All Stories

  1. Dihydroceramide- and ceramide-profiling provides insights into human cardiometabolic disease etiology

    Article • Nature Communications, February 2022, Springer Science + Business Media

    Dr Rafael RC Cuadrat, Fabian Eichelmann

  2. SARS-CoV-2 infection dynamics revealed by wastewater sequencing analysis and deconvolution

    Article • December 2021, Cold Spring Harbor Laboratory Press

    Dr Rafael RC Cuadrat

  3. Obesity Partially Mediates the Diabetogenic Effect of Lowering LDL Cholesterol

    Article • Diabetes Care, November 2021, American Diabetes Association

    jordi merino, Dr Rafael RC Cuadrat

  4. Cardiovascular disease biomarkers derived from circulating cell-free DNA methylation

    Article • November 2021, Cold Spring Harbor Laboratory Press

    Dr Rafael RC Cuadrat

  5. Identification and Characterization of Human Observational Studies in Nutritional Epidemiology on Gut Microbiomics for Joint Data Analysis

    Article • Nutrients, September 2021, MDPI AG

    Dr Rafael RC Cuadrat

  6. Immunobiotic Lactobacilli Improve Resistance of Respiratory Epithelial Cells to SARS-CoV-2 Infection

    Article • Pathogens, September 2021, MDPI AG

    Dr Rafael RC Cuadrat

  7. Flavonoid-Modifying Capabilities of the Human Gut Microbiome—An In Silico Study

    Article • Nutrients, August 2021, MDPI AG

    Dr Rafael RC Cuadrat

  8. Putative mobilized colistin resistance genes in the human gut microbiome

    Article • BMC Microbiology, July 2021, Springer Science + Business Media

    Dr Rafael RC Cuadrat

  9. Advanced glycation end-products, measured as skin autofluorescence, associate with vascular stiffness in diabetic, pre-diabetic and normoglycemic individuals: a cross-sectional study

    Article • Cardiovascular Diabetology, June 2021, Springer Science + Business Media

    Dr Rafael RC Cuadrat, Fabian Eichelmann

  10. Dolosigranulum pigrum Modulates Immunity against SARS-CoV-2 in Respiratory Epithelial Cells

    Article • Pathogens, May 2021, MDPI AG

    Dr Rafael RC Cuadrat

  11. Putative mobilized colistin resistance genes in the human gut microbiome

    Article • January 2021, Cold Spring Harbor Laboratory Press

    Dr Rafael RC Cuadrat

  12. Nasopharyngeal microbial communities of patients infected with SARS-COV-2 that developed COVID-19

    Article • December 2020, Cold Spring Harbor Laboratory Press

    Dr Rafael RC Cuadrat

  13. Desaturase Activity and the Risk of Type 2 Diabetes and Coronary Artery Disease: A Mendelian Randomization Study

    Article • Nutrients, July 2020, MDPI AG

    Dr Rafael RC Cuadrat

  14. Replication of 15 loci involved in human plasma protein N-glycosylation in 4802 samples from four cohorts

    Article • Glycobiology, June 2020, Oxford University Press (OUP)

    Dr Rafael RC Cuadrat

  15. Global ocean resistome revealed: Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples

    Article • GigaScience, May 2020, Oxford University Press (OUP)

    Dr Rafael RC Cuadrat

  16. The structure of microbial populations in Nelore GIT reveals inter-dependency of methanogens in feces and rumen

    Article • Journal of Animal Science and Biotechnology, February 2020, Springer Science + Business Media

    Dr Rafael RC Cuadrat

  17. Global ocean resistome revealed: exploring Antibiotic Resistance Genes (ARGs) abundance and distribution on TARA oceans samples through machine learning tools

    Article • September 2019, Cold Spring Harbor Laboratory Press

    Dr Rafael RC Cuadrat

  18. Recovering Genomics Clusters of Secondary Metabolites from Lakes Using Genome-Resolved Metagenomics

    Article • Frontiers in Microbiology, February 2018, Frontiers

    Dr Rafael RC Cuadrat

  19. Homology Inference Based on a Reconciliation Approach for the Comparative Genomics of Protozoa

    Article • Evolutionary Bioinformatics, January 2018, SAGE Publications

    Dr Rafael RC Cuadrat

  20. Distribution and Classification of Serine β-Lactamases in Brazilian Hospital Sewage and Other Environmental Metagenomes Deposited in Public Databases

    Article • Frontiers in Microbiology, November 2016, Frontiers

    Dr Rafael RC Cuadrat

  21. Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo—Brazil)

    Article • OMICS A Journal of Integrative Biology, February 2016, Mary Ann Liebert Inc

    Dr Rafael RC Cuadrat

  22. Metagenomic Analysis of Upwelling-Affected Brazilian Coastal Seawater Reveals Sequence Domains of Type I PKS and Modular NRPS

    Article • International Journal of Molecular Sciences, November 2015, MDPI AG

    Dr Rafael RC Cuadrat

  23. An Orthology-Based Analysis of Pathogenic Protozoa Impacting Global Health: An Improved Comparative Genomics Approach with Prokaryotes and Model Eukaryote Orthologs

    Article • OMICS A Journal of Integrative Biology, August 2014, Mary Ann Liebert Inc

    Dr Rafael RC Cuadrat

  24. Towards a Comprehensive Search of Putative Chitinases Sequences in Environmental Metagenomic Databases

    Article • Natural Science, January 2014, Scientific Research Publishing, Inc,

    Dr Rafael RC Cuadrat

  25. Detecting distant homologies on protozoans metabolic pathways using scientific workflows

    Article • International Journal of Data Mining and Bioinformatics, January 2010, Inderscience Publishers

    Dr Rafael RC Cuadrat

  26. OrthoSearch

    Article • January 2008, ACM (Association for Computing Machinery)

    Dr Rafael RC Cuadrat

  27. ProtozoaDB: dynamic visualization and exploration of protozoan genomes

    Article • Nucleic Acids Research, December 2007, Oxford University Press (OUP)

    Dr Rafael RC Cuadrat