    Dr Senjie Lin

  4. Phosphate limitation and ocean acidification co-shape phytoplankton physiology and community structure

    Article • Nature Communications, May 2023, Springer Science + Business Media

    Dr Senjie Lin

  5. Phytoplankton and Microzooplankton Community Structure and Assembly Mechanisms in Northwestern Pacific Ocean Estuaries with Environmental Heterogeneity and Geographic Segregation

    Article • Microbiology Spectrum, April 2023, ASM Journals

    Dr Senjie Lin

  6. Molecular phylogeny of the spiny‐surfaced species of the dinoflagellate Prorocentrum with the description of P. thermophilum sp. nov. and P. criophilum sp. nov. (Prorocentrales, Dinophyceae)

    Article • Journal of Phycology, January 2023, Wiley

    Dr Senjie Lin

  7. An ancient enzyme finds a new home: Prevalence and neofunctionalization of trypsin in marine phytoplankton

    Article • Journal of Phycology, December 2022, Wiley

    Dr Senjie Lin

  8. Isolation, identification and toxicity of three strains of Heterocapsa (Dinophyceae) in a harmful event in Fujian, China

    Article • Harmful Algae, December 2022, Elsevier

    Dr Senjie Lin

  9. A grazing-driven positive nutrient feedback loop and active sexual reproduction underpin widespread Noctiluca green tides

    Article • ISME Communications, October 2022, Springer Science + Business Media

    Dr Senjie Lin

  10. Active meiosis during dinoflagellate blooms: A ‘sex for proliferation’ hypothesis

    Article • Harmful Algae, October 2022, Elsevier

    Dr Senjie Lin

  11. Transcriptomic and metabolic signatures of diatom plasticity to light fluctuations

    Article • PLANT PHYSIOLOGY, September 2022, Oxford University Press (OUP)

    Dr Senjie Lin

  12. Dissipation of a Polykrikos geminatum Bloom after Wind Events in Pearl River Estuary

    Article • Water, July 2022, MDPI AG

    Dr Senjie Lin

  13. Trypsin is a coordinate regulator of N and P nutrients in marine phytoplankton

    Article • Nature Communications, July 2022, Springer Science + Business Media

    Dr Senjie Lin

  14. Energy metabolism and genetic information processing mark major transitions in the life history of Scrippsiella acuminata (Dinophyceae)

    Article • Harmful Algae, July 2022, Elsevier

    Dr Senjie Lin

  15. Building Consensus around the Assessment and Interpretation of Symbiodiniaceae Diversity

    Article • June 2022, MDPI AG

    Dr Senjie Lin

  16. Functional differentiation and complementation of alkaline phosphatases and choreography of DOP scavenging in a marine diatom

    Article • Molecular Ecology, April 2022, Wiley

    Dr Senjie Lin

  17. Phytate as a Phosphorus Nutrient with Impacts on Iron Stress-Related Gene Expression for Phytoplankton: Insights from the Diatom Phaeodactylum tricornutum

    Article • Applied and Environmental Microbiology, January 2022, ASM Journals

    Dr Senjie Lin

  18. Diversity Distribution, Driving Factors and Assembly Mechanisms of Free-Living and Particle-Associated Bacterial Communities at a Subtropical Marginal Sea

    Article • Microorganisms, November 2021, MDPI AG

    Dr Senjie Lin

  19. An Ancient Enzyme Finds a New Home: Prevalence and Neofunctionalization of Trypsin in Marine Phytoplankton

    Article • November 2021, Research Square

    Dr Senjie Lin

  20. Spatial organization of dinoflagellate genomes: Novel insights and remaining critical questions

    Article • Journal of Phycology, September 2021, Wiley

    Dr Senjie Lin

  21. SPX-related genes regulate phosphorus homeostasis in the marine phytoplankton, Phaeodactylum tricornutum

    Article • Communications Biology, June 2021, Springer Science + Business Media

    Dr Senjie Lin

  22. Nitrogen availability improves the physiological resilience of coral endosymbiont Cladocopium goreaui to high temperature

    Article • Journal of Phycology, May 2021, Wiley

    Dr Senjie Lin

  23. Roles of Alkaline Phosphatase PhoA in Algal Metabolic Regulation under Phosphorus‐replete Conditions

    Article • Journal of Phycology, April 2021, Wiley

    Dr Senjie Lin

  24. Abundant synthesis of long‐chain polyunsaturated fatty acids in Eutreptiella sp. (Euglenozoa) revealed by chromatographic and transcriptomic analyses

    Article • Journal of Phycology, January 2021, Wiley

    Dr Senjie Lin

  25. Physiological and transcriptomic responses to N-deficiency and ammonium: Nitrate shift in Fugacium kawagutii (Symbiodiniaceae)

