All Stories

  1. Cell type markers indicate distinct contributions of decidual stromal cells and natural killer cells in preeclampsia

    Article • Reproduction, November 2022, Bioscientifica

    Mr Mehrad Mahmoudian

  2. Histone H3K4me3 breadth in hypoxia reveals endometrial core functions and stress adaptation linked to endometriosis

    Article • iScience, May 2022, Elsevier

    Mr Mehrad Mahmoudian

  3. A Crowdsourcing Approach to Develop Machine Learning Models to Quantify Radiographic Joint Damage in Rheumatoid Arthritis

    Article • October 2021, Cold Spring Harbor Laboratory Press

    Mr Mehrad Mahmoudian

  4. Stable Iterative Variable Selection

    Article • Bioinformatics, July 2021, Oxford University Press (OUP)

    Mr Mehrad Mahmoudian

  5. Differential ATAC-seq and ChIP-seq peak detection using ROTS

    Article • NAR Genomics and Bioinformatics, June 2021, Oxford University Press (OUP)

    Mr Mehrad Mahmoudian

  6. Community Assessment of the Predictability of Cancer Protein and Phosphoprotein Levels from Genomics and Transcriptomics

    Article • Cell Systems, July 2020, Elsevier

    Mr Mehrad Mahmoudian, Prof Gajendra PS Raghava

  7. Transcriptomic responses to hypoxia in endometrial and decidual stromal cells

    Article • Reproduction, April 2020, Bioscientifica

    Mr Mehrad Mahmoudian

  8. Easy-to-use tool for evaluating the elevated acute kidney injury risk against reduced cardiovascular disease risk during intensive blood pressure control

    Article • Journal of Hypertension, March 2020, Wolters Kluwer Health

    Mr Mehrad Mahmoudian

  9. Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease

    Article • Leukemia, February 2020, Springer Science + Business Media

    Mr Mehrad Mahmoudian

  10. Transcriptomic responses to hypoxia in endometrial and decidual stromal cells

    Article • December 2019, Cold Spring Harbor Laboratory Press

    Mr Mehrad Mahmoudian

  11. Data-Independent Acquisition Mass Spectrometry in Metaproteomics of Gut Microbiota—Implementation and Computational Analysis

    Article • Journal of Proteome Research, December 2019, American Chemical Society (ACS)

    Mr Mehrad Mahmoudian

  12. Prediction of complication related death after radical cystectomy for bladder cancer with machine learning methodology

    Article • Scandinavian Journal of Urology, September 2019, Taylor & Francis

    Mr Mehrad Mahmoudian, Antti Salminen

  13. A predictive model of overall survival in patients with metastatic castration-resistant prostate cancer

    Article • F1000Research, May 2019, Faculty of 1000, Ltd.

    Mr Mehrad Mahmoudian

  14. A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection

    Article • Nature Communications, October 2018, Springer Science + Business Media

    Mr Mehrad Mahmoudian

  15. A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection

    Article • April 2018, Cold Spring Harbor Laboratory Press

    Mr Mehrad Mahmoudian

  16. A DREAM Challenge to Build Prediction Models for Short-Term Discontinuation of Docetaxel in Metastatic Castration-Resistant Prostate Cancer

    Article • JCO Clinical Cancer Informatics, November 2017, American Society of Clinical Oncology (ASCO)

    Mr Mehrad Mahmoudian

  17. Reply to Tuomas Mirtti and Tero Aittokallio's Letter to the Editor re: Fatemeh Seyednasrollah, Mehrad Mahmoudian, Liisa Rautakorpi, et al. How Reliable are Trial-based Prognostic Models in Real-world Patients with Metastatic Castration-resistant Prosta...

    Article • European Urology, September 2017, Elsevier

    Mr Mehrad Mahmoudian

  18. How Reliable are Trial-based Prognostic Models in Real-world Patients with Metastatic Castration-resistant Prostate Cancer?

    Article • European Urology, May 2017, Elsevier

    Mr Mehrad Mahmoudian

  19. Predictive survival model for metastatic castration-resistant prostate cancer

    Article • F1000Research, November 2016, Faculty of 1000, Ltd.

    MD Liisa K Rautakorpi, Mr Mehrad Mahmoudian

  20. Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data

    Article • The Lancet Oncology, November 2016, Elsevier

    Christoph F Kurz, Tapio Pahikkala, Mr Mehrad Mahmoudian