All Stories

  1. Molecular Dynamics and Optimization Studies of Horse Prion Protein Wild Type and Its S167D Mutant

    Article • Zoonotic Diseases, August 2024, MDPI AG

    Dr/Prof Jiapu Zhang

  2. Optimization-based Molecular Dynamics Studies of SARS-CoV-2 Molecular Structures

    Article • January 2023, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  3. Molecular Dynamics Studies of the Bufallo Prion Protein Structured Region at Higher Temperatures

    Article • The Open Bioinformatics Journal, December 2020, Bentham Science Publishers

    Dr/Prof Jiapu Zhang

  4. Molecular dynamics studies of dog prion protein wild-type and its D159N mutant

    Article • Journal of Biomolecular Structure and Dynamics, June 2020, Taylor & Francis

    Dr/Prof Jiapu Zhang

  5. The polar clasps of a bank vole PrP(168–176) prion protofibril revisiting

    Article • Journal of Molecular Modeling, April 2019, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  6. Molecular Dynamics Analyses of Prion Protein Structures

    Article • January 2018, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  7. A review on the salt bridge ASP177-ARG163 (O–N) of wild-type rabbit prion protein

    Article • Journal of Biomolecular Structure and Dynamics, January 2016, Taylor & Francis

    Dr/Prof Jiapu Zhang

  8. Mathematical Formulas for Prion All Cross-Structures Listed in the Protein Data Bank

    Article • Medicinal Chemistry, January 2016, OMICS Publishing Group

    Dr/Prof Jiapu Zhang

  9. Mathematical Formulas for Some Cross-Β Structures of Human Aβ Protein

    Article • Medicinal Chemistry, January 2016, OMICS Publishing Group

    Dr/Prof Jiapu Zhang

  10. Mathematical Formulas for Prion All Cross-Structures Listed in the Protein Data Bank

    Article • SSRN Electronic Journal, January 2016, Elsevier

    Dr/Prof Jiapu Zhang

  11. Molecular dynamics studies on the buffalo prion protein

    Article • Journal of Biomolecular Structure and Dynamics, July 2015, Taylor & Francis

    Dr/Prof Jiapu Zhang

  12. A Complete List of Kernels Used in Support Vector Machines

    Article • Biochemistry & Pharmacology Open Access, January 2015, OMICS Publishing Group

    Dr/Prof Jiapu Zhang

  13. Molecular Structures and Structural Dynamics of Prion Proteins and Prions

    Article • January 2015, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  14. A Survey and a Molecular Dynamics Study on the (Central) Hydrophobic Region of Prion Proteins

    Article • Current Pharmaceutical Biotechnology, November 2014, Bentham Science Publishers

    Dr/Prof Jiapu Zhang

  15. Molecular dynamics studies on the NMR structures of rabbit prion protein wild type and mutants: surface electrostatic charge distributions

    Article • Journal of Biomolecular Structure and Dynamics, August 2014, Taylor & Francis

    Dr/Prof Jiapu Zhang

  16. Molecular dynamics studies on the NMR and X-ray structures of rabbit prion proteins

    Article • Journal of Theoretical Biology, February 2014, Elsevier

    Dr/Prof Jiapu Zhang

  17. Molecular dynamics studies on 3D structures of the hydrophobic region PrP(109-136)

    Article • Acta Biochimica et Biophysica Sinica, April 2013, Oxford University Press (OUP)

    Dr/Prof Jiapu Zhang

  18. Design and evaluation of protein kinase inhibitors using ensemble docking and induced-fit optimization of active site

    Article • Medicinal Chemistry, January 2013, OMICS Publishing Group

    Dr/Prof Jiapu Zhang

  19. Computational Potential Energy Minimization Studies on the Prion AGAAAAGA Amyloid Fibril Molecular Structures

    Article • September 2012, IntechOpen

    Dr/Prof Jiapu Zhang

  20. The LBFGS quasi-Newtonian method for molecular modeling prion AGAAAAGA amyloid fibrils

    Article • Natural Science, January 2012, Scientific Research Publishing, Inc,

    Dr/Prof Jiapu Zhang

  21. Computational Studies of the Structural Stability of Rabbit Prion Protein Compared to Human and Mouse Prion Proteins

    Article • December 2011, IntechOpen

    Dr/Prof Jiapu Zhang

  22. The Structural Stability of Wild-type Horse Prion Protein

    Article • Journal of Biomolecular Structure and Dynamics, October 2011, Taylor & Francis

    Dr/Prof Jiapu Zhang

  23. A novel canonical dual computational approach for prion AGAAAAGA amyloid fibril molecular modeling

    Article • Journal of Theoretical Biology, September 2011, Elsevier

    Dr/Prof Jiapu Zhang

  24. Optimal atomic-resolution structures of prion AGAAAAGA amyloid fibrils

    Article • Journal of Theoretical Biology, June 2011, Elsevier

    Dr/Prof Jiapu Zhang

  25. Molecular Dynamics Studies on the Structural Stability of Wild-type Dog Prion Protein

    Article • Journal of Biomolecular Structure and Dynamics, June 2011, Taylor & Francis

    Dr/Prof Jiapu Zhang

  26. Comparison studies of the structural stability of rabbit prion protein with human and mouse prion proteins

    Article • Journal of Theoretical Biology, January 2011, Elsevier

    Dr/Prof Jiapu Zhang

  27. Studies on the structural stability of rabbit prion probed by molecular dynamics simulations of its wild-type and mutants

    Article • Journal of Theoretical Biology, May 2010, Elsevier

    Dr/Prof Jiapu Zhang

  28. Optimal molecular structures of prion AGAAAAGA amyloid fibrils formatted by simulated annealing

    Article • Journal of Molecular Modeling, April 2010, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  29. Studies on the Structural Stability of Rabbit Prion Probed by Molecular Dynamics Simulations

    Article • Journal of Biomolecular Structure and Dynamics, October 2009, Taylor & Francis

    Dr/Prof Jiapu Zhang

  30. A multidimensional descent method for global optimization

    Article • Optimization, July 2009, Taylor & Francis

    Dr/Prof Jiapu Zhang

  31. Local Optimization Method with Global Multidimensional Search

    Article • Journal of Global Optimization, June 2005, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  32. Optimization approach for clustering datasets with weights

    Article • Optimization Methods and Software, April 2005, Taylor & Francis

    Dr/Prof Jiapu Zhang

  33. Comparative analysis of the cutting angle and simulated annealing methods in global optimization

    Article • Optimization, August 2003, Taylor & Francis

    Dr/Prof Jiapu Zhang

  34. Article • Annals of Operations Research, January 2001, Springer Science + Business Media

    Dr/Prof Jiapu Zhang

  35. The discrete gradient evolutionary strategy method for global optimization

    Article • Institute of Electrical & Electronics Engineers (IEEE)

    Dr/Prof Jiapu Zhang