    Article • The Science of The Total Environment, January 2021, Elsevier

    Dr Senjie Lin

  26. Methylation Pattern and Expression Dynamics of Methylase and Photosystem Genes Under varying light Intensities in Fugacium kawagutii (Symbiodiniaceae)

    Article • Journal of Phycology, October 2020, Wiley

    Dr Senjie Lin

  27. Characterizing ciguatoxin (CTX)- and Non-CTX-producing strains of Gambierdiscus balechii using comparative transcriptomics

    Article • The Science of The Total Environment, May 2020, Elsevier

    Dr Senjie Lin

  28. High throughput sequencing of 18S rRNA and its gene to characterize a Prorocentrum shikokuense (Dinophyceae) bloom

    Article • Harmful Algae, April 2020, Elsevier

    Dr Senjie Lin

  29. Microplastic exposure represses the growth of endosymbiotic dinoflagellate Cladocopium goreaui in culture through affecting its apoptosis and metabolism

    Article • Chemosphere, April 2020, Elsevier

    Dr Senjie Lin

  30. RNA-seq profiling of Fugacium kawagutii reveals strong responses in metabolic processes and symbiosis potential to deficiencies of iron and other trace metals

    Article • The Science of The Total Environment, February 2020, Elsevier

    Dr Senjie Lin

  31. Nuclear Gene Transformation in the Dinoflagellate Oxyrrhis marina

    Article • Microorganisms, January 2020, MDPI AG

    Dr Senjie Lin

  32. Genome Improvement and Core Gene Set Refinement of Fugacium kawagutii

    Article • Microorganisms, January 2020, MDPI AG

    Dr Senjie Lin

  33. Comparative metatranscriptomic profiling and microRNA sequencing to reveal active metabolic pathways associated with a dinoflagellate bloom

    Article • The Science of The Total Environment, January 2020, Elsevier

    Dr Senjie Lin

  34. Insights into protist diversity and biogeography in intertidal sediments sampled across a range of spatial scales

    Article • Limnology and Oceanography, November 2019, Wiley

    Dr Senjie Lin

  35. Non-Conventional Metal Ion Cofactor Requirement of Dinoflagellate Alkaline Phosphatase and Translational Regulation by Phosphorus Limitation

    Article • Microorganisms, August 2019, MDPI AG

    Dr Senjie Lin

  36. Initial evidence of functional siRNA machinery in dinoflagellates

    Article • Harmful Algae, January 2019, Elsevier

    Dr Senjie Lin

  37. Isolation of an algicidal bacterium and its effects against the harmful-algal- bloom dinoflagellate Prorocentrum donghaiense (Dinophyceae)

    Article • Harmful Algae, December 2018, Elsevier

    Dr Senjie Lin

  38. Morphology and molecular phylogeny of epizoic araphid diatoms on marine zooplankton, including Pseudofalcula hyalina gen. & comb. nov. (Fragilariophyceae, Bacillariophyta)

    Article • Journal of Phycology, July 2018, Wiley

    Dr Fernando Gomez, Dr Senjie Lin

  39. Molecular phylogeny suggests the affinity of the planktonic diatoms Climacodium and Bellerochea (Lithodesmiales, Mediophyceae)

    Article • Diatom Research, July 2018, Taylor & Francis

    Dr Fernando Gomez, Dr Senjie Lin

  40. Circadian and irradiance effects on expression of antenna protein genes and pigment contents in dinoflagellate Prorocentrum donghaiense (Dinophycae)

    Article • Harmful Algae, May 2018, Elsevier

    Dr Senjie Lin

  41. Morphology and Molecular Phylogeny of Peritrich Ciliate Epibionts on Pelagic Diatoms: Vorticella oceanica and Pseudovorticella coscinodisci sp. nov. (Ciliophora, Peritrichia)

    Article • Protist, April 2018, Elsevier

    Dr Fernando Gomez, Dr Senjie Lin

  42. Metatranscriptome analysis reveals environmental and diel regulation of a Heterosigma akashiwo (raphidophyceae) bloom

    Article • Environmental Microbiology, February 2018, Wiley

    Dr Senjie Lin

  43. The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation

    Article • Environmental Microbiology, December 2017, Wiley

    Dr Senjie Lin

  44. Transcriptomic and physiological analyses of the dinoflagellate Karenia mikimotoi reveal non-alkaline phosphatase-based molecular machinery of ATP utilisation

    Article • Environmental Microbiology, September 2017, Wiley

    Dr Senjie Lin

  45. Molecular phylogeny suggests transfer of Hemidiscus into Actinocyclus (Coscinodiscales, Coscinodiscophyceae)

    Article • Diatom Research, January 2017, Taylor & Francis

    Dr Fernando Gomez, Dr Senjie Lin

  46. Phytoplankton phosphorus nutrition

    Article • Journal of Phycology, January 2016, Wiley

    Dr Senjie Lin