All Stories

  1. KnetMiner: a comprehensive approach for supporting evidence‐based gene discovery and complex trait analysis across species

    Article • Plant Biotechnology Journal, April 2021, Wiley

    Ajit Singh, Marco Brandizi

  2. KnetMiner - Intelligent search and visualisation of connected data to explain complex traits and diseases

    Article • April 2020, Cold Spring Harbor Laboratory Press

    John doonan, Ajit Singh, Marco Brandizi

  3. Review of "Qeios in a nutshell"

    Article • Qeios, April 2019, Qeios Ltd

    Marco Brandizi

  4. The best of Linked Data and Property Graph: the KnetMiner Use Case about Plant Biology

    Article • Journal of Integrative Bioinformatics, August 2018, De Gruyter

    Marco Brandizi, Ajit Singh

  5. Orchestrating differential data access for translational research: a pilot implementation

    Article • BMC Medical Informatics and Decision Making, March 2017, Springer Science + Business Media

    Marco Brandizi

  6. ArrayExpress update—trends in database growth and links to data analysis tools

    Article • Nucleic Acids Research, November 2012, Oxford University Press (OUP)

    Marco Brandizi

  7. graph2tab, a library to convert experimental workflow graphs into tabular formats

    Article • Bioinformatics, May 2012, Oxford University Press (OUP)

    Marco Brandizi

  8. The BioSample Database (BioSD) at the European Bioinformatics Institute

    Article • Nucleic Acids Research, November 2011, Oxford University Press (OUP)

    Marco Brandizi

  9. Knowledge sharing and collaboration in translational research, and the DC-THERA Directory

    Article • Briefings in Bioinformatics, October 2011, Oxford University Press (OUP)

    Marco Brandizi

  10. ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments

    Article • Nucleic Acids Research, November 2010, Oxford University Press (OUP)

    Marco Brandizi

  11. ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

    Article • Bioinformatics, August 2010, Oxford University Press (OUP)

    Marco Brandizi

  12. DC-ATLAS: a systems biology resource to dissect receptor specific signal transduction in dendritic cells

    Article • Immunome Research, January 2010, Springer Science + Business Media

    Maria Gabriella Torcia, Dr Irene Stefanini, Marco Brandizi

  13. ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression

    Article • Nucleic Acids Research, January 2009, Oxford University Press (OUP)

    Marco Brandizi

  14. The First RSBI (ISA-TAB) Workshop: “Can a Simple Format Work for Complex Studies?”

    Article • OMICS A Journal of Integrative Biology, June 2008, Mary Ann Liebert Inc

    Marco Brandizi

  15. The Genopolis Microarray Database

    Article • BMC Bioinformatics, March 2007, Springer Science + Business Media

    Marco Brandizi